2024-04-29 09:56:36, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_006882117 732 bp mRNA linear MAM 18-FEB-2014 DEFINITION PREDICTED: Elephantulus edwardii cysteine-rich secretory protein 2-like (LOC102847386), mRNA. ACCESSION XM_006882117 VERSION XM_006882117.1 DBLINK BioProject: PRJNA221636 KEYWORDS RefSeq. SOURCE Elephantulus edwardii (Cape elephant shrew) ORGANISM Elephantulus edwardii Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Elephantulus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006399767.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Elephantulus edwardii Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 5.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..732 /organism="Elephantulus edwardii" /mol_type="mRNA" /isolate="Elephantulus edwardi_28Jun2011" /db_xref="taxon:28737" /chromosome="Unknown" /sex="female" /country="South Africa" gene 1..732 /gene="LOC102847386" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins" /db_xref="GeneID:102847386" CDS 1..732 /gene="LOC102847386" /codon_start=1 /product="cysteine-rich secretory protein 2-like" /protein_id="XP_006882179.1" /db_xref="GeneID:102847386" /translation="
MTLLSSVLFLVAVLLPSFPANGMVPNFASLSTMLNEIQEEIVNKHNSLRKNVSPTAQNMLKMTWDKNATVNAQKWADMCQYEHSRQELRTTDTTCGENLYMSSDPNSWSDAIQSWYDEVNDFTYGIGAKSLGAVIGHYTQVVWDTSYRVGCGLAHCPNEDLPYFYVCQYCPAGNYENRVSTPYKKGPTCASCPNDCEDGLCTNSCSYYDNYSNCAELKEQVTCEYELVKNYCKATCLCEGKIY"
misc_feature 106..516 /gene="LOC102847386" /note="CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain of cysteine-rich secretory proteins; Region: CAP_CRISP; cd05383" /db_xref="CDD:349402" misc_feature 565..729 /gene="LOC102847386" /note="Region: Crisp; pfam08562" /db_xref="CDD:430075" ORIGIN
atgactttactctcaagtgtgctgttcctggtggctgtgctgcttccatccttccctgcaaatggaatggttccaaattttgctagtttgtcaactatgttaaatgaaatacaagaagagattgtgaataaacacaacagtctaaggaaaaatgtttctcccacagcccaaaacatgctgaagatgacatgggacaaaaatgcaacagtaaatgctcaaaaatgggcagatatgtgccaatatgaacacagtcgtcaagaactacgaacaaccgatacaacatgtggtgagaatctctatatgtccagtgatcctaattcatggtcagacgccatccaaagttggtacgatgaagtcaatgattttacatatggtataggagcaaagagtcttggtgcagttattggacattatactcaggttgtttgggacacatcttaccgtgttggttgtggccttgctcattgtcccaatgaagatttaccctatttctatgtctgtcaatactgtcctgccggtaattatgaaaatagagtgagtaccccctacaaaaaaggaccgacttgtgccagttgccctaacgactgtgaagatggactatgcaccaatagctgcagctattacgataattacagtaactgtgcagagctgaaggaacaggttacctgtgaatacgaattggtcaagaactattgtaaagccacctgcctttgtgaagggaaaatttattaa
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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