2024-04-25 14:40:27, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_001554126 1556 bp mRNA linear PLN 17-APR-2018 DEFINITION Botrytis cinerea B05.10 hypothetical protein (BCIN_10g00280), mRNA. ACCESSION XM_001554126 VERSION XM_001554126.2 DBLINK BioProject: PRJNA20061 BioSample: SAMN02953628 KEYWORDS RefSeq. SOURCE Botrytis cinerea B05.10 ORGANISM Botrytis cinerea B05.10 Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Botrytis. REFERENCE 1 (bases 1 to 1556) AUTHORS Van Kan,J.A., Stassen,J.H., Mosbach,A., Van Der Lee,T.A., Faino,L., Farmer,A.D., Papasotiriou,D.G., Zhou,S., Seidl,M.F., Cottam,E., Edel,D., Hahn,M., Schwartz,D.C., Dietrich,R.A., Widdison,S. and Scalliet,G. TITLE A gapless genome sequence of the fungus Botrytis cinerea JOURNAL Mol. Plant Pathol. 18 (1), 75-89 (2017) PUBMED 26913498 REFERENCE 2 (bases 1 to 1556) AUTHORS Staats,M. and van Kan,J.A. TITLE Genome update of Botrytis cinerea strains B05.10 and T4 JOURNAL Eukaryotic Cell 11 (11), 1413-1414 (2012) PUBMED 23104368 REFERENCE 3 (bases 1 to 1556) AUTHORS Amselem,J., Cuomo,C.A., van Kan,J.A., Viaud,M., Benito,E.P., Couloux,A., Coutinho,P.M., de Vries,R.P., Dyer,P.S., Fillinger,S., Fournier,E., Gout,L., Hahn,M., Kohn,L., Lapalu,N., Plummer,K.M., Pradier,J.M., Quevillon,E., Sharon,A., Simon,A., ten Have,A., Tudzynski,B., Tudzynski,P., Wincker,P., Andrew,M., Anthouard,V., Beever,R.E., Beffa,R., Benoit,I., Bouzid,O., Brault,B., Chen,Z., Choquer,M., Collemare,J., Cotton,P., Danchin,E.G., Da Silva,C., Gautier,A., Giraud,C., Giraud,T., Gonzalez,C., Grossetete,S., Guldener,U., Henrissat,B., Howlett,B.J., Kodira,C., Kretschmer,M., Lappartient,A., Leroch,M., Levis,C., Mauceli,E., Neuveglise,C., Oeser,B., Pearson,M., Poulain,J., Poussereau,N., Quesneville,H., Rascle,C., Schumacher,J., Segurens,B., Sexton,A., Silva,E., Sirven,C., Soanes,D.M., Talbot,N.J., Templeton,M., Yandava,C., Yarden,O., Zeng,Q., Rollins,J.A., Lebrun,M.H. and Dickman,M. TITLE Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea JOURNAL PLoS Genet. 7 (8), e1002230 (2011) PUBMED 21876677 REFERENCE 4 (bases 1 to 1556) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (16-APR-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1556) AUTHORS van Kan,J. TITLE Direct Submission JOURNAL Submitted (04-DEC-2017) Phytopathology, Wageningen University, Droevendaalsesteeg 1, Wageningen 6708PB, Netherlands REMARK Annotation update by submitter REFERENCE 6 (bases 1 to 1556) AUTHORS van Kan,J. TITLE Direct Submission JOURNAL Submitted (03-NOV-2017) Phytopathology, Wageningen University, Droevendaalsesteeg 1, Wageningen 6708PB, Netherlands REFERENCE 7 (bases 1 to 1556) AUTHORS Staats,M. and van Kan,J.A.L. TITLE Direct Submission JOURNAL Submitted (20-JUN-2012) Biosystematics Group, Wageningen University, Droevendaalsesteeg 