LOCUS       XM_014171192            6946 bp    mRNA    linear   VRT 23-MAY-2025
DEFINITION  PREDICTED: Salmo salar potassium channel subfamily T member 1
            (LOC106585221), transcript variant X1, mRNA.
ACCESSION   XM_014171192
VERSION     XM_014171192.2
DBLINK      BioProject: PRJNA788898
KEYWORDS    RefSeq.
SOURCE      Salmo salar (Atlantic salmon)
  ORGANISM  Salmo salar
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii;
            Salmoniformes; Salmonidae; Salmoninae; Salmo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_059465) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 7, 2022 this sequence version replaced XM_014171192.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_905237065.1-RS_2025_05
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 05/16/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6946
                     /organism="Salmo salar"
                     /mol_type="mRNA"
                     /db_xref="taxon:8030"
                     /chromosome="ssa24"
     gene            1..6946
                     /gene="LOC106585221"
                     /note="potassium channel subfamily T member 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 4 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:106585221"
     CDS             495..4238
                     /gene="LOC106585221"
                     /codon_start=1
                     /product="potassium channel subfamily T member 1 isoform
                     X1"
                     /protein_id="XP_014026667.1"
                     /db_xref="GeneID:106585221"
                     /translation="

MAGAKLTPSPSEIDPDVKTEATKTPEEPTWVNPLKPIRTMGSFGSDAGQRYQEEYSMDSTNAQVQVEFYVNENTFKERLKLFFIKNQRSSLRIRLFNFSLKLLTCALYVIRVALDDPEQVTGVCVNCQNRTSTATAESTEITEINWELIFWVNRRVPVWAIQVTVALISFLEAMLLTYLSYKGNIWEQMFQISFILEMINTVPFIITIFWPPLRNIFIPVFLNCWLAKCALENMINDLHRAIQRTHSAMFNQVLILICTLLCLVFTGACGIQHLERAGKNLTLFNSLYFCIVTFSTVGYGDVTPHIWPSQLLVVILICVALVVLPLQFEELAYLWMERQKSGGNYSRHRAQTEKHAVLCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPTEMDIQVRRILQIPLWSQRVIYLQGSALKDTDLMRAKMDDAEACFILSSRNEVDRTAADHQTILRAWAVKDFAPNCPLYVQILKPENKFHVKFADHVVCEEEFKYAMLALNCVCPATSTLVTLLVHTSRGQEGQLSPEQWQRTYGRCSGNEVYHIRLCDSKFFGEYDGKSFTYASFHAHKKYGVCLIGVKREDNKSILLNPGPRHIMSAPDTCYYINITKEENSAFIFKQEEKDKKGMPVTGLYDAPSRLPVHSIIASMVDQATFYGTVAMDLQNPADPPEDCSKLTLPTENGAGSRRPSIAPVLEIADSSSILPCDLLSDQSEDETNHSDEEGSSVSDFVKGYPPNSPYIGSSPTLCHLLPQKASFCCLRLDKGCRHNSFEDAKAYGFKNKLIIVSAETAGNGLYNFIVPLRAYYRPRKELNPIVLLLDYPPDNHFLEAICCFPMVYFMAGTIDNLDNLLQCGIIYADNLVVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLSIITELTHPSNMRFMQFRAKDCYSLALSKLEKIERDKGSNLAFMFRLPFAAGRVFSISMLDTLLYQSFVKDYMIPIARLLLGLDTTPGSGYLCAMKVTEEDLWIRTYGRLFQKLCSSSAEIPIGIYRTESHMFSSSESQVSINVENTGGDDQRNNRRESWKEKTAQRNSTTSDQSEHPLLRKKSLQWARRLSRKNTKAPSRTERISQQRLNLYRRSERQELSELVKNRMKHLGLPTVGYEDVANLTASDVMNRVNLGYLQELQGISEHPLREETRTGANTDEMNDHQNTLSYVLINPPPDTMLELNDIVYIIRSDPLAGPDVPEDAAQGQSGGGRTRQDFGTETRDETHL"

     misc_feature    1296..1490
                     /gene="LOC106585221"
                     /note="Ion channel; Region: Ion_trans_2; pfam07885"
                     /db_xref="CDD:462301"
     misc_feature    1950..2234
                     /gene="LOC106585221"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; Region: BK_channel_a; pfam03493"
                     /db_xref="CDD:460947"
     polyA_site      6946
                     /gene="LOC106585221"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

