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2024-05-02 06:31:44, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_008248328            2547 bp    mRNA    linear   PLN 11-MAY-2016
DEFINITION  PREDICTED: Prunus mume uncharacterized LOC103344706 (LOC103344706),
            transcript variant X2, mRNA.
ACCESSION   XM_008248328
VERSION     XM_008248328.2
DBLINK      BioProject: PRJNA246160
KEYWORDS    RefSeq.
SOURCE      Prunus mume (Japanese apricot)
  ORGANISM  Prunus mume
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae;
            Amygdaleae; Prunus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_024126.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On May 11, 2016 this sequence version replaced XM_008248328.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Prunus mume Annotation Release 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2547
                     /organism="Prunus mume"
                     /mol_type="mRNA"
                     /isolate="4"
                     /db_xref="taxon:102107"
                     /country="China: Tongmai, Bomi County, Tibet"
                     /lat_lon="30.1039 N 95.0856 E"
                     /linkage_group="LG1"
     gene            1..2547
                     /gene="LOC103344706"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 6 mRNAs, 2 ESTs, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 4 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:103344706"
     CDS             387..2294
                     /gene="LOC103344706"
                     /codon_start=1
                     /product="uncharacterized protein LOC103344706 isoform X2"
                     /protein_id="XP_008246550.1"
                     /db_xref="GeneID:103344706"
                     /translation="
MKMSSPAEVSNKPDVSEKKIASPAEASNSGKKTPRSLKGKAKIVKKTPIHNSLKTSKGTTSSQVNGRKRRRNRGNNESGNKREEDAKKMNSKREKQENIVNEKHAEKSHWAQKNPVKIDESEKSRQKQQSTEKRRGSDKSVKSQRNSEKHDEKREKLGGLIFMCSGKTKPDCFHYRIMGVSMGKKDLVLGIKPGLKLFLFDFDLKLLYGVYKASSSGGLKLEPKAFGGAFPAQVRFNVEKDCLPLPESVFKKAIQENYNEKKKFKTELTVRQVRKLTALFQPAQVHSTALATRSPVQAKVRDRGVHEGARESLPHAHRDAHARDLYANGDARSYPVLAHERDQHVKYRDVASVRREETSHDLYLTEKEYRAYGLRGERRNVSPCIVPPALEAHHREYEREHLARQPNLIYREAVPAHRENVHNVSPRIVPPALEARHREYERERLARQPNLIYREAVPAHRETVHSDPLYLNDRDYPAYTRGARHELPPATSASAVDAYASDPYYGYSYYGSSSLDPYLAPQRREEVPSGSFSVVGRRENHLIETDPPRRETDRVERLYSTHAFGGRRENYLIETDPVLRRETDRGERLYSMHAAPADAASGYNRTENYQATKADALPAPVSSRYAFAGPSYSYR"
     misc_feature    <408..>854
                     /gene="LOC103344706"
                     /note="MAEBL; Provisional; Region: PTZ00121"
                     /db_xref="CDD:173412"
     misc_feature    858..1226
                     /gene="LOC103344706"
                     /note="Development and cell death domain; Region:
                     Dev_Cell_Death; pfam10539"
                     /db_xref="CDD:431346"
ORIGIN      
gagggagatatggttattttcttttgatgcccttaaaagaaaaaagtgccgaaagaaattagcgggtataaaaggaggctactccggtaattggcaaattccagacagagagaaggaacaaatcgttcttgattttattatctttctttctgttccagatattctcccctcccctgtttaacgttcgtcggagtctctcagtctctgattctcttgaagcaacgaagattctgtggcttctgtttggtcgctgtgggaaagaagcatccaacaacctggattcatctgaacaaatcccctctccagcacaagcatcaaaaaaaccagactcatctgaactgaagacctcttctgctgaagcgttcagtggacctgagtcagctaaaatgaaaatgtcttctcctgcagaagtgtctaataaacctgatgtatctgaaaagaaaattgcctctcctgcagaagcatccaactctggaaagaaaaccccaagatcattgaagggcaaagctaaaatagtgaagaaaactcccattcataacagcttgaaaacgagcaaaggtacaactagctcacaggttaatgggaggaaacgaaggcggaataggggtaacaacgagagtggcaacaaaagagaagaagatgccaagaagatgaattcaaaaagagagaaacaagagaatatcgtgaatgaaaagcatgccgagaagagccattgggctcaaaagaatccagtaaagattgacgaatccgaaaagagccgacaaaaacagcagagtacagaaaaacgacgtgggtcagacaagagtgtgaagagtcaaaggaacagcgaaaaacatgatgaaaagagggaaaagcttggtggtttgatcttcatgtgcagtggaaagacaaagccagactgcttccattaccgtatcatgggtgtttcaatgggtaaaaaagaccttgtgttgggtatcaaacctgggttgaagctttttctctttgattttgatcttaagcttttgtatggagtttacaaagcatcctcttcaggtggcctaaaactcgagccaaaagcatttggcggagccttccctgctcaggtgcggttcaacgtggagaaagattgtcttcctctacctgagagtgttttcaagaaggcaatacaagaaaactataatgagaaaaagaagttcaaaacagaacttacagttcgacaagtcaggaagctcacagcacttttccaaccagctcaagtccattcaactgctctagccacccgttccccagtccaggctaaagttcgggatcggggagttcatgaaggagcaagggaatcactgccacatgcccacagggatgcacatgctagagatctttatgccaatggtgatgctaggagttatccagtgttagctcatgaaagggaccagcatgttaaataccgagatgtggcatctgtaaggagagaggaaacttcgcatgatttataccttactgaaaaggaatatcgagcttatggtcttcggggagagagaagaaatgtgtctccttgtatcgttcctccagctctggaagctcaccatagagagtatgaaagagagcatcttgcaagacagccaaacctcatttaccgggaggctgtccctgcacatcgagaaaatgttcataacgtgtctcctcgtatcgttcctccagctctggaagctcgccatagagagtatgaaagagagcgtcttgctagacagccaaacctcatttaccgggaggctgtccctgcacatcgagaaactgttcattccgatcctctctacttgaatgatagagattacccagcttatactcgcggtgctagacatgagttgccacctgcaacatctgcttctgctgtagatgcgtatgcaagtgatccatattacggctactcctattatggttcttcatcattggacccatatttggcaccccagaggagagaggaagttccttcgggatctttttctgttgttgggaggagagagaatcatctaattgaaactgatcctccgaggagagaaactgatcgtgtggagagattatattcaacacatgcttttggtgggaggagagagaactatctgattgagactgatcctgtgctaaggagagaaactgatcgtggagagagactatactcaatgcatgctgctcctgctgatgctgcatccggttataaccggacagaaaactaccaggcaaccaaggctgatgcattgcctgcgccagtttcatctcgttatgcttttgcaggtccgtcatactcctaccgctaaatggcgcccttgcatcccctgtatgtgggcttttttttctaggttttttttttttttttaaacaatagggaaaaaaactgcatgtgacaaatatttgaactttcagacccaaagaagggactaatacttttaacttgttagttgaatttgttaaatggtgctgccgaggttggcagtataaatgttggaacttatttattttgccttggcaagtttaaagagtaataataatgaaagggtagctttggattta
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]