2024-03-29 20:11:35, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_003285195 381 bp mRNA linear INV 23-OCT-2023 DEFINITION Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_22474), partial mRNA. ACCESSION XM_003285195 VERSION XM_003285195.1 DBLINK BioProject: PRJNA63531 BioSample: SAMN02744064 KEYWORDS RefSeq. SOURCE Dictyostelium purpureum ORGANISM Dictyostelium purpureum Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales; Dictyosteliaceae; Dictyostelium. REFERENCE 1 (bases 1 to 381) AUTHORS Sucgang,R., Kuo,A., Tian,X., Salerno,W., Parikh,A., Feasley,C.L., Dalin,E., Tu,H., Huang,E., Barry,K., Lindquist,E., Shapiro,H., Bruce,D., Schmutz,J., Salamov,A., Fey,P., Gaudet,P., Anjard,C., Mohan,M.B., Basu,S., Bushmanova,Y., van der Wel,H., Katoh-Kurasawa,M., Coutinho,P.M., Saito,T., Elias,M., Schaap,P., Kay,R.R., Henrissat,B., Eichinger,L., Rivero,F., Putnam,N.H., West,C.M., Loomis,W.F., Chisholm,R.L., Shaulsky,G., Strassmann,J.E., Queller,D.C., Kuspa,A. and Grigoriev,I.V. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Comparative genomics of the social amoebae Dictyostelium discoideum and Dictyostelium purpureum JOURNAL Unpublished REFERENCE 2 (bases 1 to 381) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-OCT-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 381) AUTHORS Kuo,A., Barry,K., Lindquist,E., Schmutz,J., Salamov,A., Pitluck,S., Lucas,S., Sucgang,R., Kuspa,A. and Grigoriev,I.V. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (26-APR-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_003519378). ##Metadata-START## Organism Display Name :: Dictyostelium purpureum QSDP1 GOLD Stamp ID :: Gi01364 Diseases :: None ##Metadata-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..381 /organism="Dictyostelium purpureum" /mol_type="mRNA" /strain="QSDP1" /db_xref="taxon:5786" /chromosome="Unknown" gene <1..>381 /locus_tag="DICPUDRAFT_22474" /db_xref="GeneID:10502561" CDS <1..>381 /locus_tag="DICPUDRAFT_22474" /note="hypothetical protein DDBDRAFT_0204554" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_003285243.1" /db_xref="GeneID:10502561" /db_xref="InterPro:IPR001383" /db_xref="JGIDB:Dicpu1_22474" /translation="
SFFNSLASLTTRAQVMKRAQRGLYGGKDILFGNILSFSNKKTRRDWKPNVHNKTYHSNLLGTDIRVRVTSYVIRCIDKAGSFDNYIVQTKDKDLQSELGSELKVAMKNVLKSKAIEILEQEAKQEQE"
misc_feature 58..231 /locus_tag="DICPUDRAFT_22474" /note="Ribosomal L28 family; Region: Ribosomal_L28; pfam00830" /db_xref="CDD:425892" ORIGIN
tcattcttcaactcattagcttcattaaccactagagctcaagttatgaaaagagctcaaagaggtttatacggtggaaaagatattctttttggaaatattttaagtttttcaaataaaaaaacaagaagagattggaaaccaaatgttcacaacaaaacttatcacagcaatcttttaggtacagatattagagttagagttacatcatatgttatcagatgtattgataaagcaggttcattcgataattatattgtacaaacaaaagataaagatttacaatcagaattaggttcagaattaaaagttgctatgaagaatgttttaaaaagtaaagcaattgaaattttagaacaagaagctaaacaagaacaagaa
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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