LOCUS       XM_012794168            2901 bp    mRNA    linear   INV 13-JUN-2017
DEFINITION  Babesia microti strain RI partial mRNA.
ACCESSION   XM_012794168
VERSION     XM_012794168.1
DBLINK      BioProject: PRJEA172341
            BioSample: SAMEA3139016
KEYWORDS    RefSeq.
SOURCE      Babesia microti strain RI
  ORGANISM  Babesia microti strain RI
            Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Piroplasmida;
            Babesiidae; Babesia.
REFERENCE   1  (bases 1 to 2901)
  AUTHORS   Silva,J.C., Cornillot,E., McCracken,C., Usmani-Brown,S.,
            Dwivedi,A., Ifeonu,O.O., Crabtree,J., Gotia,H.T., Virji,A.Z.,
            Reynes,C., Colinge,J., Kumar,V., Lawres,L., Pazzi,J.E., Pablo,J.V.,
            Hung,C., Brancato,J., Kumari,P., Orvis,J., Tretina,K., Chibucos,M.,
            Ott,S., Sadzewicz,L., Sengamalay,N., Shetty,A.C., Su,Q., Tallon,L.,
            Fraser,C.M., Frutos,R., Molina,D.M., Krause,P.J. and Ben Mamoun,C.
  TITLE     Genome-wide diversity and gene expression profiling of Babesia
            microti isolates identify polymorphic genes that mediate
            host-pathogen interactions
  JOURNAL   Sci Rep 6, 35284 (2016)
   PUBMED   27752055
  REMARK    Publication Status: Online-Only
REFERENCE   2
  AUTHORS   Cornillot,E., Dassouli,A., Garg,A., Pachikara,N., Randazzo,S.,
            Depoix,D., Carcy,B., Delbecq,S., Frutos,R., Silva,J.C., Sutton,R.,
            Krause,P.J. and Mamoun,C.B.
  TITLE     Whole genome mapping and re-organization of the nuclear and
            mitochondrial genomes of Babesia microti isolates
  JOURNAL   PLoS ONE 8 (9), E72657 (2013)
   PUBMED   24023759
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2901)
  AUTHORS   Cornillot,E., Hadj-Kaddour,K., Dassouli,A., Noel,B., Ranwez,V.,
            Vacherie,B., Augagneur,Y., Bres,V., Duclos,A., Randazzo,S.,
            Carcy,B., Debierre-Grockiego,F., Delbecq,S., Moubri-Menage,K.,
            Shams-Eldin,H., Usmani-Brown,S., Bringaud,F., Wincker,P.,
            Vivares,C.P., Schwarz,R.T., Schetters,T.P., Krause,P.J.,
            Gorenflot,A., Berry,V., Barbe,V. and Ben Mamoun,C.
  TITLE     Sequencing of the smallest Apicomplexan genome from the human
            pathogen Babesia microti
  JOURNAL   Nucleic Acids Res. 40 (18), 9102-9114 (2012)
   PUBMED   22833609
REFERENCE   4  (bases 1 to 2901)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JUN-2017) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (bases 1 to 2901)
  AUTHORS   Genoscope -,C.E.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2012) Genoscope - Centre National de Sequencage :
            BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr
            - Web : www.genoscope.cns.fr)
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_034969).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..2901
                     /organism="Babesia microti strain RI"
                     /mol_type="mRNA"
                     /strain="RI"
                     /db_xref="taxon:1133968"
                     /chromosome="IV"
     gene            <1..>2901
                     /locus_tag="BmR1_04g05080"
                     /old_locus_tag="BBM_III05080"
                     /db_xref="GeneID:24425660"
     CDS             1..2901
                     /locus_tag="BmR1_04g05080"
                     /old_locus_tag="BBM_III05080"
                     /note="overlaps_old_locusTagID:BBM_III05080"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="XP_012649622.1"
                     /db_xref="GeneID:24425660"
                     /db_xref="UniProtKB/TrEMBL:I7I9K8"
                     /translation="

MEDQNTTNESISNLHMENYFPKDIFSNLDNQKNLKTYHSKTFEKYFESAAKDNVERCRTSAVKEWLNRNLPSEYNERHKPTLKLNLSPNHLNSTYNKQISDYTRNAYNRIEQLKKLQEAYSLLRQKLQEKRRASCHKEVSEAEASVLNTQRLIISLKREDKDKIATELLIQNAEELGIPSKDLETLNGYTFNEALKTIIDIISNMINNKFMTNLKDRCESARRKAGSEYRDEMERIKVDLDMYKTKSEKLESTISTLNSYADSSKQNAEKVMELQHSLEDSNRQINQLKDSLYNMAKVNEELEKNEVKLEESLVELERYKLESQKLESVIKDLELLNQQKHDNEELIKMLHDELDQCKSKSLQLNKKIEDLENSNKENLIPLNNELAQAYQKLSELEHSYEQIEHQKNEADKKLESSIDEIEKQKQHSEELEQSITKLKQTIEEMEKETTDQVNDLQTCLIDANCKIESLEGTISQLKQLNLELEGGEHRIQELQSKLTESNSTIEKLEKTITELENVSSKYIDYDEKMDNLQKQLKEYTEKITVLENNASEFNYKDQAETLKTELDKSQLKIMELETMIKENSEKTERVPSPRKDNEEVDRLTSEILQLKNQVDILQNEKTDLEQKLSQQSPRKDNEEVDRLTSEILQLKNQVDILQNEKTDLEQKLSQQSPRKDNEEVDRLTSEILQLKNQVDILQNEKTDLEQKLSQQSPRKDNEEVDRLTSEILQLKNQVDILQNEKTDLEQKLSQQSPRKDNEEVDRLTSEILQLKNQVDILQNEKTDLEQKLSQISAVIEENRQYKEKIELLERKLNEINKEKPKDSFTNVEVINAAFEDVRSLPINSSNASDWTAMPSELELEEHKLYKKKSSRKGKKKSSREKETSRSDISSRSTSRHSKKDKPTIVDNNSTDVEASDSNEQMISDPVESITDQLNLVKQSTIQLTELGYDSISNVGSYLSDYIFGGN"

