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2024-05-19 17:11:26, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_014223623             782 bp    mRNA    linear   PLN 02-JAN-2024
DEFINITION  Bipolaris maydis ATCC 48331 uncharacterized protein
            (COCC4DRAFT_196375), partial mRNA.
ACCESSION   XM_014223623
VERSION     XM_014223623.1
DBLINK      BioProject: PRJNA295860
            BioSample: SAMN00113370
KEYWORDS    RefSeq.
SOURCE      Bipolaris maydis ATCC 48331
  ORGANISM  Bipolaris maydis ATCC 48331
            Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
            Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae;
            Pleosporaceae; Bipolaris.
REFERENCE   1  (bases 1 to 782)
  AUTHORS   Ohm,R.A., Feau,N., Henrissat,B., Schoch,C.L., Horwitz,B.A.,
            Barry,K.W., Condon,B.J., Copeland,A.C., Dhillon,B., Glaser,F.,
            Hesse,C.N., Kosti,I., LaButti,K., Lindquist,E.A., Lucas,S.,
            Salamov,A.A., Bradshaw,R.E., Ciuffetti,L., Hamelin,R.C., Kema,G.H.,
            Lawrence,C., Scott,J.A., Spatafora,J.W., Turgeon,B.G., de Wit,P.J.,
            Zhong,S., Goodwin,S.B. and Grigoriev,I.V.
  TITLE     Diverse lifestyles and strategies of plant pathogenesis encoded in
            the genomes of eighteen Dothideomycetes fungi
  JOURNAL   PLoS Pathog. 8 (12), E1003037 (2012)
   PUBMED   23236275
REFERENCE   2  (bases 1 to 782)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-DEC-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 782)
  AUTHORS   Ohm,R.A., Otillar,R., Martin,J., Schackwitz,W., Grimwood,J.,
            Salamov,A., Sun,H., Lowry,S., LaButti,K., Han,J., Copeland,A.,
            Lindquist,E., Lucas,S., Barry,K., Schmutz,J., Condon,B.J., Leng,Y.,
            Wu,D., Bushley,K.E., MohdZainudin,N., Xue,C., Wang,R., Dhillon,B.,
            Tu,Z.J., Steffenson,B.J., Baker,S., Zhong,S., Turgeon,B.G. and
            Grigoriev,I.V.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2012) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_014024927).
            
            ##Metadata-START##
            Organism Display Name :: Cochliobolus heterostrophus ATCC 48331
            GOLD Stamp ID         :: Gi08794
            ##Metadata-END##
            COMPLETENESS: incomplete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Bipolaris maydis ATCC 48331"
                     /mol_type="mRNA"
                     /strain="ATCC 48331"
                     /culture_collection="ATCC:48331"
                     /db_xref="taxon:665024"
                     /chromosome="Unknown"
     gene            1..>782
                     /locus_tag="COCC4DRAFT_196375"
                     /db_xref="GeneID:25841795"
     CDS             48..782
                     /locus_tag="COCC4DRAFT_196375"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_014079098.1"
                     /db_xref="GeneID:25841795"
                     /db_xref="InterPro:IPR001424"
                     /db_xref="InterPro:IPR006121"
                     /db_xref="JGIDB:CocheC4_1_196375"
                     /translation="
MTVTPFETIFAVPMTCQSCINDIEGSLHQLSGINKVTANLKEQLVSIEGTAAPSAIVEAIQATGRDAVLRGSGKSDSAAVCILESHAPQVENKVRGLVRMVEVSPGMTIVDLSIRGLSPGTYHATVRESGNISEGPESTGGIWELGQSQKETKACRGIFGTVQVGKGGVGSVFLDKPIHIWEVIGRSIVVAREQDGKFDKKDADTLVGVIARSAGVWDNDKTVCSCSGKTVWQEREEQRDRGML"
     misc_feature    69..746
                     /locus_tag="COCC4DRAFT_196375"
                     /note="copper, zinc superoxide dismutase; Region:
                     PLN02957"
                     /db_xref="CDD:215516"
ORIGIN      
acagtcgagccatctggcattaatataccgatttcactcttttcgccatgacggtaacgccctttgaaacgatattcgcagtgcccatgacctgtcagtcgtgcatcaatgacatcgagggttccctacatcagttgagtggtatcaacaaagtgactgccaacctcaaggagcagttagtatctatcgagggcacagcagcaccgtcggccattgtagaggcgattcaggctactggccgtgatgctgttctgcgggggtcgggcaagtcagacagtgcagcggtctgcattctagaatcacacgcgccgcaggtggagaacaaggttcgcggcctggtgcgcatggtagaggtttcccctggtatgacgattgtggacttgagtataagagggttgtcacctggaacctatcatgctacagtacgtgagtcgggaaacatttccgagggacctgaatcgactggtgggatttgggaactcgggcagtcacaaaaagagaccaaggcttgtcgaggcatcttcggaaccgttcaggtcggaaagggtggagtaggatcggtgtttctcgacaagcctatccacatctgggaagtgattggacgcagcattgtggttgcgagagagcaggacggcaagtttgacaagaaggatgcggacacgctagttggggtcattgcacgcagtgcgggcgtatgggataacgacaagacggtatgctcgtgttcgggcaagacggtgtggcaggagcgcgaggagcagcgcgatcgcggcatgctgtga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]