LOCUS       XM_013200228            1573 bp    mRNA    linear   VRT 01-AUG-2024
DEFINITION  PREDICTED: Anser cygnoides homeobox B8 (HOXB8), transcript variant
            X1, mRNA.
ACCESSION   XM_013200228
VERSION     XM_013200228.3
DBLINK      BioProject: PRJNA1136952
KEYWORDS    RefSeq.
SOURCE      Anser cygnoides (Swan goose)
  ORGANISM  Anser cygnoides
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes;
            Anatidae; Anserinae; Anser.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_089894) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 1, 2024 this sequence version replaced XM_013200228.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_040182565.1-RS_2024_07
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 07/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Anser cygnoides"
                     /mol_type="mRNA"
                     /isolate="HZ-2024a"
                     /db_xref="taxon:8845"
                     /chromosome="22"
                     /sex="female"
                     /tissue_type="blood"
                     /geo_loc_name="China: Taizhou"
                     /collection_date="2022-10"
                     /breed="goose"
     gene            1..1573
                     /gene="HOXB8"
                     /note="homeobox B8; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 8 Proteins"
                     /db_xref="GeneID:106048331"
     CDS             1..729
                     /gene="HOXB8"
                     /codon_start=1
                     /product="homeobox protein Hox-B8 isoform X1"
                     /protein_id="XP_013055682.1"
                     /db_xref="GeneID:106048331"
                     /translation="

MSSYFVNSLFSKYKTGDSLRPNYYDCGFAQDLGGRPTVVYGPSTGGTFQHPTQIQEFYHGASSLSSSPYQQNPCAVACHGDPSNFYGYDPLQRQSLFSAQESDLVQYTDCKLAASGLGEEAESSEQSPSPTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKMERAQEVDEEGEAQKVDKK"

     misc_feature    436..606
                     /gene="HOXB8"
                     /note="Region: Homeodomain; pfam00046"
                     /db_xref="CDD:459649"
     polyA_site      1573
                     /gene="HOXB8"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

atgagctcttattttgtcaactcactcttctccaaatacaaaaccggggactccttgcgtcccaattactatgactgtgggttcgctcaggatcttgggggcagacccacggtggtgtacggacccagcacggggggcaccttccagcatccgacccaaatccaggagttttaccacggagcatcctcactctccagctccccttaccaacagaatccctgcgccgtggcgtgccatggggaccccagcaacttctatggctacgaccccttgcaaaggcagagcctcttcagcgcccaggagtcggacttggtgcagtacacggactgcaagcttgctgccagcggccttggagaggaggcggagagctcggagcagagcccttctccgacccagcttttcccctggatgcgaccgcaagcagccgctggacggaggagggggaggcaaacctacagccgctaccagacgctggaactggagaaggaatttctatttaatccctacctgacccgcaaacggaggatcgaggtctcgcatgccctgggattgacagaaaggcaggtcaaaatctggttccagaacagaaggatgaaatggaaaaaggaaaacaacaaagacaagtttcccagcagcaaatgcgagcaggaagaactggaaaaacagaaaatggaaagagcccaggaggtggacgaggaaggggaagcacagaaggtggacaagaaataaaagcatttttaaggactgaaaggcaagcgctgctggggtggaagagcccctaagccccacattaatggtagttaatgtaagggaggggtgggaaacaacaatgcatagaaaagagaaagaaaaaaaaaacattttattgctgtaaaacaatatagctgtaagcaccactttcctgattatcctttgaaacaatgaacagtatgcaaaagtggtctggaggtctctcctgccttttgccagttattaactagtggtagtgtaacgcaatagcttatgtaaaacatgactgtgaatttttttttctctctctctgtctttctgtctctctcttctttcctggggggtgggttggttaacatagctttcaatgctatagaagttatgtgaaattacatttgtgcactttttaaaaaatttccactttttttgttgtggtttatctgtatgtactggaggtagcgattgacacaaacatcccaacaacatgaaactgcctatttatgctacagttttctctctctttctctctctttactttctttacttctgttcttatgttcgcttcattttttttgttttgtttttttcgatttttgaatgtctcttaaaaaaaaagagaaaaaaacattaaaaaacgttttcctctcctttagttagcatgcgcacagtgaagcaagttgtaaagtgatctttaggttaactgtgaaaaagaatgtatactgtatacgtgaattactttattgggggaactaatgatatattttgttgttctttcatcactttgttctattgtctaaacctggaagcagcggaagaaagttacaataaagtttacaagcgagaa

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