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2024-04-24 04:17:17, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_014100710             615 bp    mRNA    linear   PLN 29-DEC-2023
DEFINITION  Trichoderma virens Gv29-8 uncharacterized protein
            (TRIVIDRAFT_222554), partial mRNA.
ACCESSION   XM_014100710
VERSION     XM_014100710.1
DBLINK      BioProject: PRJNA264113
            BioSample: SAMN02744059
KEYWORDS    RefSeq.
SOURCE      Trichoderma virens Gv29-8
  ORGANISM  Trichoderma virens Gv29-8
            Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
            Sordariomycetes; Hypocreomycetidae; Hypocreales; Hypocreaceae;
            Trichoderma.
REFERENCE   1  (bases 1 to 615)
  AUTHORS   Kubicek,C.P., Herrera-Estrella,A., Seidl-Seiboth,V., Martinez,D.A.,
            Druzhinina,I.S., Thon,M., Zeilinger,S., Casas-Flores,S.,
            Horwitz,B.A., Mukherjee,P.K., Mukherjee,M., Kredics,L.,
            Alcaraz,L.D., Aerts,A., Antal,Z., Atanasova,L.,
            Cervantes-Badillo,M.G., Challacombe,J., Chertkov,O., McCluskey,K.,
            Coulpier,F., Deshpande,N., von Dohren,H., Ebbole,D.J.,
            Esquivel-Naranjo,E.U., Fekete,E., Flipphi,M., Glaser,F.,
            Gomez-Rodriguez,E.Y., Gruber,S., Han,C., Henrissat,B., Hermosa,R.,
            Hernandez-Onate,M., Karaffa,L., Kosti,I., Le Crom,S., Lindquist,E.,
            Lucas,S., Lubeck,M., Lubeck,P.S., Margeot,A., Metz,B., Misra,M.,
            Nevalainen,H., Omann,M., Packer,N., Perrone,G., Uresti-Rivera,E.E.,
            Salamov,A., Schmoll,M., Seiboth,B., Shapiro,H., Sukno,S.,
            Tamayo-Ramos,J.A., Tisch,D., Wiest,A., Wilkinson,H.H., Zhang,M.,
            Coutinho,P.M., Kenerley,C.M., Monte,E., Baker,S.E. and
            Grigoriev,I.V.
  TITLE     Comparative genome sequence analysis underscores mycoparasitism as
            the ancestral life style of Trichoderma
  JOURNAL   Genome Biol. 12 (4), R40 (2011)
   PUBMED   21501500
REFERENCE   2  (bases 1 to 615)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (28-DEC-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 615)
  AUTHORS   Aerts,A., Kubicek,C.P., Herrera-Estrella,A., Seidl,V., Le Crom,S.,
            Martinez,D.A., Druzhinina,I.S., Zeilinger,S., Casas-Flores,S.,
            Horwitz,B.A., Mukherjee,P.K., Mukherjee,M., Kredics,L.,
            Alcaraz,L.D., Antal,Z., Atanasova,L., Cervantes-Badillo,M.G.,
            Challacombe,J., Chertkov,O., McCluskey,K., Coulpier,F.,
            Deshpande,N., von Doehren,H., Ebbole,D.J., Esquivel-Naranjo,E.U.,
            Fekete,E., Flipphi,M., Glaser,F., Gomez-Rodriguez,E.Y., Gruber,S.,
            Han,C., Henrissat,B., Hermosa,R., Hernandez-Onate,M., Karaffa,L.,
            Kosti,I., Lindquist,E., Lucas,S., Lubeck,M., Lubeck,P.S.,
            Margeot,A., Metz,B., Misra,M., Nevalainen,H., Omann,M., Packer,N.,
            Perrone,G., Uresti-Rivera,E.E., Salamov,A., Schmoll,M., Seiboth,B.,
            Shapiro,H., Sukno,S., Tamayo-Ramos,J.A., Thon,M., Tisch,D.,
            Wiest,A., Wilkinson,H.H., Zhang,M., Coutinho,P.M., Kenerley,C.M.,
            Monte,E., Baker,S.E. and Grigoriev,I.V.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2011) US DOE Joint Genome Institute, 2800
            Mitchell Drive, Walnut Creek, CA 94598-1698, USA
REFERENCE   4  (bases 1 to 615)
  AUTHORS   Bristow,J., Rubin,E., Lucas,S., Glavina del Rio,T., Dalin,E.,
            Tice,H., Bruce,D., Barry,K., Zhang,M., Shapiro,H., Pitluck,S.,
            Baker,S.E., Bruno,K.S. and Kubicek,C.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUL-2007) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_014013701).
            
            ##Metadata-START##
            Organism Display Name :: Trichoderma virens Gv29-8
            GOLD Stamp ID         :: Gi00783
            ##Metadata-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Trichoderma virens Gv29-8"
                     /mol_type="mRNA"
                     /strain="Gv29-8"
                     /db_xref="taxon:413071"
                     /chromosome="Unknown"
     gene            <1..>615
                     /locus_tag="TRIVIDRAFT_222554"
                     /db_xref="GeneID:25791682"
     CDS             1..615
                     /locus_tag="TRIVIDRAFT_222554"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_013956185.1"
                     /db_xref="GeneID:25791682"
                     /db_xref="JGIDB:TriviGv29_8_2_222554"
                     /translation="
MKFNSAAIVAILAYTTLALPTPSPGKTDVGKVDLESRNGKMDVGKVDLERRNGKMDVGKVDLERRNGKMDVGKVDLERRNGKMDVGKVDLERRNGKMDVGKVDLERRNGKMDVGKVDLERRNGKMDVGKVDLERRNGKMDVGKVDLERRNGKMDVGKVDLERRNGKMDVGKVDLERRNGKMDVGKVDLERRNGKTDVSNVEDKY"
ORIGIN      
atgaagttcaactccgctgctattgtagccatcttggcctacaccaccttagctctgccaacgccatccccaggcaaaaccgatgttggcaaagttgatcttgagagccgaaatggcaagatggatgtcggcaaggttgaccttgaacgacgaaacggcaagatggatgttggcaaggttgatcttgaacgtcgaaacggcaagatggatgtcggcaaagttgatcttgagcgtcgaaacggcaagatggatgtcggcaaggttgaccttgaacgacgaaacggcaagatggatgtcggcaaggttgaccttgaacgacgaaacggcaagatggatgtcggcaaggttgaccttgaacgtcgaaacggcaagatggatgttggcaaggttgatcttgaacgtcgaaatggtaagatggatgttggcaaggttgatcttgaacgacgaaacggcaagatggatgtcggcaaggttgaccttgaacgtcgaaacggcaagatggatgttggcaaggttgaccttgaacgtcgaaatggtaagatggatgttggtaaggttgatcttgagcgtcgaaacggcaagacagacgtcagcaatgtcgaagacaaatattaa
//

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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]