2024-05-03 19:55:24, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_001391587 777 bp mRNA linear PLN 20-OCT-2023 DEFINITION Aspergillus niger uncharacterized protein (An07g05440), partial mRNA. ACCESSION XM_001391587 VERSION XM_001391587.1 DBLINK BioProject: PRJNA19263 BioSample: SAMEA3283178 KEYWORDS RefSeq. SOURCE Aspergillus niger ORGANISM Aspergillus niger Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati. REFERENCE 1 (bases 1 to 777) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (20-OCT-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NT_166523). COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..777 /organism="Aspergillus niger" /mol_type="mRNA" /db_xref="taxon:5061" /chromosome="IV" /map="unlocalized" /clone="An07" gene <1..>777 /locus_tag="An07g05440" /db_xref="GeneID:4981811" CDS 1..777 /locus_tag="An07g05440" /EC_number="1.1.1.-" /inference="profile:COGS:COG1028" /inference="profile:PFAM:PF00106" /note="Function: maleylacetate reductases contribute to the bacterial catabolism of some usual aromatic compounds like quinol or resorcinol and also to the degradation of aromatic compounds carrying unusual substituents, such as halogen atoms or nitro groups.; Similarity: the ORF shows similarity to several short-chain dehydrogenase/reductase from different species and with various function, most of which are 3-oxoacyl-(acyl carrier protein) reductases, that are involved in fatty acid biosynthesis (EC 1. 1. 1. 100).; Title: strong similarity to maleylacetate reductase macA - Rhodococcus opacus" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_001391624.1" /db_xref="GeneID:4981811" /db_xref="GOA:A2QNF1" /db_xref="InterPro:IPR002347" /db_xref="InterPro:IPR016040" /db_xref="UniProtKB/TrEMBL:A2QNF1" /translation="
MSSGSYNYNKLAGKHVLIFGGTSGIGLGVAKLSLAASAKVTVSSSSSKRIESTVQDLKSEFPNAQLQGHVCDLSKDTIEEDFEALFQKTNQVDHIVFTATDAPAIMPVQEITREKLIAAGQVRFFAAVLVAKIGSRYLSPGPDSSITLTTGTNWEHPMPNWTAVAGYLGGTCSVVCNLAVDLKPIRVNAVSPGLVKTPLWNNLMSEEEQEKICQFSAAKNPTGRVAQPEEVAEAYLYLMKDTNITGRIVSTDSGALLV"
misc_feature 49..774 /locus_tag="An07g05440" /note="SDR family oxidoreductase; Region: PRK07041" /db_xref="CDD:235914" ORIGIN
atgtcctccggcagctacaactacaataaactcgcgggcaagcatgtcctgattttcggaggcacctccggcataggcctgggtgtggccaagctttcactagccgcatcagccaaagtcactgtgtcttcatcctcaagcaaacgcattgaatccaccgtccaggatctcaagtcggaattcccaaatgcccagctccaaggacacgtctgcgatctttccaaagacacgatcgaagaagacttcgaagcgctattccaaaagaccaaccaagttgatcacattgttttcaccgcaaccgatgcgccagccatcatgcccgtgcaagaaatcactcgggagaagctcatcgctgccggtcaagtgcgctttttcgcggccgtactcgtcgccaagattggctctcgatacctctccccgggtccggattcatcaattaccttgacgacaggaactaattgggaacatccgatgcccaactggacggcggtagctggatacttaggtggtacttgcagtgttgtgtgtaatctagcggtggatttgaagccgatacgtgttaacgctgtgagtcctggactggtgaaaactcccctatggaacaatctgatgagtgaagaggagcaagaaaagatatgccagttttccgcagcgaaaaatccgacgggaagggttgctcagccggaagaagtggcagaggcttatctatatttgatgaaggatacgaacattaccgggcggatagtgagtacggattcgggtgctttacttgtttaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]