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2024-04-25 14:40:27, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_001554126            1556 bp    mRNA    linear   PLN 17-APR-2018
DEFINITION  Botrytis cinerea B05.10 hypothetical protein (BCIN_10g00280), mRNA.
ACCESSION   XM_001554126
VERSION     XM_001554126.2
DBLINK      BioProject: PRJNA20061
            BioSample: SAMN02953628
KEYWORDS    RefSeq.
SOURCE      Botrytis cinerea B05.10
  ORGANISM  Botrytis cinerea B05.10
            Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
            Leotiomycetes; Helotiales; Sclerotiniaceae; Botrytis.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Van Kan,J.A., Stassen,J.H., Mosbach,A., Van Der Lee,T.A., Faino,L.,
            Farmer,A.D., Papasotiriou,D.G., Zhou,S., Seidl,M.F., Cottam,E.,
            Edel,D., Hahn,M., Schwartz,D.C., Dietrich,R.A., Widdison,S. and
            Scalliet,G.
  TITLE     A gapless genome sequence of the fungus Botrytis cinerea
  JOURNAL   Mol. Plant Pathol. 18 (1), 75-89 (2017)
   PUBMED   26913498
REFERENCE   2  (bases 1 to 1556)
  AUTHORS   Staats,M. and van Kan,J.A.
  TITLE     Genome update of Botrytis cinerea strains B05.10 and T4
  JOURNAL   Eukaryotic Cell 11 (11), 1413-1414 (2012)
   PUBMED   23104368
REFERENCE   3  (bases 1 to 1556)
  AUTHORS   Amselem,J., Cuomo,C.A., van Kan,J.A., Viaud,M., Benito,E.P.,
            Couloux,A., Coutinho,P.M., de Vries,R.P., Dyer,P.S., Fillinger,S.,
            Fournier,E., Gout,L., Hahn,M., Kohn,L., Lapalu,N., Plummer,K.M.,
            Pradier,J.M., Quevillon,E., Sharon,A., Simon,A., ten Have,A.,
            Tudzynski,B., Tudzynski,P., Wincker,P., Andrew,M., Anthouard,V.,
            Beever,R.E., Beffa,R., Benoit,I., Bouzid,O., Brault,B., Chen,Z.,
            Choquer,M., Collemare,J., Cotton,P., Danchin,E.G., Da Silva,C.,
            Gautier,A., Giraud,C., Giraud,T., Gonzalez,C., Grossetete,S.,
            Guldener,U., Henrissat,B., Howlett,B.J., Kodira,C., Kretschmer,M.,
            Lappartient,A., Leroch,M., Levis,C., Mauceli,E., Neuveglise,C.,
            Oeser,B., Pearson,M., Poulain,J., Poussereau,N., Quesneville,H.,
            Rascle,C., Schumacher,J., Segurens,B., Sexton,A., Silva,E.,
            Sirven,C., Soanes,D.M., Talbot,N.J., Templeton,M., Yandava,C.,
            Yarden,O., Zeng,Q., Rollins,J.A., Lebrun,M.H. and Dickman,M.
  TITLE     Genomic analysis of the necrotrophic fungal pathogens Sclerotinia
            sclerotiorum and Botrytis cinerea
  JOURNAL   PLoS Genet. 7 (8), e1002230 (2011)
   PUBMED   21876677
REFERENCE   4  (bases 1 to 1556)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2018) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (bases 1 to 1556)
  AUTHORS   van Kan,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2017) Phytopathology, Wageningen University,
            Droevendaalsesteeg 1, Wageningen 6708PB, Netherlands
  REMARK    Annotation update by submitter
REFERENCE   6  (bases 1 to 1556)
  AUTHORS   van Kan,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-NOV-2017) Phytopathology, Wageningen University,
            Droevendaalsesteeg 1, Wageningen 6708PB, Netherlands
REFERENCE   7  (bases 1 to 1556)
  AUTHORS   Staats,M. and van Kan,J.A.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JUN-2012) Biosystematics Group, Wageningen
            University, Droevendaalsesteeg 1, Wageningen 6708PB, Netherlands
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_037319).
            
            On Apr 17, 2018 this sequence version replaced XM_001554126.1.
