2025-04-02 18:10:53, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS XM_014080473 597 bp mRNA linear PLN 29-DEC-2023 DEFINITION Ogataea parapolymorpha DL-1 Peptidyl-prolyl cis-trans isomerase D (HPODL_00517), partial mRNA. ACCESSION XM_014080473 VERSION XM_014080473.1 DBLINK BioProject: PRJNA264114 BioSample: SAMN02981294 KEYWORDS RefSeq. SOURCE Ogataea parapolymorpha DL-1 ORGANISM Ogataea parapolymorpha DL-1 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Pichiales; Pichiaceae; Ogataea. REFERENCE 1 (bases 1 to 597) AUTHORS Ravin,N.V., Mardanov,A.V., Eldarov,M.A., Kadnikov,V.V., Beletsky,A.V., Zvereva,M.I., Smekalova,E.M., Dontsova,O.A. and Skryabin,K.G. TITLE Genome sequence of the methylotrophic yeast Hansenula polymorpha DL1 JOURNAL Unpublished REFERENCE 2 (bases 1 to 597) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (28-DEC-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 597) AUTHORS Mardanov,A.V., Kadnikov,V.V. and Beletsky,A.V. TITLE Direct Submission JOURNAL Submitted (25-OCT-2013) Lab of Molecular Cloning, Centre 'Bioengineering' RAS, Prosp. 60-let Oktyabrya, bld. 7-1, Moscow 117312, Russia COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_027864). COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..597 /organism="Ogataea parapolymorpha DL-1" /mol_type="mRNA" /strain="DL-1" /type_material="holotype of Candida parapolymorpha" /db_xref="taxon:871575" /chromosome="III" /geo_loc_name="Russia: Moscow" gene <1..>597 /locus_tag="HPODL_00517" /db_xref="GeneID:25769988" CDS 1..597 /locus_tag="HPODL_00517" /EC_number="5.2.1.8" /codon_start=1 /product="Peptidyl-prolyl cis-trans isomerase D" /protein_id="XP_013935948.1" /db_xref="GeneID:25769988" /db_xref="GO:0003755" /db_xref="GO:0005783" /db_xref="GO:0005788" /db_xref="GO:0006457" /translation="
MKFPLAFLFFFLCTVMAQQSPKITHTVYFDITEGEGEDAHHLGRIVLGLFGEVVPKTVENFYQLAISDDPKLGYKGSKFHRVIPNFMIQGGDFTRGDGTGGKSIYGAKFEDENFELKHEGPGYLSMANAGKDTNGSQFFITTVKTPWLDGKHVVFGKVLDGMDTVKLIESTKTGFQNRPVRPIVISDAGEIKVTKDEL"
misc_feature 79..567 /locus_tag="HPODL_00517" /note="cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug...; Region: cyclophilin; cl00197" /db_xref="CDD:469651" misc_feature order(241..243,247..249,256..261,265..267,379..384, 409..411,415..417,439..444,454..456) /locus_tag="HPODL_00517" /note="active site" /db_xref="CDD:238194" ORIGIN
atgaagtttccgctagcatttctgttcttctttttgtgcacagtcatggcccagcagtctccaaagatcacacacaccgtttactttgacatcacagagggcgagggagaagacgcccaccacctcggccgcattgtccttggtctatttggcgaggtggtgccaaagacagtcgagaatttctaccaattggccatttccgacgaccctaagttgggctacaagggatccaagttccacagagtcattcctaactttatgattcaaggaggtgacttcactcgaggcgacggaaccggaggcaaatcgatctacggggctaagttcgaggacgagaactttgagctcaagcacgagggcccaggctatctgtcaatggcaaatgcagggaaagacaccaacggctcgcaattcttcatcaccaccgtgaaaacgccatggcttgacggaaagcacgtggtcttcggtaaggtgctcgacggaatggacacggtcaagctcattgagtccaccaagacaggtttccagaatcgtcctgtccggccgattgtcatctcggacgcaggcgaaatcaaagtcaccaaagacgagctgtag
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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