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2024-04-19 19:56:10, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_009823733            1389 bp    mRNA    linear   PLN 21-OCT-2014
DEFINITION  Aphanomyces astaci hypothetical protein mRNA.
ACCESSION   XM_009823733
VERSION     XM_009823733.1
DBLINK      BioProject: PRJNA264335
            BioSample: SAMN01906578
KEYWORDS    RefSeq.
SOURCE      Aphanomyces astaci
  ORGANISM  Aphanomyces astaci
            Eukaryota; Sar; Stramenopiles; Oomycota; Saprolegniales;
            Saprolegniaceae; Aphanomyces.
REFERENCE   1  (bases 1 to 1389)
  AUTHORS   Russ,C., Tyler,B., van West,P., Dieguez-Uribeondo,J., Young,S.K.,
            Zeng,Q., Gargeya,S., Fitzgerald,M., Abouelleil,A., Alvarado,L.,
            Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Griggs,A., Gujja,S.,
            Hansen,M., Howarth,C., Imamovic,A., Ireland,A., Larimer,J.,
            McCowan,C., Murphy,C., Pearson,M., Poon,T.W., Priest,M.,
            Roberts,A., Saif,S., Shea,T., Sykes,S., Wortman,J., Nusbaum,C. and
            Birren,B.
  CONSRTM   The Broad Institute Genomics Platform
  TITLE     The Genome Sequence of Aphanomyces astaci APO3
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1389)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (21-OCT-2014) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1389)
  AUTHORS   Russ,C., Tyler,B., van West,P., Dieguez-Uribeondo,J., Young,S.K.,
            Zeng,Q., Gargeya,S., Fitzgerald,M., Abouelleil,A., Alvarado,L.,
            Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Griggs,A., Gujja,S.,
            Hansen,M., Howarth,C., Imamovic,A., Ireland,A., Larimer,J.,
            McCowan,C., Murphy,C., Pearson,M., Poon,T.W., Priest,M.,
            Roberts,A., Saif,S., Shea,T., Sykes,S., Wortman,J., Nusbaum,C. and
            Birren,B.
  CONSRTM   The Broad Institute Genomics Platform
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2013) Broad Institute of MIT and Harvard, 7
            Cambridge Center, Cambridge, MA 02142, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_009798264).
FEATURES             Location/Qualifiers
     source          1..1389
                     /organism="Aphanomyces astaci"
                     /mol_type="mRNA"
                     /strain="APO3"
                     /db_xref="taxon:112090"
                     /chromosome="Unknown"
                     /collection_date="2012"
     gene            1..1389
                     /locus_tag="H257_00839"
                     /db_xref="GeneID:20802835"
     CDS             81..1319
                     /locus_tag="H257_00839"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="XP_009822035.1"
                     /db_xref="GeneID:20802835"
                     /translation="
MKTSCFSIFLFCAAHQSSARYLRNQGGNDVIPGQNPLQLVPADGSTLVQSKVDNVDADGPWNNDLVLNQFQLADSDPPLANVDDLKEQLTELPDPILLIQVEELFQSPSSDAESFSARDEVDVGALLDDIHDVTDDLLDASDIVSDADEVLVQSPPNEVVALAAEDEVDVGALLDDIHDVSDDLLDASDIVSDADEVLVQSPPNEVVALAAEDEVDVGALLDDIHDVSDDLLDASDISPPNEVVALAAEDEVDVGALLDDIHDVSDDLLDASDIVSDADEVLVQSPPNEVVALAAEDEVDVGALLDDIHDVSDDLLDASDIVSDADEVLVQSPPNEVVALAAEDEANVSSYNIETVEEAAEPSRYDSSIELVDVLVDDQDTAVVDVLEDGSEGADLLSGDAEVDADGDDVAN"
ORIGIN      
caaacactccatttagaagaacatgtgcataacatcatgccgacaatactagcttcagccatttccaaatcatcttcgccatgaagacatcatgcttttccatctttctcttctgtgcggcgcaccaaagttctgcgcggtaccttcgaaatcaggggggaaacgatgtgatccctggccagaatccgttgcaacttgtgcctgcagacggatccactttggttcagagcaaagtcgacaacgttgacgctgatggtccgtggaacaacgacctcgtcctcaaccaattccaacttgccgatagcgacccgcctctcgccaacgtagatgaccttaaagagcaactcaccgagcttcctgatccaatcctcttgattcaagtggaagaattattccagagtccttccagcgatgctgagtccttctctgctcgagatgaagtcgacgtgggtgccctccttgacgacatccacgatgttacggatgacttgctggatgccagcgacatcgtctcagatgccgacgaagtgctcgttcagagtccgcccaacgaggtggtggccttggctgccgaagatgaagtcgacgtgggtgccctccttgacgacatccacgatgtttcggatgacttgctggatgccagcgacatcgtctcagatgccgacgaagtgctcgttcagagtccgcccaacgaggtggtggccttggctgccgaagatgaagtcgacgtgggtgccctccttgacgacatccacgatgtttcggatgacttgctggatgccagcgacatcagtccgcccaacgaggtggtggccttggctgccgaagatgaagtcgacgtgggtgccctccttgacgacatccacgatgtttcggatgacttgctggatgccagcgacatcgtctcagatgccgacgaagtgctcgttcagagtccgcccaacgaggtggtggccttggctgccgaagatgaagtcgacgtgggtgccctccttgacgacatccacgatgtttcggatgacttgctggatgccagcgacatcgtctcagatgccgacgaagtgctcgttcagagtccgcccaacgaggtggtggccttggctgctgaagatgaagccaacgtgagcagttataatattgaaacggttgaagaggcagctgagccctcacgctatgacagtagcattgaactcgtggatgtgttggttgacgatcaagatacggccgtggttgacgttttggaggacgggtcggagggggcagatctgctatcaggggacgctgaagtcgatgcagacggtgatgacgtggccaactaagtagtcgacgcaggcagtgatatatagtataagccccaatcgggtatttacagggagtttcattttttaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]