ver.2
Home
|
Help
|
Advanced search
Previous release (v1)
2025-12-15 14:03:05, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_002141116 372 bp mRNA linear INV 06-DEC-2023
DEFINITION Cryptosporidium muris RN66 prefoldin subunit 2, putative
(CMU_014790), partial mRNA.
ACCESSION XM_002141116
VERSION XM_002141116.1
DBLINK BioProject: PRJNA32283
BioSample: SAMN02953683
KEYWORDS RefSeq.
SOURCE Cryptosporidium muris RN66
ORGANISM Cryptosporidium muris RN66
Eukaryota; Sar; Alveolata; Apicomplexa; Conoidasida; Coccidia;
Eucoccidiorida; Eimeriorina; Cryptosporidiidae; Cryptosporidium.
REFERENCE 1 (bases 1 to 372)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 2 (bases 1 to 372)
AUTHORS Lorenzi,H., Inman,J., Miller,J., Schobel,S., Amedeo,P., Caler,E.V.
and da Silva,J.
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2008) J. Craig Venter Institute, 9704 Medical
Center Drive, Rockville, MD 20850, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NW_002196574).
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..372
/organism="Cryptosporidium muris RN66"
/mol_type="mRNA"
/strain="RN66"
/db_xref="taxon:441375"
/chromosome="Unknown"
gene <1..>372
/locus_tag="CMU_014790"
/db_xref="GeneID:6996218"
CDS 1..372
/locus_tag="CMU_014790"
/note="encoded by transcript CMU_014790A;
weak similarity to SP:Q9UHV9: Prefoldin subunit 2.
taxon:9606 {Homo sapiens;}"
/codon_start=1
/product="prefoldin subunit 2, putative"
/protein_id="XP_002141152.1"
/db_xref="GeneID:6996218"
/translation="
MVETGYTKETQEEIVQLDKKLKLLNNKISELTQDSKEYGLVLNAFEKVDENRRCFRVIGGVMVERNVKTVKPALEKEKSALDSAISELEKQYESIEEEMKNLIEKYSTNSADPAQITSSSSSQ"
misc_feature 25..318
/locus_tag="CMU_014790"
/note="prefoldin subunit 2; Region: Prefoldin_2; cd23163"
/db_xref="CDD:467479"
misc_feature 25..144
/locus_tag="CMU_014790"
/note="coiled coil [structural motif]; Region: coiled
coil"
/db_xref="CDD:467479"
misc_feature order(28..30,40..42,49..54,61..66,70..75,82..87,94..96,
256..258,265..267,277..279,289..291,298..303,310..315)
/locus_tag="CMU_014790"
/note="prefoldin beta subunit /TRiC interface [polypeptide
binding]; other site"
/db_xref="CDD:467479"
misc_feature order(121..123,130..132,142..147,154..174,178..195,
205..210,220..222)
/locus_tag="CMU_014790"
/note="prefoldin oligomer interface [polypeptide binding];
other site"
/db_xref="CDD:467479"
misc_feature 202..318
/locus_tag="CMU_014790"
/note="coiled coil [structural motif]; Region: coiled
coil"
/db_xref="CDD:467479"
ORIGIN
atggttgagacaggatatactaaggagacacaagaagagattgttcaactagataagaaactcaaactactaaacaataagatttcagagcttactcaagatagtaaagagtatggtctagtcttaaatgcatttgagaaggtagacgagaaccgacgatgttttagagttattggtggtgtgatggttgagagaaatgttaaaactgttaaacctgctcttgaaaaagaaaagagtgcgttagatagtgcaatttccgaattagagaagcagtatgaatctattgaagaggaaatgaagaatctaattgagaaatatagtacaaatagtgctgatcctgcacaaataactagttcatcaagctcgcaataa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]