     misc_feature    682..2445
                     /locus_tag="BmR1_04g05080"
                     /old_locus_tag="BBM_III05080"
                     /note="DNA double-strand break repair ATPase Rad50;
                     Region: PRK03918"
                     /db_xref="CDD:235175"
ORIGIN      

atggaggaccaaaatactacaaatgaaagcatttcaaatttgcacatggaaaactacttccccaaagatattttttccaacctagataatcaaaaaaacttaaaaacatatcattcaaagacgtttgagaaatatttcgagtctgctgccaaagataatgttgaaaggtgtcgtacatctgctgtcaaagaatggctgaatagaaatcttcctagtgaatataatgaaaggcacaagcccacacttaaactaaacctgagccccaaccacttaaactcaacttacaacaaacaaatttccgattacacaaggaatgcctataatcgcatagaacagttgaagaagcttcaagaagcttactctctgttaagacagaaactacaagagaaacgcagggcctcttgtcataaggaggtctctgaggcagaggcttcagttcttaatactcaaagattgataattagcttaaagagagaagacaaagataaaatcgccacagagttacttatacaaaatgcagaagagttaggtataccatccaaagatttggaaactctaaacggctacacatttaatgaggctctcaaaactataatcgatataatttctaacatgataaacaacaaatttatgacaaatttgaaagataggtgtgaatcagctaggcgtaaggcaggatctgaatatcgcgatgaaatggaaaggataaaagtcgatttggacatgtacaaaacaaagtctgaaaaactcgaatccacaatatctacattgaattcttatgcagattctagcaaacaaaatgctgaaaaggtcatggaattgcagcattcgctagaagattccaatagacaaattaatcagctaaaagattcactgtacaatatggccaaagttaatgaggagttggaaaaaaacgaagttaagctagaggaaagtttggtagagttggagaggtataagttggaatctcaaaagcttgagtcagtcattaaagatttagagcttttgaaccaacaaaaacatgataatgaagaactcattaaaatgctgcatgatgagctagatcagtgtaagtctaagtcactgcaattgaataaaaagattgaagatcttgaaaattcaaacaaggaaaacctaatacccttgaacaatgaattggcccaggcttatcagaaactatccgaattggagcattcatatgaacagattgaacaccagaagaatgaagcagataaaaaacttgaatcttcaattgatgagattgagaaacagaaacaacactccgaagaattggagcaatccatcactaaattgaaacaaacaattgaagaaatggaaaaggaaaccacggaccaagtaaatgatctgcaaacgtgcctaatagatgcgaattgtaaaatcgaatcgctagagggaacgatttctcagttgaaacagctaaacttagagttggaagggggagaacataggatacaggaattacaatccaagcttaccgaatcaaattccacaattgaaaaacttgaaaagacgatcacagaattggaaaatgtgtctagtaaatatatcgactacgatgagaagatggataatttgcaaaagcagctgaaagaatacactgaaaagatcacagtgctggaaaacaacgcctctgaattcaactataaagaccaagctgaaacgttgaagacggaactggataagtcgcaactaaagataatggaactggagactatgattaaggagaacagcgaaaaaacggaaagagtgccatctcccagaaaggacaacgaggaggttgatagattaacttcggaaatattacagttgaagaatcaggtggacattctgcaaaatgaaaagactgaccttgaacaaaaattatcacaacaatctcccagaaaggacaacgaggaggttgatagattaacttcggaaatattacagttgaagaatcaggtggacattctgcaaaatgaaaagactgaccttgaacaaaaattatcacaacaatctcccagaaaggacaacgaggaagttgatagattaacttcggaaatattacagttgaagaatcaggtggacattctgcaaaatgaaaagactgaccttgaacaaaaattatcacaacaatctcccagaaaggacaacgaggaagttgatagattaacttcggaaatattacagttgaagaatcaggtggacattctgcaaaatgaaaagactgaccttgaacaaaaattatcacaacaatctcccagaaaggacaacgaggaggttgatagattaacttcggaaatattacagttgaagaatcaggtggacattctgcaaaatgaaaagactgaccttgaacaaaaattatcacaaattagtgcggttattgaagaaaatagacaatacaaggaaaaaatcgaattactcgagagaaaattgaatgaaataaataaagagaaaccaaaagactcatttacaaacgtagaagttatcaatgcagcttttgaagatgtaagatccctcccaatcaattcctccaatgcctctgattggaccgcaatgcccagtgagctggagctggaagagcataaattgtacaaaaaaaaatctagtagaaaggggaaaaagaaatcatcaagggagaaggagactagcagaagtgacatatcatccaggtcaactagcaggcactcaaagaaggataagcctacaatcgttgacaacaactctactgatgtagaagcatcagattcaaatgaacagatgattagtgatccagttgaatcgattacagaccagttgaacttggttaaacaatcaacaatacaactaactgagctggggtacgacagcatatccaacgttgggtcgtacttgtctgactacatatttggcggtaattaa

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