2024-05-03 13:44:54, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_001392047 1161 bp mRNA linear PLN 20-OCT-2023 DEFINITION Aspergillus niger uncharacterized protein (An07g10090), partial mRNA. ACCESSION XM_001392047 VERSION XM_001392047.3 DBLINK BioProject: PRJNA19263 BioSample: SAMEA3283178 KEYWORDS RefSeq. SOURCE Aspergillus niger ORGANISM Aspergillus niger Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati. REFERENCE 1 (bases 1 to 1161) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-OCT-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NT_166523). On Sep 27, 2023 this sequence version replaced XM_001392047.2. COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1161 /organism="Aspergillus niger" /mol_type="mRNA" /db_xref="taxon:5061" /chromosome="IV" /map="unlocalized" /clone="An07" gene <1..>1161 /locus_tag="An07g10090" /db_xref="GeneID:4982278" CDS 1..1161 /locus_tag="An07g10090" /EC_number="1.3.1.20" /inference="profile:COGS:COG0673" /inference="profile:PFAM:PF01408" /inference="similar to AA sequence:UniProtKB:AB021931.1" /note="Catalytic activity: dimeric dihydrodiol dehydrogenases (= trans-1,2-dihydrobenzene-1,2-diol dehydrogenases) convert trans-1,2-dihydrobenzene-1,2-diol + NADP(+) <=> catechol + NADPH.; Function: JMO2DD of M. fuscat has additionally to its 3-deoxyglucosone reductase function an activity of NADP-dependent D-xylose dehydrogenase (EC 1. 1. 1. 179).; Remark: JMO2DD of M. fuscata is also called CMO2DD.; Title: strong similarity to dimeric dihydrodiol dehydrogenase JMO2DD - Macaca fuscata; See PMID 10477285" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_001392084.1" /db_xref="GeneID:4982278" /db_xref="GOA:A2QPN8" /db_xref="InterPro:IPR000683" /db_xref="InterPro:IPR016040" /db_xref="UniProtKB/TrEMBL:A2QPN8" /translation="
MAPHNIRWGIMATGWIADVFTRDLLRDPNVRNVTDVSHTVVAVASSSNAARAEKFISDTGIPSPCAAYGSYEDLVADANVDVVYVATPHSHHFQNVMLALNAGKHVLCEKAFTVNAAQAKILCETAQKKNLFLMEAVWTRYFPLSIQIRDLIKQGAIGEVLRVISDNSFGDPVEERWGTEHRMVNKDLAGGCLLDLGIYSLTWVFQTLYHTLPRDQRKPPSAISAHMTLYHLTGADEATTILLSFPTSTPSNLPHPGQSQAVAMTHLRVSTDPDEANTARPAIRIQGTKGEIQVDGPAFRPERYRIIPAKGEGEVKEVECPFPGGGKGMFWEADEVARCLRDGKLESETLPWEESIVIMEVMDEVRRQGGLTYPEKIESTVYPTQL"
misc_feature 16..1101 /locus_tag="An07g10090" /note="Predicted dehydrogenase [General function prediction only]; Region: MviM; COG0673" /db_xref="CDD:223745" ORIGIN
atggctccccacaacatccggtggggtatcatggctacggggtggatcgccgatgtcttcacccgtgacctccttagagaccccaacgtccgcaacgtcaccgacgtctctcacaccgtcgtggccgtagcatcctcctccaacgccgcacgagcagagaaattcatctcagacaccggtatcccatccccctgtgccgcctatggctcctatgaagatcttgtagccgacgccaacgtcgatgtcgtttacgtcgcaactccgcactcccaccacttccagaatgtcatgctggctcttaacgccggaaaacatgtcctctgtgagaaggccttcaccgtcaatgctgctcaggccaagatcctatgcgagaccgctcagaagaagaatctcttcctcatggaagctgtctggactcgctacttccctctcagtatccagatcagagatttgatcaagcagggcgctatcggcgaggttttgcgggtcatctctgataacagtttcggagacccggttgaggagagatggggcacggagcatcgtatggttaataaggatttggcgggtggttgtctgttggatttgggaatctactccctaacctgggtcttccagaccctttatcacaccctcccccgggaccaacgtaaacctccctctgccatctccgcccatatgacactttaccatctaacgggcgccgacgaggccactaccatcctcttgagcttcccgaccagcactccctccaacctacctcatccgggccagtcgcaggccgtggccatgacgcatctccgcgtctctactgaccccgatgaggcaaacaccgcccgcccggccatccggatccagggtacgaagggtgagatccaggtggatgggccggcgttccggcctgagcgataccgtattatccccgccaagggagagggtgaggttaaggaggttgagtgtccgttccctggcggtgggaagggtatgttctgggaggcggatgaggtggcgcggtgcctgagggatggaaagctggagagcgagactctgccgtgggaggagagtatcgtgattatggaggtgatggatgaggttagacggcagggagggttgacttatccggagaagatcgagtcgactgtgtatcctacgcagctgtag
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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