2024-05-02 20:54:20, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NR_045362 1927 bp RNA linear ROD 23-FEB-2022 DEFINITION Mus musculus predicted gene 6602 (Gm6602), long non-coding RNA. ACCESSION NR_045362 VERSION NR_045362.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1927) AUTHORS Carninci P and Hayashizaki Y. TITLE High-efficiency full-length cDNA cloning JOURNAL Methods Enzymol 303, 19-44 (1999) PUBMED 10349636 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC102031.7, AC170875.2 and AC118591.7. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AK090313.1 [ECO:0000332] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-384 AC102031.7 159064-159447 385-497 AC170875.2 40941-41053 c 498-555 AC118591.7 104253-104310 c 556-1927 AC118591.7 73044-74415 c FEATURES Location/Qualifiers source 1..1927 /organism="Mus musculus" /mol_type="transcribed RNA" /strain="C57BL/6" /db_xref="taxon:10090" /chromosome="3" /map="3" gene 1..1927 /gene="Gm6602" /gene_synonym="625585" /note="predicted gene 6602" /db_xref="GeneID:625585" /db_xref="MGI:MGI:3779614" ncRNA 1..1927 /ncRNA_class="lncRNA" /gene="Gm6602" /gene_synonym="625585" /product="predicted gene 6602" /db_xref="GeneID:625585" /db_xref="MGI:MGI:3779614" exon 1..384 /gene="Gm6602" /gene_synonym="625585" /inference="alignment:Splign:2.1.0" exon 385..497 /gene="Gm6602" /gene_synonym="625585" /inference="alignment:Splign:2.1.0" exon 498..555 /gene="Gm6602" /gene_synonym="625585" /inference="alignment:Splign:2.1.0" exon 556..1927 /gene="Gm6602" /gene_synonym="625585" /inference="alignment:Splign:2.1.0" ORIGIN
atgctcaagaagaacttgcattgaacatgaaagggaaacagctatttgggagatgaacatttcagatttttctcagagttcattttgttaaccatagaaaaatctgtttctgggttaatcaaagagacagcaacaaggaaggaagccaggatataacacaagccgaaaggatccctgacctccagctgaaaagagctgaaaatatttcatctttctgtgagaggtggttgcaagatttaaccacacacagtaatgagctattcaaagtttagacagataaattacattatttgaaattttttcctacaaagatgagtttgactatgaaggaaatgtttgaagaagaagaagcagagttaacagacaaaggatgctagagtagaggctgccagcagaaagtgtgaatcagatttaagatggatcttcccacctctagtgaaagacagatctggattaatactgtatttacacaccacgaatatctggatttgaaagaaattacttatcaaatggaagccaactttaggaaagaggaaataaatatcaaagtaccagaaaaacatacaatcttggggttcactctgtgttcaaatatcctacaacaaaataaaaaaccaaaaccagcaaatgcataagaaaagaagcaatgcggcacaagtcccttccggtccactgcagctccagggttcctggcccggggagtctccggacacctgaaaggaaccacacaggatcccctacaggaccccaagacctctggtgagtgaaacacaacttcgccaggaggcaagtttgaacaccagatatttgggcaccttccctgcaagaggatgctccaacatgtaataaggacacatgctccactttgttcatagcatccttatttataatagccagaagctggaaaaaaaaaaacagatgtctctcaattgaggaatgcctacaggaaatgtggaacatttaggtaatggagtaatatgcagctattaaaaacaaagaattcatgaaattcttaggtaaatggatggatcttcaggatatcatactgagtgagttaaccaatcacacacacacacaaaaacacatatgatatgcactcactgacaagtgcatattagctcagaaactcaaatacccaagatacaattgacaaaccacatgaaactcaagaagaaagaagaacaaagtgtggatacttctatccatcctggaagggataacaaaatatcaatggaaggaattacagaaacagtgtggagcagagactgaaggaatgaccatccagagactgccccacctggggatccatccaatatacaatcaccaatcccagactctattgcggatgccaacaagtgctctctgacaggagctagatatagttgtctcctgagaggctctgccagtgcctgacaaatacagaagtagatactcacagccatcaattggactgagcatagggtccccaatgaatgagctagtgagagtacccaaggagctaaaagtgtttgcatccccgtaagaggaacaacatttttaactaaccagagtgattatggtgagttgataaagcatatttgaaagatgtgggcacttgggcaacagtatgaaaaatagacaaaaatcagagaggctatgagggtgcctaggagtacacacaaccattggctttcattcacagataccccatctgtggagaggatgatgaggtgtctaacttagaaaaaaggccagacactggaaagaagttccaaaacataattattgcatgcagagttatggatccatttgatacaatcatataaatagaacattctgttgaaatagttaagtacctccaggaggaactaaaatgataatatgctcaaattggaattatcgttatttgtattttcttgttgattcatgattaaattaaaagaatttc
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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