aaccttcctgcggggacccaccgatcttgtaaaggttattaattcataatggggtaaagacactttacactacaaaactgttaatacacattatattttggtgcacagaatgacagctgtggcaatgtgcagtgatcaaaataaatctttgatcatgcccccatttgcacatcttgcaaattatgtaacaattagtacagctacactagcaacagaggcacgctggtttgatgacgtcttgcggctgagatgcaatggacctcacatctccgaaggatggagtgctgctcaataacaataagctcccagcactttctcacatgattgtgtgatgcagaaaggaatggaaaacaagtctacctcggtctatattgccgcagaagtgcgttcaggatgcagttttgaatttcagtcgctccataggctggtattgacaactgaggggtaacatattggtcattctcggctgggggtaacttgggagagggtggacgatggcaggcgctaaactcacgccgtctccttcggagatagacccagacgtcaagaccgaggcgacgaaaacaccggaggagccgacttgggtcaacccgttgaagccgatacggacgatgggctcttttgggagtgatgctgggcaaaggtatcaggaggagtacagtatggactctaccaacgcccaggtgcaggtggagttctatgtgaatgaaaacaccttcaaggagaggctcaagctgttcttcatcaaaaaccaaaggtcaagcctaaggatccgtctgtttaacttctccttgaagctgttgacgtgtgccctttacgtcatcagagtggctctggacgaccctgaacaggtcactggagtatgtgtcaactgtcagaatagaacaagcacagccacagcagaatccacagaaatcacagaaatcaactgggagttgattttctgggtgaacagaagggttcctgtctgggcgatacaggtgaccgtggccttaatcagtttcctggaggcaatgctcctcacatatctcagctacaaggggaatatctgggagcagatgttccagatctccttcatcctggagatgattaataccgtgccatttataattactatcttctggccgccgttgagaaacatcttcatcccagtgtttctcaactgctggttagccaagtgtgccctggagaatatgattaacgatctccatcgtgccatccagaggacccactctgccatgttcaaccaggtcctcatacttatctgcacccttctctgtctggtcttcactggggcgtgtggtatccagcatctagagagggccggaaagaacctgactctgttcaactctctgtatttctgcattgtcaccttctctacggtgggctatggtgacgtcacacctcatatctggccttctcagctgctggtggtcattctcatctgtgtggccctcgtggtgctcccgctacagtttgaggagttggcctatctgtggatggagcgtcagaagtcaggagggaactacagcagacaccgggcccagacagagaagcatgctgtcctgtgcgtcagctctctgaagatagacttgctcatggacttcctcaacgagttctacgctcatcctagattacaggactactatgtcgtgatcctctgtcctacagagatggacatccaggtgcgtcgtatcctccagatccccctgtggtcccagagggtcatctatctccagggctcagcactcaaagacacagacctcatgagggccaagatggatgatgcagaagcctgttttatcctgagcagtaggaacgaggtggaccgcactgctgctgaccaccagaccatactgagagcctgggctgtgaaggactttgccccaaactgccccctgtatgtccagatcctcaaaccagagaacaaattccatgtaaagtttgctgatcatgtggtctgtgaggaggaattcaagtatgccatgctggctctgaactgtgtatgtccagccacatccacactggtcacactcctggtgcacacctccagaggacaggagggccagctgtcaccagagcagtggcagaggacgtatggacgttgctctgggaacgaggtctaccacatccgtctgtgcgacagcaagttcttcggggagtacgacgggaagagtttcacctacgcctccttccacgcacacaaaaagtatggtgtgtgtctgatcggggtgaagagggaagacaacaagagcatcctgctgaacccaggtcctcgccacatcatgtccgccccagacacctgctactacatcaacatcaccaaggaagagaattccgcgttcatattcaaacaggaggagaaagacaagaagggcatgccggtgaccgggctgtatgacgccccctccaggctgcctgtacacagcatcatcgccagcatggttgatcaggccactttttatgggacggtagccatggacctccagaacccggcggaccccccagaggactgcagcaagctgaccctgcctacagagaacggggctgggagcagacggcccagcattgcccccgtcctggagatagctgactcctcctccattttgccctgcgacctgctcagtgaccaatcagaggacgagaccaaccactcagacgaggagggctcgtcggtgtcagactttgtgaaaggataccctcccaactccccatacattggcagctctccaaccctgtgccatctcctacctcagaaagcctcattctgctgccttcggctggacaagggttgcagacacaacagttttgaggatgccaaggcctatggttttaagaacaagctgatcatagtatccgcggagacggcagggaacggcctttataacttcatcgtccctctacgtgcttactaccgccccagaaaagagctcaaccctattgtactgctactagactacccgcctgacaaccacttcctagaagccatctgctgtttcccaatggtctacttcatggccggaaccatagataacctggacaatctgctacagtgtggcatcatctatgccgataacctggtggtggtggacaaggagagcaccatgagtgctgaggaggactatatggcagatgccaagactatcgtcaacgtacagaccatgttcaggctgttccccagtctcagtatcatcaccgagctgacccacccctccaacatgaggtttatgcagttcagggctaaggattgctactccctggctctctccaagctagagaagatagagcgtgataagggttccaacctggccttcatgttccgcctgccgttcgctgcaggcagagtgttcagtatcagtatgctggatacgctgctctaccagtcatttgtaaaggactatatgattcccatagcaagacttttactaggcctggataccacaccagggtctggttacctatgtgcaatgaaggtgacagaggaggacctgtggatcaggacgtatggcaggttattccaaaagctgtgttcttccagtgcagagattccaataggcatctaccgtacagagtcacacatgttctcctcctcagagtctcaagtatccatcaacgtagagaacactggtggtgacgaccagagaaacaatcgtcgcgagtcgtggaaggagaaaacagctcagcggaactccaccaccagcgaccaatcagaacatccgttgctgaggaagaagagcctccagtgggcacggcgtctgagccgtaagaacaccaaggcaccgagtcgcaccgagcggatctcccagcagcgcctcaacttgtaccggcgctccgagagacaggagctgtctgagctggtcaagaaccgcatgaagcacctaggcttacccactgtcggatacgaggatgttgctaatcttactgcgagtgatgtcatgaaccgagtaaatctaggatatttacaagagttgcagggaatttcagagcatccgttaagagaagagaccagaacaggggcaaacacagatgagatgaacgatcaccagaacactctgtcctacgttctcatcaacccccctccagacaccatgctggagctcaatgacattgtctacattatccggtccgacccgctggcggggcccgacgtgcccgaggatgcggctcaggggcagagcggcggcggccggacgaggcaggactttggcacagagaccagggatgagacccacctctgaaatcccctcgcccccctggcaccctcgaacctctcgcccccttgtctcaccacccccgaacctcttgcccccttgtctcaccgcctttgcacgatacattctatttgtgccatacaaggggaagatccccactgcccttgcccacccttaccttccaatccccctccaccctgtgtcagacttacagagagacacgtgtcactgagctgctatgggaggatgcatgaagagtgcctcgtcattacctaacctaaccccttagagagagcatcagacacaaagactcagacatggccctctttgcaaaagatagaacatgaacaatgcaccagtcgatggaaacatactggtaaccaaccaaaggagaggagagacagattatgtcggaggtcatgtgatgctctgaatatttagaggtttgtttgatttagctcgtcggcatactaggtgggtggagcttgcttgcactttagcaccaatagaaaggtgtcaaaagggcaaactctacccaaatggctggcctgcgaactacaccaagcacacttggcatgtgtgtgtgtgtagactgtgtgaatatcagttgcaaaatcaagtcatgtacagaaattgttattccttaacaagaattcctggcagtattcatacacatcaatcatgaaagtacatgagaacttattattttccctatgagcacaacccactgggcccagacgtcaattcaacatctattccacgttggttcaacgtaatttcattagaattatgtgaaaacagcatgtggccagtgggaagacttttataagcaatttttttaaacaccatcttttattgctcattctgtatgacatttttttttctcgaatatcatgctatttgttattaaaaagtatagaatacttaatggattgatgaaccttaataaattacgccatgcacctacgtcattctatttgtgccatacagtttctggttcttctttatgtatcagtcaatgttctacgaaagccaatgctcaatcattccacatttctgacaggactttgttctactgtaatgaataatctttcacagctgtttacagtggcatccctatgttatgaacacttgttatcagtacttattttgcacaataagacacaggcatagttaaagtgatagttcactccaaaatgaacatgttttcagatatcaaaagtaatctgatgttaagatgagttggagtgaactattacttgaagtctgttaatatggccagtacctgggcttggagtgcagtgttgcaagctgccttccaatatggcatttcacttgtacatgcatcacttgtacagtaaatgtagtattgtgtgtgtgctttatatattttaataattatttatctgttgtatttctgatagtgtttgcttggactaatatgtgtggttatatcattgttaacattttttatccgcattgtttggttcagtgttcttttggtcattattagtcaaatgaaaacaaatgggacttgaaatatttttgcactaagctctgtggttgttaatagagcattatagcatgaccctttaacccgaaactttaactgtacaacaaaatactttagtattcgcacagtctccatacagtcagaagtgttatatatcaactttaagggctgtattcaatccgatccgctttagacgacatccgcgtagcagttgtttttcggtgtcagaggtggaactgtgttagagctgtcaaatccacaaacagcttctggcattatacctaaagaggacattgccattggctgttcccaatttagcggagacggcattcactgtaaacactgcatatggcggctcaatcggaaattacctttacatttctatcgcggaatctgtaaagattgaatagagccctaggcctttgttaagtacatttgcaaagttttaaatgatcattgtcattgtaaacagaatatattttgatatgtgccatttctgctcgtttgttataaaatgtaatagggaagtagttctgaacatgcattgcctgattgcatgaatgagattaagttgatagaaaggttagataggaaaaaaagtgggtaaagtcaggcttttacattattttgcagtttgaagatctctggagtagtccttgatgtgttttgggatgtaatgcaatgtgtccccactcccattgaagtactgtatgtatgtgtagataaaatatgttccatactagccaggcccccagaagggcagtttacagatcatcacctcttgtgtcctcccccctcatcattgttgtatgtgaacggaaccccaagggaattcccttattggagaagttcagtaaaaaaatatgtttttgaagttcatactgtaatatagaaaggggcatgcaaacacaaaaagcatgttttgagagaaagcttgccaaaccagatatgttttcctacatttaggtgacctgtgtgaagtatcacaactagaaaattaatcatatctcccgcttgttatttgtcagcatatcatttgatatctttatatgggaccatgcatgtcctccagacaaaatcttctgtttacctttatcatatttttagttaattgtcaaaaaggtttgatccattttgtactttttcttattccgaagtatgtgtacttctctaccatgatgtaaaatatgaacaataaatgctgcatgcagccggaaacatt

//