LOCUS       XM_009328224            6664 bp    mRNA    linear   VRT 26-SEP-2014
DEFINITION  PREDICTED: Pygoscelis adeliae argonaute RISC catalytic component 1
            (AGO1), mRNA.
ACCESSION   XM_009328224
VERSION     XM_009328224.1
DBLINK      BioProject: PRJNA261076
KEYWORDS    RefSeq.
SOURCE      Pygoscelis adeliae (Adelie penguin)
  ORGANISM  Pygoscelis adeliae
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes;
            Sphenisciformes; Spheniscidae; Pygoscelis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_008825115.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Pygoscelis adeliae Annotation
                                           Release 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 6.1
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6664
                     /organism="Pygoscelis adeliae"
                     /mol_type="mRNA"
                     /isolate="BGI_AS28"
                     /db_xref="taxon:9238"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="Antarctica"
     gene            1..6664
                     /gene="AGO1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 5 ESTs, 37 Proteins, and 98%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:103920478"
     CDS             194..2545
                     /gene="AGO1"
                     /codon_start=1
                     /product="protein argonaute-1"
                     /protein_id="XP_009326499.1"
                     /db_xref="GeneID:103920478"
                     /translation="

MVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGEGKDRIFKVSIKWMAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQTVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLPAPILQYGGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMDAHPSRRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPTRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKNERIGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHISGQSNGRDPQALAKAVQVHQDTLRTMYFA"

     misc_feature    236..460
                     /gene="AGO1"
                     /note="N-terminal domain of argonaute; Region: ArgoN;
                     pfam16486"
                     /db_xref="CDD:465134"
     misc_feature    488..640
                     /gene="AGO1"
                     /note="Argonaute linker 1 domain; Region: ArgoL1;
                     pfam08699"
                     /db_xref="CDD:462567"
     misc_feature    641..1003
                     /gene="AGO1"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(797..799,842..844,884..886,896..898,950..952,
                     971..973,977..979)
                     /gene="AGO1"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     misc_feature    1136..2416
                     /gene="AGO1"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(1547..1549,1559..1561,1595..1606,1613..1615,
                     1637..1639,1646..1648,1658..1660,1670..1672)
                     /gene="AGO1"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(1751..1753,1757..1759,1970..1972,2384..2386)
                     /gene="AGO1"
                     /note="active site"
                     /db_xref="CDD:240015"
ORIGIN      