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Botrytis cinerea B05.10"
                     /mol_type="mRNA"
                     /strain="B05.10"
                     /db_xref="taxon:332648"
                     /chromosome="10"
                     /mating_type="MAT1-1"
                     /country="Germany: Munster"
                     /collection_date="1995"
                     /collected_by="P. Buettner"
     gene            1..1556
                     /locus_tag="BCIN_10g00280"
                     /old_locus_tag="BC1G_07313"
                     /db_xref="GeneID:5434732"
     CDS             152..1375
                     /locus_tag="BCIN_10g00280"
                     /old_locus_tag="BC1G_07313"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="XP_001554176.1"
                     /db_xref="GeneID:5434732"
                     /translation="
MTTTRSGLNSASNVKQKLNTKQKRKTKAKTTPTRKNAQSTPENTKSASKTMITRSSERIADARLKMKIAKASPKNTPSSSRTMVTRSSGINVHTSLENVQPALKRMRARSSKINVDASPEILNSKIHIEASTPSVDARVIIVIRDSDSDADDDDDDDDDDDDDGDGVEDGNEVGDENEVEDGNEVGDKVGDGFDDEVDEDEVDEDEVDEDEVDEDEVDEDEADEAGEGVGRDNVGDADANANANATPMFIPMHIVELDTTSNMDLIPSMTADWDSPNLGYLMEMGSEAEPEPELALGLDPGLEYHGTGDDYLLSPDLLLDMGMDVDMGMDVGMDVDMDMDTDMNTNIDVYAEINTSPSHTSWQGMYMNPPLTPEERGWNFSDVGIEEIDGLFEEMEWGPRGVADVDM"
ORIGIN      
gtttccatataaacccgccttcccacgaatcaactctcgatatctttcatagacattcttgacttagatctcctcgacttaaacctcctcgacacagatccgaagatctcaaaccaaaaacttcattaccaagtaaatgctccacctcaaaatgacgaccacgagatcaggattaaattctgcgtcgaatgtaaagcagaagcttaacacgaagcaaaagcgaaagaccaaagcaaagacaaccccaacgagaaaaaatgcacaatctaccccggaaaacacaaaatcggcctcgaaaacaatgatcactcggagttcagaaagaattgcagatgcacgtctgaagatgaagattgccaaagctagcccgaagaatacaccatcgtcttcgagaacaatggtcacgaggagctcagggataaatgtacatacaagcctggagaatgtacaaccggctttgaagcgaatgcgcgctcggagctcaaagataaatgtagatgcgagcccggagattttgaattcgaagatacatattgaggcttccactccgagtgttgatgcgagagtgataattgtgatccgggattcggattcggatgctgatgacgatgacgatgatgatgatgatgatgatgacgacggagatggagttgaggatgggaatgaagttggagatgagaatgaagttgaagatgggaatgaagttggagataaagttggagatggttttgatgatgaagttgatgaggatgaagttgatgaggacgaagttgatgaggacgaagttgatgaggacgaagttgatgaggacgaagctgatgaagctggagagggagttggtcgagataacgttggagatgcggatgcgaatgcgaatgcgaatgcaaccccaatgtttattccaatgcatattgtcgagctagatacaacttcaaatatggatttgatacccagtatgaccgctgattgggattctccaaatctaggatatctgatggaaatgggttcagaagcagagccagaaccagaactagctttgggattagatccaggattagaatatcacggcactggagatgattatcttttatcccctgatttgctcctagatatgggtatggatgtggatatgggcatggatgtgggcatggacgtggatatggatatggatacagatatgaataccaacatagatgtatacgcagaaatcaacacaagtccatcgcatacctcctggcaaggaatgtatatgaatccacctctgacaccggaagagaggggttggaacttttcggatgtgggaatagaggagattgatgggttgtttgaggagatggagtgggggccgagaggagttgcggatgttgatatgtagatgggggaggaggtgagaggtgagaggaggtatggaagaacgaaaggaacatccacagacacagacaccaacacaggcacccaaacaaaaacaggaaacgaaaaatagaggaaaggtagaagggaaaaagaaagaaagtcggggaaagcgcttgagaatcagagagaaggattgagagtca
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]