LOCUS       XM_014077977             747 bp    mRNA    linear   PLN 29-DEC-2023
DEFINITION  Ogataea parapolymorpha DL-1 Mitochondrial nuclease (HPODL_01466),
            partial mRNA.
ACCESSION   XM_014077977
VERSION     XM_014077977.1
DBLINK      BioProject: PRJNA264114
            BioSample: SAMN02981294
KEYWORDS    RefSeq.
SOURCE      Ogataea parapolymorpha DL-1
  ORGANISM  Ogataea parapolymorpha DL-1
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Saccharomycetes; Saccharomycetales; Pichiaceae; Ogataea.
REFERENCE   1  (bases 1 to 747)
  AUTHORS   Ravin,N.V., Mardanov,A.V., Eldarov,M.A., Kadnikov,V.V.,
            Beletsky,A.V., Zvereva,M.I., Smekalova,E.M., Dontsova,O.A. and
            Skryabin,K.G.
  TITLE     Genome sequence of the methylotrophic yeast Hansenula polymorpha
            DL1
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 747)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (28-DEC-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 747)
  AUTHORS   Mardanov,A.V., Kadnikov,V.V. and Beletsky,A.V.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2013) Lab of Molecular Cloning, Centre
            'Bioengineering' RAS, Prosp. 60-let Oktyabrya, bld. 7-1, Moscow
            117312, Russia
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_027861).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Ogataea parapolymorpha DL-1"
                     /mol_type="mRNA"
                     /strain="DL-1"
                     /type_material="holotype of Candida parapolymorpha"
                     /db_xref="taxon:871575"
                     /chromosome="VI"
                     /country="Russia: Moscow"
     gene            <1..>747
                     /locus_tag="HPODL_01466"
                     /db_xref="GeneID:25770927"
     CDS             1..747
                     /locus_tag="HPODL_01466"
                     /EC_number="3.1.30.-"
                     /codon_start=1
                     /product="Mitochondrial nuclease"
                     /protein_id="XP_013933452.1"
                     /db_xref="GeneID:25770927"
                     /db_xref="GO:0003676"
                     /db_xref="GO:0004520"
                     /db_xref="GO:0004529"
                     /db_xref="GO:0004540"
                     /db_xref="GO:0005634"
                     /db_xref="GO:0005743"
                     /db_xref="GO:0006308"
                     /db_xref="GO:0006310"
                     /db_xref="GO:0006401"
                     /db_xref="GO:0006915"
                     /translation="

MEFVSVYDRQKRNPYYVVEHITPESLKRDASGGGDRKNSVFKEDEQIPMKFRGFLRDYFRSGYDRGHQAPAADAKFSQVAMDETFYLTNMSPQVGAGFNRDYWAHFEDFVRRLTTGYGSVRVVTGPLYLPKKDPVDGKYKVTYEVIGNPPNIAVPTHFFKLIVAEKSFKRSPNSDDIAVAAFVMPNAVIPNEVPLTSFEVPVDALERSSGLEFLKMVPDNKKKQLCKEFSCNIIVREFNDTVKALPSE"

     misc_feature    4..660
                     /locus_tag="HPODL_01466"
                     /note="DNA/RNA non-specific endonuclease; Region: NUC;
                     smart00477"
                     /db_xref="CDD:214683"
     misc_feature    order(190..195,199..201,295..297,319..321,331..333)
                     /locus_tag="HPODL_01466"
                     /note="active site"
                     /db_xref="CDD:238043"
     misc_feature    order(190..195,331..333)
                     /locus_tag="HPODL_01466"
                     /note="substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:238043"
     misc_feature    295..297
                     /locus_tag="HPODL_01466"
                     /note="Mg2+ binding site [ion binding]; other site"
                     /db_xref="CDD:238043"
ORIGIN      

atggaattcgtctcggtgtacgaccgtcagaaaagaaatccatattacgtcgtggaacatatcactcccgagtcattgaagcgtgatgcttcggggggaggggaccgtaagaactctgtgttcaaagaagatgagcaaattccaatgaagtttcgcggatttctgcgagattacttcagatcagggtacgacagaggacatcaagctcctgctgcggacgccaaattttcccaagtagccatggacgaaacgttctacctcacaaacatgtctccccaggtaggagccggtttcaacagagactactgggcacactttgaggatttcgtgagaagactaactactggctacggttctgtcagagtcgttactggcccgttgtaccttcctaaaaaagaccctgttgacggaaaatacaaggtcacgtacgaggttattggcaatccaccaaatattgctgttcccacgcactttttcaagctgatcgtggcagaaaagtcgtttaaaagaagtcccaactctgacgatattgcagttgcggccttcgtgatgcccaatgctgtcatccctaatgaggttcctctcacttcttttgaagtgcctgttgatgcactagagcgctcttcgggcctggaattcctgaaaatggtgcctgataacaagaaaaaacaactgtgcaaagaatttagctgtaacattatcgtgcgagagttcaacgataccgtcaaagctctaccatctgaataa

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