2024-05-18 14:53:14, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NR_032271 75 bp RNA linear ROD 24-DEC-2023 DEFINITION Rattus norvegicus microRNA 375 (Mir375), microRNA. ACCESSION NR_032271 VERSION NR_032271.1 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 75) AUTHORS Sun X, Mi L, Du G, Sun C and He S. TITLE Platelet-rich plasma treatment alleviates osteoarthritis-related pain, inflammation, and apoptosis by upregulating the expression levels of microRNA-375 and microRNA-337 JOURNAL Immunopharmacol Immunotoxicol 44 (1), 87-98 (2022) PUBMED 34845965 REMARK GeneRIF: Platelet-rich plasma treatment alleviates osteoarthritis-related pain, inflammation, and apoptosis by upregulating the expression levels of microRNA-375 and microRNA-337. REFERENCE 2 (bases 1 to 75) AUTHORS Xu L, Li G, Tang X, Feng C, Li M, Jiang X, Gu Y, Yun Y, Lu L, Feng X, Ding X and Sun B. TITLE MiR-375-3p mediates reduced pineal function in hypoxia-ischemia brain damage JOURNAL Exp Neurol 344, 113814 (2021) PUBMED 34280452 REMARK GeneRIF: MiR-375-3p mediates reduced pineal function in hypoxia-ischemia brain damage. REFERENCE 3 (bases 1 to 75) AUTHORS Han KH, Cho H, Han KR, Mun SK, Kim YK, Park I and Chang M. TITLE Role of microRNA-375-3p-mediated regulation in tinnitus development JOURNAL Int J Mol Med 48 (1) (2021) PUBMED 34036397 REMARK GeneRIF: Role of microRNA3753pmediated regulation in tinnitus development. REFERENCE 4 (bases 1 to 75) AUTHORS Gezginci-Oktayoglu S, Sancar S, Karatug-Kacar A and Bolkent S. TITLE miR-375 induces adipogenesis through targeting Erk1 in pancreatic duct cells under the influence of sodium palmitate JOURNAL J Cell Physiol 236 (5), 3881-3895 (2021) PUBMED 33107061 REMARK GeneRIF: miR-375 induces adipogenesis through targeting Erk1 in pancreatic duct cells under the influence of sodium palmitate. REFERENCE 5 (bases 1 to 75) AUTHORS Li Y, Li X, Wang L, Han N and Yin G. TITLE miR-375-3p contributes to hypoxia-induced apoptosis by targeting forkhead box P1 (FOXP1) and Bcl2 like protein 2 (Bcl2l2) in rat cardiomyocyte h9c2 cells JOURNAL Biotechnol Lett 43 (2), 353-367 (2021) PUBMED 33128129 REMARK GeneRIF: miR-375-3p contributes to hypoxia-induced apoptosis by targeting forkhead box P1 (FOXP1) and Bcl2 like protein 2 (Bcl2l2) in rat cardiomyocyte h9c2 cells. REFERENCE 6 (bases 1 to 75) AUTHORS Linsen SE, de Wit E, de Bruijn E and Cuppen E. TITLE Small RNA expression and strain specificity in the rat JOURNAL BMC Genomics 11, 249 (2010) PUBMED 20403161 REMARK Publication Status: Online-Only REFERENCE 7 (bases 1 to 75) AUTHORS Bravo-Egana V, Rosero S, Molano RD, Pileggi A, Ricordi C, Dominguez-Bendala J and Pastori RL. TITLE Quantitative differential expression analysis reveals miR-7 as major islet microRNA JOURNAL Biochem Biophys Res Commun 366 (4), 922-926 (2008) PUBMED 18086561 REMARK GeneRIF: miR-7 is the most abundant endocrine miRNA in islets while miR-375 is the most abundant intra-islet miRNA. REFERENCE 8 (bases 1 to 75) AUTHORS Lynn FC, Skewes-Cox P, Kosaka Y, McManus MT, Harfe BD and German MS. TITLE MicroRNA expression is required for pancreatic islet cell genesis in the mouse JOURNAL Diabetes 56 (12), 2938-2945 (2007) PUBMED 17804764 REFERENCE 9 (bases 1 to 75) AUTHORS Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M, Weir DB, Choksi R, De Vita G, Frezzetti D, Trompeter HI, Hornung V, Teng G, Hartmann G, Palkovits M, