2024-04-26 17:49:21, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_003321112 381 bp mRNA linear PLN 13-NOV-2023 DEFINITION Puccinia graminis f. sp. tritici CRL 75-36-700-3 uncharacterized protein (PGTG_02202), partial mRNA. ACCESSION XM_003321112 VERSION XM_003321112.2 DBLINK BioProject: PRJNA66375 BioSample: SAMN00013043 KEYWORDS RefSeq. SOURCE Puccinia graminis f. sp. tritici CRL 75-36-700-3 ORGANISM Puccinia graminis f. sp. tritici CRL 75-36-700-3 Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia. REFERENCE 1 (bases 1 to 381) AUTHORS Birren,B., Lander,E., Galagan,J., Nusbaum,C., Devon,K., Cuomo,C., Jaffe,D., Butler,J., Alvarez,P., Gnerre,S., Grabherr,M., Mauceli,E., Brockman,W., Young,S., LaButti,K., Sykes,S., DeCaprio,D., Crawford,M., Koehrsen,M., Engels,R., Montgomery,P., Pearson,M., Howarth,C., Larson,L., White,J., Zeng,Q., Kodira,C., Yandava,C., Alvarado,L., O'Leary,S., Szabo,L., Dean,R. and Schein,J. CONSRTM The Broad Institute Genome Sequencing Platform TITLE The Genome Sequence of Puccinia graminis f. sp. tritici Strain CRL 75-36-700-3 JOURNAL Unpublished REFERENCE 2 (bases 1 to 381) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (12-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 381) AUTHORS Birren,B., Lander,E., Galagan,J., Nusbaum,C., Devon,K., Cuomo,C., Jaffe,D., Butler,J., Alvarez,P., Gnerre,S., Grabherr,M., Mauceli,E., Brockman,W., Young,S., LaButti,K., Sykes,S., DeCaprio,D., Crawford,M., Koehrsen,M., Engels,R., Montgomery,P., Pearson,M., Howarth,C., Larson,L., White,J., Zeng,Q., Kodira,C., Yandava,C., Alvarado,L., O'Leary,S., Szabo,L., Dean,R. and Schein,J. CONSRTM The Broad Institute Genome Sequencing Platform TITLE Direct Submission JOURNAL Submitted (10-FEB-2012) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA REMARK Annotation update by submitter REFERENCE 4 (bases 1 to 381) AUTHORS Birren,B., Lander,E., Galagan,J., Nusbaum,C., Devon,K., Cuomo,C., Jaffe,D., Butler,J., Alvarez,P., Gnerre,S., Grabherr,M., Mauceli,E., Brockman,W., Young,S., LaButti,K., Sykes,S., DeCaprio,D., Crawford,M., Koehrsen,M., Engels,R., Montgomery,P., Pearson,M., Howarth,C., Larson,L., White,J., Zeng,Q., Kodira,C., Yandava,C., Alvarado,L., O'Leary,S., Szabo,L., Dean,R. and Schein,J. CONSRTM The Broad Institute Genome Sequencing Platform TITLE Direct Submission JOURNAL Submitted (12-JAN-2007) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_003526553). On Sep 5, 2012 this sequence version replaced XM_003321112.1. COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..381 /organism="Puccinia graminis f. sp. tritici CRL 75-36-700-3" /mol_type="mRNA" /strain="CRL 75-36-700-3" /db_xref="taxon:418459" /chromosome="Unknown" /forma_specialis="tritici CRL 75-36-700-3" gene <1..>381 /locus_tag="PGTG_02202" /db_xref="GeneID:10528762" CDS 1..381 /locus_tag="PGTG_02202" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_003321160.2" /db_xref="GeneID:10528762" /translation="
MILCGYFDVACAGAATCQTLRELAAQLPSAFAAALAELKADNEAREGRAVNRHKETATQMATIKGELTSLKGQVGWVKDELTSLKEQVGLVKDELASVNTTAERIDSIKLIGSDNPGSKNPSRIML"
misc_feature 106..>315 /locus_tag="PGTG_02202" /note="transferase, transferring glycosyl groups; Region: PLN02939" /db_xref="CDD:215507" ORIGIN
atgattctttgtggttattttgatgttgcatgtgcaggggcagccacttgtcagactttgagggaactggctgctcagcttccctcagcattcgctgcagcacttgctgagttgaaggcagataatgaagcgcgagaagggagggcggtcaaccgtcacaaggaaacggcgacccagatggcgacaatcaagggcgagctcacatcactcaaggggcaagtaggatgggtgaaggacgagctcacatcactcaaggagcaagtaggattggtgaaggacgagttggctagcgtgaacaccaccgcggaacggatcgactcaatcaagctcattggctctgataatccgggatcaaagaatccttccagaatcatgctataa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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