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2024-03-29 18:52:27, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_012552314            2058 bp    mRNA    linear   MAM 31-DEC-2019
DEFINITION  PREDICTED: Sarcophilus harrisii fibroblast growth factor binding
            protein 1 (FGFBP1), mRNA.
ACCESSION   XM_012552314
VERSION     XM_012552314.2
DBLINK      BioProject: PRJNA596784
KEYWORDS    RefSeq.
SOURCE      Sarcophilus harrisii (Tasmanian devil)
  ORGANISM  Sarcophilus harrisii
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_045431.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 31, 2019 this sequence version replaced XM_012552314.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Sarcophilus harrisii Annotation
                                           Release 103
            Annotation Version          :: 103
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.3
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2058
                     /organism="Sarcophilus harrisii"
                     /mol_type="mRNA"
                     /db_xref="taxon:9305"
                     /chromosome="6"
                     /cell_line="91H"
     gene            1..2058
                     /gene="FGFBP1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 5 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 11 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:100915364"
     CDS             102..803
                     /gene="FGFBP1"
                     /codon_start=1
                     /product="fibroblast growth factor-binding protein 1"
                     /protein_id="XP_012407768.1"
                     /db_xref="GeneID:100915364"
                     /translation="
MKMKCIALFSVLLLVSQLLLVDCEKQRKRKHGRDEKGEGKHPPGSPDKEEKGQKAKGGKRLPRGKFSTQENVPCTWAVTEKEGVALKVQCKGQEAQFECTFAGSPSSCPHYAGNEKAYWKQIGRALQKQRNLCADPKSILKSRVCKQGPKEAHLRMVDSSKKSQSQDKKGRKDPQTAAPTVGPAAATVQPTTAAQCEEDMEAINQRKVASEYCGDTWGSLCTFLLTMLQDKKC"
     misc_feature    165..791
                     /gene="FGFBP1"
                     /note="FGF binding protein 1 (FGF-BP1); Region: FGF-BP1;
                     pfam06473"
                     /db_xref="CDD:428962"
ORIGIN      
gccccggctgtataagtaacacgctggctcacgctgggttaccgagcagcctgcagtgcacccagtcggagcccggaaaggtttcctacccgagtggaagcatgaagatgaagtgcattgccctattctctgtcctgctcctggtctcacagctgctcttggtggactgtgaaaaacagaggaaaagaaaacacgggagagatgaaaagggcgaagggaaacatccccccggctctcctgacaaggaggagaaaggccaaaaggctaagggaggaaaaaggctccccaggggcaagttttccactcaagagaatgtcccttgtacttgggcagtgactgagaaggagggcgtcgccttgaaagttcaatgcaaagggcaggaggcccaatttgagtgtacctttgcaggcagcccttcctcctgcccccattacgcaggcaatgaaaaagcctactggaaacaaataggccgagccctgcagaaacagaggaacctttgcgcagaccccaagagcatcctcaagtcccgcgtgtgcaaacaagggcctaaagaagctcatctcagaatggtggactccagcaagaagagccagagtcaggataagaagggcagaaaggaccctcagacagcagcccccaccgtcggaccggctgccgccaccgtccagcccacgactgctgcccagtgtgaggaggacatggaggcgatcaaccagagaaaggtggccagcgaatactgtggggacacctggggctccctgtgcaccttcctgctcaccatgctgcaggacaaaaagtgctagcggactcccagctggagcctgtgctccccatgtgctgcagaaaagcctttcacgcttccctcccgcacggacttctctggcgtcacaagggaggggagcccagctacgtatttaagtctgttttgtattgttttgcttgttttgtattttggaatttatactttattggattttgttttcagtggccaacaatgttacaaaaactgtaaaagggcatgtgtgtgtacacataaatatagatgtaggtacatacacatgtatataaaagtgcaaatgttatacacaagtacgtggtctgtatagatacatacaaggtggtgtgtgtgtgtgtgtgtgtgtacacataaatatacatgcaggtagatgtaggtgcacatacatgtgtgtatatatatatatatatatatatatatgcaaatgtgcacaggtacatggtttgtatagatgcataccaggttgttgtgtacatgtaaatatacacatataaatgtagatgtgtatatatacatatatatgcaaattgcaaagcacatggtctgtatagatacatacaaggtgtgtgtgtacatgtaaatatacatgaaggtagatctaggtctatatacacatgtgtatgtacatgcaaatgtgcacaggtacatgatctgtgtaaatacataaactgtgtgtcttatgtacacataaatatacatgtgggtaaatgtagggacataaacgtgtatatacatgcaaatgtgcacaggtgcaaggtctgtctagatacaaggtggttgtatgtgtgtacacataaatatacatgcaggtagatgtaggtgtatatatacatatgtgtgtacatgcaaatgtgcacaggtacatggtcggtatagatacatacaaggttgtttttgtggatttgtggattcataaatatacatacaggtagttgtaggtacatatacacatgtgtatatacatgcaaaatgcatataggtccatggtctgtgtagataaacacaaggtggttgtatgtgtgtgcacataaacatacacgcaggtagatgtagggacatatacatgtgtatgtacacgtacatgggcacaggttcatggtcttatgtggtctgtgtagataacacacgctctcttcagttcctctttgggctcagctggccagagggggtttcagcgcagtgcactccctaacaccctgagaatgtttctgacctggccagcatctactttggccaagataataaagttttgcaaacatgtt
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]