LOCUS       XM_008650906            3884 bp    mRNA    linear   PLN 31-AUG-2020
DEFINITION  PREDICTED: Zea mays protein argonaute PNH1 (LOC103629795),
            transcript variant X2, mRNA.
ACCESSION   XM_008650906
VERSION     XM_008650906.4
DBLINK      BioProject: PRJNA655717
KEYWORDS    RefSeq.
SOURCE      Zea mays
  ORGANISM  Zea mays
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD
            clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae;
            Zea.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_050101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 31, 2020 this sequence version replaced XM_008650906.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Zea mays Annotation Release 103
            Annotation Version          :: 103
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.5
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3884
                     /organism="Zea mays"
                     /mol_type="mRNA"
                     /cultivar="B73"
                     /db_xref="taxon:4577"
                     /chromosome="6"
     gene            1..3884
                     /gene="LOC103629795"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 ESTs, 86 long SRA reads, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 13 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:103629795"
     CDS             651..3518
                     /gene="LOC103629795"
                     /codon_start=1
                     /product="protein argonaute PNH1 isoform X2"
                     /protein_id="XP_008649128.1"
                     /db_xref="GeneID:103629795"
                     /translation="

MLEVVLDMTPPPPPPQARLHQGSSAKGGHAERRKQPLQSSVTQPKAEPAAAAAVLPVPEGGKRCRGGGRRRGRAKAPGEPRAALLAPAQAQTQAPPPRTVIGPPVPSKGLSFCRRPGFGTVGARCVVKANHFLAELPDKDLTQYDVKITPEVSSRTVNRAIMAELVRLYRASDLGMRLPAYDGRKNLYTAGTLPFDAREFVVRLADEDDGSGVPPREREYRVAIKFAARADLHHLRQFIAGRQADAPQEALQVLDIVLRELANQRYVSIGRSFYSPDIRKPQRLGDGLQSWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVAQILGKDVISRPLSDANRIKIKKALRGVKVEVTHRGNVRRKYRISGLTTQPTHELIFPIDEQMNMKSVVEYFKEMYGFTIQHPHLPCLQVGNQKKANYLPMEACKIIEGQRYTKRLNEKQITSLLKVTCQRPREQEMDILQTVHQNDYEQDPYAKEFGINISEKLTSVEARVLPAPWLKYHDTGKEKECLPQVGQWNMVNKKVINGCKVSHWACINFSRSVPETTARGFCQELAQMCQISGMEFNSEPVMPIYSARPDQVVKALKNVYNIALNKLKGKDLELLLAILPDNNGQLYGDIKRICETDLGLISQCCLTKHVFKISKQYLANVSLKINVKMGGRNTVLLDAISWRIPLVSDIPTIIFGADVTHPETGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPQRGTVTGGMIRELLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHKDRSSMDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTLMYTDAVMPGAHARFLLSLLHTTHTWQHSGLGSTWNQRCWTTRRPRPPMARAESR"

     misc_feature    930..3347
                     /gene="LOC103629795"
                     /note="protein argonaute; Provisional; Region: PLN03202"
                     /db_xref="CDD:215631"
     misc_feature    993..1424
                     /gene="LOC103629795"
                     /note="N-terminal domain of argonaute; Region: ArgoN;
                     pfam16486"
                     /db_xref="CDD:293095"
     misc_feature    1455..1604
                     /gene="LOC103629795"
                     /note="Argonaute linker 1 domain; Region: ArgoL1;
                     pfam08699"
                     /db_xref="CDD:285861"
     misc_feature    1605..1949
                     /gene="LOC103629795"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(1752..1754,1797..1799,1830..1832,1842..1844,
                     1896..1898,1917..1919,1923..1925)
                     /gene="LOC103629795"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     misc_feature    2082..3350
                     /gene="LOC103629795"
                     /note="Piwi_ago-like: PIWI domain, Argonaute-like
                     subfamily. Argonaute is the central component of the
                     RNA-induced silencing complex (RISC) and related
                     complexes. The PIWI domain is the C-terminal portion of
                     Argonaute and consists of two subdomains, one of...;
                     Region: Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(2511..2513,2523..2525,2559..2570,2577..2579,
                     2601..2603,2610..2612,2622..2624,2634..2636)
                     /gene="LOC103629795"
                     /note="5' RNA guide strand anchoring site; other site"
                     /db_xref="CDD:240015"
ORIGIN      

