2024-05-02 16:02:12, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NR_167710 1049 bp RNA linear ROD 07-AUG-2023 DEFINITION Mus musculus phosphatidylinositol-4-phosphate 5-kinase, type 1 beta, opposite strand (Pip5k1bos), transcript variant 1, long non-coding RNA. ACCESSION NR_167710 XR_386616 VERSION NR_167710.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1049) AUTHORS Harrow JL, Steward CA, Frankish A, Gilbert JG, Gonzalez JM, Loveland JE, Mudge J, Sheppard D, Thomas M, Trevanion S and Wilming LG. TITLE The Vertebrate Genome Annotation browser 10 years on JOURNAL Nucleic Acids Res 42 (Database issue), D771-D779 (2014) PUBMED 24316575 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC165089.5. On Apr 17, 2020 this sequence version replaced XR_386616.3. ##Evidence-Data-START## Transcript exon combination :: CN840178.1, AK015163.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849384 [ECO:0000348] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-182 AC165089.5 209642-209823 183-267 AC165089.5 211563-211647 268-398 AC165089.5 212545-212675 399-1049 AC165089.5 223677-224327 FEATURES Location/Qualifiers source 1..1049 /organism="Mus musculus" /mol_type="transcribed RNA" /strain="C57BL/6" /db_xref="taxon:10090" /chromosome="19" /map="19 19.52 cM" gene 1..1049 /gene="Pip5k1bos" /gene_synonym="4930418C01Rik" /note="phosphatidylinositol-4-phosphate 5-kinase, type 1 beta, opposite strand" /db_xref="GeneID:102637283" /db_xref="MGI:MGI:1922106" ncRNA 1..1049 /ncRNA_class="lncRNA" /gene="Pip5k1bos" /gene_synonym="4930418C01Rik" /product="phosphatidylinositol-4-phosphate 5-kinase, type 1 beta, opposite strand, transcript variant 1" /db_xref="GeneID:102637283" /db_xref="MGI:MGI:1922106" exon 1..182 /gene="Pip5k1bos" /gene_synonym="4930418C01Rik" /inference="alignment:Splign:2.1.0" exon 183..267 /gene="Pip5k1bos" /gene_synonym="4930418C01Rik" /inference="alignment:Splign:2.1.0" exon 268..398 /gene="Pip5k1bos" /gene_synonym="4930418C01Rik" /inference="alignment:Splign:2.1.0" exon 399..1049 /gene="Pip5k1bos" /gene_synonym="4930418C01Rik" /inference="alignment:Splign:2.1.0" ORIGIN
agcaacaggcaggcttctgaactaaacacacacctgatttggttatctagcttgagagaaacttctgccatccagttgggtaaacgaatgagcttttgagagaatgaactagtatgtgaacagaagtgaacgcaagcagccttggcttctgcagaccaccaccaactagggctgccaggcagtgatggtgactattctcaacagactgcaaaatccacagtgaatgtcaaattccttccaaaggaaaggattgattctgttattgaggtagggagacataagcagttctgatgtgagaaaagggaagaggctaaagaggaaagtgacacacaatgggagaaggacccaaccctgccccttgtctttgaagaggatggaaggggccatgaaccaggaataatccacaattctagcatttgaaatctcgatattttcctatgtgacccctttacaaaaatcttcaggggtacacaccaagcacagggaggttgtgataaagagagctaagtcatgggccttgtggcaagaagatctgctgctccgatgggaaccccctggccccaccatgcaggaggcaggtcatcaccttatattcagtctttgcattagaaaatgaagcagcattgttcactatgagcaggaacaacagctgcagtggagtctggacacagggacagaaatgccccagaccctgtcctgtcctaatatcaaacacaactatgttgtggtgtctgttccctataatgggttatgaacttagaatggaatctcctctggggatattttagggacacccatgtaatggttgctgaaactggggatcaaagacagagtactggtggttgcaagagatagggcacagccaaccactccaaggccccctccaatgtgagtgcagaaagtggccatcttttgttgaccccattggagaaacagactgatgagatggcttgcttccctggtgggctctctctgaagctgctggttcactcgctcaatgatatgtgacatctcactgcaaggaataaaggactatttgataacatgta
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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