2024-04-29 13:34:03, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_010078668 547 bp mRNA linear VRT 06-NOV-2014 DEFINITION PREDICTED: Pterocles gutturalis transmembrane protein 139-like (LOC104465571), partial mRNA. ACCESSION XM_010078668 VERSION XM_010078668.1 DBLINK BioProject: PRJNA265368 KEYWORDS RefSeq; corrected model; includes ab initio. SOURCE Pterocles gutturalis (yellow-throated sandgrouse) ORGANISM Pterocles gutturalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Ciconiiformes; Pteroclidae; Pterocles. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_010125685.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pterocles gutturalis Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 14% of CDS bases internal stop codons :: corrected 1 genomic stop codon ##RefSeq-Attributes-END## COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..547 /organism="Pterocles gutturalis" /mol_type="mRNA" /isolate="BGI_N339" /db_xref="taxon:240206" /chromosome="Unknown" /sex="male" /country="Tanzania" gene <1..547 /gene="LOC104465571" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:104465571" CDS <1..547 /gene="LOC104465571" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon" /codon_start=2 /transl_except=(pos:407..409,aa:OTHER) /product="LOW QUALITY PROTEIN: transmembrane protein 139-like" /protein_id="XP_010076970.1" /db_xref="GeneID:104465571" /translation="
VNAAYEAPTYEEVMTMSVPAIWTIASNPGLVPSPMNEPPPYNVVIESSAQEEIVVEALRVSVASDTRHTSETDTGSRMQLQLVLPPRLQRFVSDIHEVKGVEDRFEPPEPLTPPPAYESAINDEVFEDTFQPSTLXLISTSMNAEPNPHSNTGCSSREGERSEIFHAQNCKSLSHHSLNQR"
ORIGIN
ggtgaacgctgcctacgaagcacctacctatgaggaagtgatgaccatgtcagttccagcaatttggacaattgcatccaatccaggcttagtgccttcaccaatgaatgagcctcctccttacaacgtagttattgaatcatctgcccaagaagagattgtggtggaggctctcagggtgtcagtggcgtcagacacaaggcacacctctgagacagacacaggctccaggatgcagttgcagctggtgcttccccctagactgcagcggtttgtttcagacatccatgaagtgaaaggtgttgaagacaggtttgagccaccggagccactcactccaccacctgcttatgaaagtgccatcaacgatgaggtctttgaagatactttccagccctccacattatgattaatttcaacttccatgaatgcagaaccaaaccctcactccaatacaggatgctcctcaagggaaggtgaaagatctgagatttttcatgcccaaaactgtaaaagtttgtctcaccattctttgaaccagagatga
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DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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