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2024-05-03 13:44:54, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_001392047            1161 bp    mRNA    linear   PLN 20-OCT-2023
DEFINITION  Aspergillus niger uncharacterized protein (An07g10090), partial
            mRNA.
ACCESSION   XM_001392047
VERSION     XM_001392047.3
DBLINK      BioProject: PRJNA19263
            BioSample: SAMEA3283178
KEYWORDS    RefSeq.
SOURCE      Aspergillus niger
  ORGANISM  Aspergillus niger
            Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
            Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae;
            Aspergillus; Aspergillus subgen. Circumdati.
REFERENCE   1  (bases 1 to 1161)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NT_166523).
            
            On Sep 27, 2023 this sequence version replaced XM_001392047.2.
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Aspergillus niger"
                     /mol_type="mRNA"
                     /db_xref="taxon:5061"
                     /chromosome="IV"
                     /map="unlocalized"
                     /clone="An07"
     gene            <1..>1161
                     /locus_tag="An07g10090"
                     /db_xref="GeneID:4982278"
     CDS             1..1161
                     /locus_tag="An07g10090"
                     /EC_number="1.3.1.20"
                     /inference="profile:COGS:COG0673"
                     /inference="profile:PFAM:PF01408"
                     /inference="similar to AA sequence:UniProtKB:AB021931.1"
                     /note="Catalytic activity: dimeric dihydrodiol
                     dehydrogenases (= trans-1,2-dihydrobenzene-1,2-diol
                     dehydrogenases) convert trans-1,2-dihydrobenzene-1,2-diol
                     + NADP(+) <=> catechol + NADPH.;
                     Function: JMO2DD of M. fuscat has additionally to its
                     3-deoxyglucosone reductase function an activity of
                     NADP-dependent D-xylose dehydrogenase (EC 1. 1. 1. 179).;
                     Remark: JMO2DD of M. fuscata is also called CMO2DD.;
                     Title: strong similarity to dimeric dihydrodiol
                     dehydrogenase JMO2DD - Macaca fuscata;
                     See PMID 10477285"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_001392084.1"
                     /db_xref="GeneID:4982278"
                     /db_xref="GOA:A2QPN8"
                     /db_xref="InterPro:IPR000683"
                     /db_xref="InterPro:IPR016040"
                     /db_xref="UniProtKB/TrEMBL:A2QPN8"
                     /translation="
MAPHNIRWGIMATGWIADVFTRDLLRDPNVRNVTDVSHTVVAVASSSNAARAEKFISDTGIPSPCAAYGSYEDLVADANVDVVYVATPHSHHFQNVMLALNAGKHVLCEKAFTVNAAQAKILCETAQKKNLFLMEAVWTRYFPLSIQIRDLIKQGAIGEVLRVISDNSFGDPVEERWGTEHRMVNKDLAGGCLLDLGIYSLTWVFQTLYHTLPRDQRKPPSAISAHMTLYHLTGADEATTILLSFPTSTPSNLPHPGQSQAVAMTHLRVSTDPDEANTARPAIRIQGTKGEIQVDGPAFRPERYRIIPAKGEGEVKEVECPFPGGGKGMFWEADEVARCLRDGKLESETLPWEESIVIMEVMDEVRRQGGLTYPEKIESTVYPTQL"
     misc_feature    16..1101
                     /locus_tag="An07g10090"
                     /note="Predicted dehydrogenase [General function
                     prediction only]; Region: MviM; COG0673"
                     /db_xref="CDD:223745"
ORIGIN      
atggctccccacaacatccggtggggtatcatggctacggggtggatcgccgatgtcttcacccgtgacctccttagagaccccaacgtccgcaacgtcaccgacgtctctcacaccgtcgtggccgtagcatcctcctccaacgccgcacgagcagagaaattcatctcagacaccggtatcccatccccctgtgccgcctatggctcctatgaagatcttgtagccgacgccaacgtcgatgtcgtttacgtcgcaactccgcactcccaccacttccagaatgtcatgctggctcttaacgccggaaaacatgtcctctgtgagaaggccttcaccgtcaatgctgctcaggccaagatcctatgcgagaccgctcagaagaagaatctcttcctcatggaagctgtctggactcgctacttccctctcagtatccagatcagagatttgatcaagcagggcgctatcggcgaggttttgcgggtcatctctgataacagtttcggagacccggttgaggagagatggggcacggagcatcgtatggttaataaggatttggcgggtggttgtctgttggatttgggaatctactccctaacctgggtcttccagaccctttatcacaccctcccccgggaccaacgtaaacctccctctgccatctccgcccatatgacactttaccatctaacgggcgccgacgaggccactaccatcctcttgagcttcccgaccagcactccctccaacctacctcatccgggccagtcgcaggccgtggccatgacgcatctccgcgtctctactgaccccgatgaggcaaacaccgcccgcccggccatccggatccagggtacgaagggtgagatccaggtggatgggccggcgttccggcctgagcgataccgtattatccccgccaagggagagggtgaggttaaggaggttgagtgtccgttccctggcggtgggaagggtatgttctgggaggcggatgaggtggcgcggtgcctgagggatggaaagctggagagcgagactctgccgtgggaggagagtatcgtgattatggaggtgatggatgaggttagacggcagggagggttgacttatccggagaagatcgagtcgactgtgtatcctacgcagctgtag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]