cgtgccccggctcgttttccacggcttttttacgggccgcgccatcaccatgcatggcttgcctgccgctgccgcccgcgctagtggacctccagcacaatccccggttctccgacgcctgccacctttgttggtaaaaaacagtgaggacgtcgctgccgcttccgtcatgactgttcaccagactatgaccgttcacagactaccctacccctccccctccctcggccggtcccgttcccgcgccgcccgccggccgcccagtccctagcatagcaggccaaacctgcctccgcgcagttgctgccgcgtcaatgctgccgtgccgctggagagagagagagagaggttcttctaatgcccttctgttctgtcccgcccccgcgccgcatttttttttcatttttttttaccttgcgtgacgcttcgttttcacagtgcggcggcggcggctgcttggctcgttgctcctcccattctgctcagctcagcttctgatgagttcgcctttgccgctgctagttaccagcatactagaccactgactgatcacgttataaggcttccgcgcaggcgagcttctgccgccttgtcgggtaaccaaacggacctcgccggccctctccagtggtcacatcacatcacatcacatgctcgaggtcgtcctggacatgacgccgccgccgccgccgccgcaggcgcggctccaccaggggtcatcagccaagggcgggcacgcggagcggaggaagcaaccgctgcagagcagcgtgacacagcccaaggcagagcccgcggcggcggcggccgtgctgccggtgccggagggaggcaagaggtgcagagggggcgggaggcgccgcggcagggccaaggcgcccggtgagcctcgcgccgcgctactagcgccagcgcaggcgcagacgcaggcgcctccgccgcgcacggtcattgggccgcccgtgccgagcaaggggctgtcattctgccgccggccagggttcgggacggtgggcgcgcgctgcgtcgtcaaggccaaccacttcctcgccgagctcccggacaaggacctcacccagtacgatgtgaagatcacgccggaggtgagctcgcggaccgtgaaccgggccataatggcggagctggtccgcctctaccgcgcgtccgacctggggatgcgactcccggcctacgacggccgcaagaacctctacaccgccgggacactaccgttcgacgctcgcgagttcgtcgtgcgcctcgccgatgaggacgacggctccggcgtcccgcctcgggagagggagtacagggtcgccatcaagttcgccgcgcgcgccgacctccaccacctcaggcagttcatcgccgggcggcaggcggacgcgccgcaggaggccctacaggtactcgacatcgtgctccgcgagctcgccaaccagaggtacgtgtccatagggcggtccttctactcgccggacatcaggaagccgcagcggctcggcgacggcctgcagtcgtggcgtgggttctaccagagcatccggccgacccagatgggattgtcgcttaacatcgacatgtcgtccacggcatttattgaacccctgccggtgatcgagttcgtggcccagatattaggaaaggatgtcatatcaaggccattgtccgatgctaaccgaatcaagatcaagaaggcattgcggggtgtaaaagttgaggtcactcaccgggggaatgtacggcgcaagtatcgcatttcaggcctcacaacacagccaactcatgaattgattttcccgattgatgaacaaatgaatatgaaatctgtcgtggaatacttcaaggaaatgtatggtttcaccattcagcatcctcatcttccctgccttcaggttggaaaccaaaagaaggcaaactatctacccatggaggcctgcaagatcattgaaggccagagatacacaaagaggctgaatgaaaaacagatcacatcgctgctaaaggttacatgccaaaggcctagagagcaagagatggatattctacagacagttcatcaaaatgattatgagcaagatccatatgcgaaggaatttgggatcaacattagtgagaagctaacctctgttgaagcccgagtccttcctgcaccttggttgaagtatcatgacactggaaaagagaaagagtgcttaccacaggttggtcagtggaacatggtaaacaagaaagtgataaatggatgcaaggtgagccattgggcatgtataaacttctcaaggagtgttccagaaaccacagctcggggattttgccaggaattggcacaaatgtgtcaaatttcgggcatggaatttaacagtgagcctgtgatgccaatatattcagctagaccagatcaagttgtgaaggcacttaaaaacgtgtataatattgcattgaacaaacttaagggtaaagatcttgaacttcttttggctatcctccctgacaacaatgggcagttatatggtgacatcaaacgtatttgtgaaactgatttggggttgatatcacaatgttgcttaaccaagcatgtttttaagatcagcaagcagtacttggcaaatgtctcactgaaaattaatgttaagatgggaggaagaaacactgtgctcctggacgcaataagttggaggattccgttggtcagtgacatcccaactattatatttggtgcagatgtaacacatcctgaaaccggggaggactcaagtccatcgattgctgccgttgttgcttctcaagattggccagaagttacaaagtatgctggattggtttgtgctcaggcacaccggcaagagctcattcaagacctttacaaaacatggcacgatcctcagagaggcactgtaacaggcggcatgatcagggagctcttaatatccttcaggaaggccactggacagaagccattgagaataatattctacagggacggtgttagtgaaggtcagttctatcaagttctcctttacgagttagatgccatccggaaggcatgtgcatccctagaaccaaattaccagcctcctgtaacatttgtggtggttcaaaaacgtcatcatacaagactatttgcaaataatcacaaagacagaagtagcatggacaagagtggaaatattttgccaggaaccgttgttgattctaagatatgccacccaacggagtttgatttctacctctgtagtcatgctggaatccagggaacgagtaggcctgctcactaccatgtcctctgggatgagaacaatttcacagcagacgaaatgcagacattgacaaacaacctttgctacacattgatgtatactgatgcagttatgcccggtgcacacgctcggtttctgttgtccctcctgcatactacgcacacttggcagcattccgggctcggttctacatggaaccagagatgttggacaaccagacgtccaagacctccaatggcacgagcggagtctcggtgaagcccctgcctgctgtgaaggagaaggtgaaaaggatgatgttctactgctgacaaggagaccacttaaccactcacatgctgtagctaacttgctagagtttagtaaggattagatagctttctcaaggagtgatggatcaatctgatctgttaacgacctctgtaaagtactcggaaatggctgtataatagttgttgtttcaaatgtgaaagcatctaggtccttagttagatttcagtgatcagtgatcaatgacgatactagattattgtgactaatgtatgctagattattatgattaatgtatgttttgcagaaacaatggattttgtgccgccattaatagtattcaattttggtttt

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