1, Wageningen 6708PB, Netherlands COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_037319). On Apr 17, 2018 this sequence version replaced XM_001554126.1. FEATURES Location/Qualifiers source 1..1556 /organism="Botrytis cinerea B05.10" /mol_type="mRNA" /strain="B05.10" /db_xref="taxon:332648" /chromosome="10" /mating_type="MAT1-1" /country="Germany: Munster" /collection_date="1995" /collected_by="P. Buettner" gene 1..1556 /locus_tag="BCIN_10g00280" /old_locus_tag="BC1G_07313" /db_xref="GeneID:5434732" CDS 152..1375 /locus_tag="BCIN_10g00280" /old_locus_tag="BC1G_07313" /codon_start=1 /product="hypothetical protein" /protein_id="XP_001554176.1" /db_xref="GeneID:5434732" /translation="
MTTTRSGLNSASNVKQKLNTKQKRKTKAKTTPTRKNAQSTPENTKSASKTMITRSSERIADARLKMKIAKASPKNTPSSSRTMVTRSSGINVHTSLENVQPALKRMRARSSKINVDASPEILNSKIHIEASTPSVDARVIIVIRDSDSDADDDDDDDDDDDDDGDGVEDGNEVGDENEVEDGNEVGDKVGDGFDDEVDEDEVDEDEVDEDEVDEDEVDEDEADEAGEGVGRDNVGDADANANANATPMFIPMHIVELDTTSNMDLIPSMTADWDSPNLGYLMEMGSEAEPEPELALGLDPGLEYHGTGDDYLLSPDLLLDMGMDVDMGMDVGMDVDMDMDTDMNTNIDVYAEINTSPSHTSWQGMYMNPPLTPEERGWNFSDVGIEEIDGLFEEMEWGPRGVADVDM"
ORIGIN
gtttccatataaacccgccttcccacgaatcaactctcgatatctttcatagacattcttgacttagatctcctcgacttaaacctcctcgacacagatccgaagatctcaaaccaaaaacttcattaccaagtaaatgctccacctcaaaatgacgaccacgagatcaggattaaattctgcgtcgaatgtaaagcagaagcttaacacgaagcaaaagcgaaagaccaaagcaaagacaaccccaacgagaaaaaatgcacaatctaccccggaaaacacaaaatcggcctcgaaaacaatgatcactcggagttcagaaagaattgcagatgcacgtctgaagatgaagattgccaaagctagcccgaagaatacaccatcgtcttcgagaacaatggtcacgaggagctcagggataaatgtacatacaagcctggagaatgtacaaccggctttgaagcgaatgcgcgctcggagctcaaagataaatgtagatgcgagcccggagattttgaattcgaagatacatattgaggcttccactccgagtgttgatgcgagagtgataattgtgatccgggattcggattcggatgctgatgacgatgacgatgatgatgatgatgatgatgacgacggagatggagttgaggatgggaatgaagttggagatgagaatgaagttgaagatgggaatgaagttggagataaagttggagatggttttgatgatgaagttgatgaggatgaagttgatgaggacgaagttgatgaggacgaagttgatgaggacgaagttgatgaggacgaagctgatgaagctggagagggagttggtcgagataacgttggagatgcggatgcgaatgcgaatgcgaatgcaaccccaatgtttattccaatgcatattgtcgagctagatacaacttcaaatatggatttgatacccagtatgaccgctgattgggattctccaaatctaggatatctgatggaaatgggttcagaagcagagccagaaccagaactagctttgggattagatccaggattagaatatcacggcactggagatgattatcttttatcccctgatttgctcctagatatgggtatggatgtggatatgggcatggatgtgggcatggacgtggatatggatatggatacagatatgaataccaacatagatgtatacgcagaaatcaacacaagtccatcgcatacctcctggcaaggaatgtatatgaatccacctctgacaccggaagagaggggttggaacttttcggatgtgggaatagaggagattgatgggttgtttgaggagatggagtgggggccgagaggagttgcggatgttgatatgtagatgggggaggaggtgagaggtgagaggaggtatggaagaacgaaaggaacatccacagacacagacaccaacacaggcacccaaacaaaaacaggaaacgaaaaatagaggaaaggtagaagggaaaaagaaagaaagtcggggaaagcgcttgagaatcagagagaaggattgagagtca
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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