tgcatacctgccgccattgcagcaggtatttcaagcgccgcgtcggcctgggataggaaccgttgggaagcccatcaagctcttggccaactactttgaagtggacattcccaagattgatgtgtatcattatgaagtggatatcaagcccgacaaatgtccacgcagagtcaacagggaagtcgtggagtacatggtacagcacttcaaaccacagatcttcggtgaccgaaagccagtctacgatgggaagaagaacatctacactgtcacggccttgcccattggaaacgagcgggttgactttgaggtgacgatcccaggggaaggcaaggacaggatatttaaggtctccatcaaatggatggccatcgtgagctggcgcatgctgcacgaggccctggtcagcgggcagatccccgtccccctggagtctgtccaggcgctggacgtcgccatgaggcacctggcttccatgaggtacactcccgtcggccgctccttcttctccccccccgaaggctactaccaccccctgggaggcggcagggaggtctggttcggtttccaccagtcagtcaggcctgccatgtggaagatgatgctcaacatcgatgtgtcggccactgccttctacaaagcccagcccgtaatcgagttcatgtgcgaggtgctggacatccggaacatcgacgagcagccgaagcccctgacagactcacagagagtgcgtttcaccaaggagatcaaaggtctgaaagtcgaggttacccactgcgggcagatgaagaggaaataccgcgtgtgtaacgttaccagacggccggccagccaccagacgtttcccctgcagctggagagcggtcagacagtggagtgcacagtggctcagtactttaagcagaaatacaacctgcagctgaaatacccccacctaccctgtctccaggttggccaggagcagaagcacacgtacctgcccttggaggtttgcaacatcgtggcaggccagcggtgcatcaagaagctcacagacaatcaaacgtcaaccatgataaaagcaacagccaggtctgccccagacaggcaggaggaaatcagtcgcctgatgaagaatgccagctacaacctggatccatacattcaggagtttgggatcaaggtgaaagatgacatgacggaggtgacggggagggtcctgccggcgcccatcctgcagtacggaggcaggaaccgggccattgcaactcccaaccaaggcgtgtgggacatgcgagggaagcagttctacaacggcattgagatcaaagtctgggcgattgcttgctttgccccgcagaagcagtgtcgagaggaggtgctgaagaactttacagaccagctgcgcaagatctccaaagatgcagggatgccgatccaaggccagccctgtttctgtaaatacgcccagggtgcagacagtgtggagcccatgtttcgacacctcaagaacacctattcggggcttcagctcatcattgtcatcctgccagggaaaacaccggtgtatgccgaggtgaagcgcgttggggacaccctcctgggaatggccacgcagtgcgtccaggtcaagaacgtggtgaaaacctccccgcagaccctttccaacctctgcctcaagatcaacgtcaagcttggcgggatcaacaacatccttgtgcctcaccagcgctctgcggtctttcagcagccggtgatcttcctcggggccgatgtcactcacccgccggcaggagatgggaagaaaccctccataacagctgttgtgggcagcatggacgcccaccccagccgccggtactgtgccacggtgcgcgtgcagcgtcctcgccaggaaatcatcgaggacttgtcctacatggtgagggagctcctcatccagttctacaaatccacccgcttcaaacccaccaggatcatcttctaccgcgacggcgttcccgaggggcagctcccgcagatccttcactatgagctcctagcgatccgagacgcctgcatcaaactggaaaaggattaccagcctggcatcacctacatcgtcgtccagaaaaggcatcacactcgtctcttctgcgcagacaagaacgagaggattgggaagagtgggaacatcccagcaggaacaacagtggatacaaatatcacccacccctttgagttcgacttctacctgtgcagtcatgcaggcattcagggtacgagccggccatcccactactacgtactctgggatgacaaccggttcaccgcggatgagctgcagatcctcacgtaccagctgtgccatacctacgtgcgctgcacccgctcggtctccatcccggccccggcgtactacgcccgactggtggcgttcagagctcggtaccatcttgtggacaaggagcacgacagtggcgagggcagccatatatctggacagagcaacggcagagacccccaggccttggcgaaggctgtgcaggttcatcaggacactttacgtaccatgtactttgcttgaaagcctaacttttgttacctcactcaagaaagctttcagatttgtaggagccatacaaaaaaggaagcattgggacaccttggtttttttccaatgagaaatcactgcagggcaggcagcgtcgattcgaggcaggagaccagcaccacgggacagaaagatccaacacctttgtaggattggaagagactgatgattatttttttaatttttctggctttgcaaaattttgatctgaccaaacacatgaaggcattcaaggaagggataaaaatcccaggaggcggaagcagattttcatttttaagatgcaatactatagactcctgactgtgaaatggcggatttggtcctccgttgcccaccaggcgctggtaggtattttttgtgggggttggggggaggggatttttagagccttaaaacagaagactagatttataaaactaatattttagaatatgagatgctttaatgggttaaggggaaaaacaactagtttataggagaattctaacactaacagttccccacccccgaataattccccccatataatgtaaggcaccctagcacttagctcagaactgaaaactgtcttccttgtgttacaagctagttagctgctgccatttgaagcaacagtcacagacttttccatgggtgagtgccttactatgatgctgcaaaatttcaatgtttttaatcttgtaaggaaaatagtaatcttgtcttgatggtggtccatatttccatcggaaggagttaatttctatggtcctaagttgcagtttgtgttagatcacgacctcatggtggttaaactccattgaaagatgtgcactttcatataggacatgtttaatggctgctgacccatttttgtttccaatgtactacttgttatttaaaactgtttctgacaaatgggggcatcttcatcccatgaggacagaaatcgctatcgattttttttctctttttttttttcctgaatttttatgatggacaccgggatttttttactaaacattatttttatatgatactgagtctgttgccaaaatacacaagtcattaacattctcagagtttacatcaccgcacttcctgaggctgagttttcaggaaaaaagttttctaacgtttcctgtccgatgagcgttaccaactgcagcccgtgcagtgccgggtactcctcagcgcccgtctcccgtgtgcgttcggcacgtgtctgcccgggtcggctgctttctgaagtaccgcgtaccccaactccagcacctccaaactgtcaccctctctgctgctaggttttgctgctctttgtgtcatggtatcgctgatctcatgcacagggtttttttgttctgaaagcacaccagatttgttccttagtcagaatgatgaaatccttgttattgtcatgggggaaactcctactgatttgtgtttgtaacaggaaaaaagcctttttcccaacagtaacatagtgactgcttttcagactcattttgctgcacggagtgaccgttatgcacagcggggcagtagtagcaactcattaccagtatcatgtgggcagattatctggggtttggtttttttttttttatatatgaaagtgtgcacagcgcttcctgcaagagaaaaaatgacgcgcacactcctaccaaactcttaaagggaagagctctgtcgtcattttactgccaaatgtcagcgcatttccaaggccgatccaccacgagcactgccccttgtcagtttgcgtggatagaagcacacctttttgttttgtactttctgacgtttaaacttgccttgccttcatgaaaaccacattggtcgtgttggcccattgatctgtcctaacaccgggaattcactctacccgttttctttttgggcaacgtgtttgtgaaaaatgaagacatcaatatgctatgcaaactaagtgctgagcccactgatgtcacattttgtgaagatcctacgtttagcacagttctatttttcctcaagacctacagtatttggttcatattctcctttgcaccttgtgtcaacctccactgctgtatatctgcaaggtgtcggggaggagaccaggaactattcatggtcagtagggcagtgaactcttcaggaaggcttttagagagtagggaatgcatcaacactaagtctcaacatgagaagcctacattcctatacacaagtgcctgcatagtgacataaattcagcacctctccatctcatcctcagaactctagcttgtgttcattgaaagctaaatgatctcagaggggctgtacccgctcaccttgcgttagaaagcccctcgttaagaataaaaccggagttaaggtcaaggttctctctgcaaatcagtttgttcaccagcattacaacggaaagcacctggctgctgttctgcagcaaggggcaaaggtattttggtttctagtttttattttagtgttttagttgggtctagaattctgaaatgtcttttagtagctgtggcatatagcacgtgccatttttaaccatttgaaaagagatagtgtgggcatttacggaaacagcttgttgctctgtaacaattttttttaaccttgagacttgaaatgtaaaatggacctttaagatttgcactcatttgtaaggtggctgttcatagaaaactatgaatgaagacttgctgatgtagcacctacttttaacagcaattttaactacacaaaagcttcacagcctctgaaactctcagctgttgacttgcagatcgtgttctgcccttatttcaccctctgcgttgggttttcatggttttgaataaataaaaaagccaaactcagtagctgctgtgccctttaaaccctatttccattttgaagacatttagaaggggtttgagttacccgcatgttttatataatggactatgcactgtaccttctctgcggctccagcattcagcatttctacccttttcttgtctgagatgcaaacgaataactgcatgttgaggtgctgtgcattttgctacccatagcggataggtgttaacccagatacatatcaggatttgtagttagccacaaaccccacacggacatcccgaatggctcccgagtctctgccttctccacgcgcacgcgttccttctgcaactggaagcatcgccaggtgcatgcagttttgtgggaagaggaggaacttccatttacctgtcagttgttgaatgctgtttgtttcccttatctcatatctgaacataacgggggcgagagggcagagcagccctctccccagagcttccaggggcggtcggggtgttctggtattcgcaagcgtacaacctgatgtcctagcgtcaaaaagcccaagcattcaacgttgcctcgcggaaggttttcttcttggaaaatgagtgtgaaataaaagaatgtgattctttcaggaagggaagccagacagcaggacagcaataaaccagtgaaattcatatcttgcctgagtgatttgcacttcaatagttgtgaaagaaaatttacgggactccagtgcttttgtgttcaatttctagcccctttcgtacctcctttatatgagcaagtgttgaactgtacatagggtgtttacaagacactctgtttgggttgttatttttcttgtggttttttttttttgctttagcttgaactctgtatggtccatttgtcaaatagacgtgaacagttgatgtacagtactcactaaacaagcagcagcacaaaacttattttattaagaaaatatggcttatattttaaaggttgaatatcaatttttttttttgtatgcgtggaattgactggtaaagagtaacaaaatccttggattaggccaaaagaaaatactgtaagatcataaccacctctttattaaagaaaacagtatgattaaagagctccagaacattgtatttatatttgattggatttgattgcctttgtggaattttttttttttgccttggtcctgatttttgcttgcaactttgactttgcagtcccaagtgtctgttaccctgtaactgttggcagaagacctaaataaaagcaatgtga

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