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2024-05-20 07:08:27, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_009484458            2065 bp    mRNA    linear   VRT 06-OCT-2014
DEFINITION  PREDICTED: Pelecanus crispus ST6
            (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,
            3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
            (ST6GALNAC5), mRNA.
ACCESSION   XM_009484458
VERSION     XM_009484458.1
DBLINK      BioProject: PRJNA253833
KEYWORDS    RefSeq.
SOURCE      Pelecanus crispus (Dalmatian pelican)
  ORGANISM  Pelecanus crispus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Pelecaniformes; Pelecanidae;
            Pelecanus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_009090309.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Pelecanus crispus Annotation Release
                                           100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 6.1
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Pelecanus crispus"
                     /mol_type="mRNA"
                     /isolate="BGI_N334"
                     /db_xref="taxon:36300"
                     /chromosome="Unknown"
                     /sex="male"
     gene            1..2065
                     /gene="ST6GALNAC5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 mRNAs, 2 ESTs, 6 Proteins"
                     /db_xref="GeneID:104032198"
     CDS             4..744
                     /gene="ST6GALNAC5"
                     /codon_start=1
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 5"
                     /protein_id="XP_009482733.1"
                     /db_xref="GeneID:104032198"
                     /translation="
MHCKSCALVTSSGHLLGSKQGDRIDETECVIRMNDAPTRGYGKDVGNKTSLRVIAHSSIQRILRNRNELLNMSHGAVFIFWGPSSYMRRDGKGLVYNNLQLMNQILPQLKAYMISRHKMLQFDDLFKRETGKDRKISNTWLSTGWFTMTIALELCDRINVYGMVPPDFCRDPNHLSVPYHYYEPLGPDECTMYISHERGRKGSHHRFITEKRVFENWARTFNIHFFQPDWKPEPLTVRHPEIKPVV"
     misc_feature    7..552
                     /gene="ST6GALNAC5"
                     /note="Glycosyltransferase family 29 (sialyltransferase);
                     Region: Glyco_transf_29; pfam00777"
                     /db_xref="CDD:425864"
ORIGIN      
aaaatgcactgcaagagttgtgcattggtgaccagctctggacaccttctgggaagtaaacaaggtgacagaatcgacgagacagagtgcgtaatacgaatgaatgatgcgcctactcgaggttatggaaaagatgttggaaacaaaacgagccttcgagtcattgcacactccagtattcagaggattttgcgaaatcgcaacgaactcttaaatatgagccacggtgctgtgtttatcttctggggtcctagcagctacatgaggagagatggtaaaggcttggtgtataataacctgcagctgatgaatcagatactgcctcaattaaaagcgtatatgatttctcgccacaagatgctccaatttgatgacctttttaaacgggaaactgggaaagacaggaagatatccaacacttggcttagcacgggctggttcacaatgactatcgcattagagctctgtgacaggataaatgtttatggcatggtgccaccggatttctgcagggatcctaatcatctttcagtaccttatcattattacgaacctttgggacctgatgaatgcacaatgtacatttcacacgagcggggacgaaagggcagccatcatcgtttcatcacagagaaacgagtgtttgagaactgggcacggacattcaatattcactttttccaaccagactggaaaccagaaccgctcactgtacgtcaccctgagattaaaccagtggtctgagggacatgcacaagaccgcaatcacagtcacccgctgtgtcagccttcggggtgttggaccttgtaggacagcaaggcgacctagaggagaagggtaacgggatttgcagctgataactgcaacaacagtcaggaagttatgatgaaggagcagagcatatcaagagtactttctgtcgaactatgtattaatcccgtatatagcctttttttggccatctgacttcctgtatgtgtacgtgatttgtgaaaacaactcgagtatcgttaatgggatggttacttcattatggttttttaaagtacaatgccactgaattttcatagtgaaaacttacagtatttatttaatggaggtttttatgcaacctaggccagtatttttctaattcacagttctgtggttgtttatctttcataatctttcaaatccaaaatgaatattgctgatgggttgaaaggcctagctttttatttataaaatttgttgaaaaatatgattctatatagcatgtaattaatatttgatctggaaatgttgcatttcttttaaaaattttgggctccgttccagcctaaagcctttaacagcaagaatggtcccatgtgcagatctagctaactttatattctgacatctcatgttaatatgaaaatggtagtgaaaattctgtttgatattaatgtgcatttgctgctgtgctatcaagctgctgttttttaagtaggggtgggaggaaggagggcaaagtttatccaaaaacccccaatcactgtctatagcagcatgctttcaatgaagaagagaccagctaaggctggagggcttgtgttctgttctgcctcttgtagtcctgcaagaggcggaaggagcaatccccctgaggcaacagactacaaaccagggaacaacggcttgaaacatgaccaaatgtctgaaatcaagaagctgcactatcaggtactacaataccagccacagtagccaaaaagccaacactgcacctgcaaaaatctctgccttccactgttccaagatcaccgctgatctcggagatcctggatcgcgctgaaggtgggacatgaaaagagttccacaagtacaaaactgaccccttgaaaagagcaaagttacacttggtgggttttttgtgacgtacacgtgcatggcgagtccctgcaaaccaaggggacggatgatgctagtgctgtatatggaacctcacagtgtgaattactgggttacgcttggcttgtgaataaagaagatttcagttacagtattatttttccttttgcctcacagatactaaatctctaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]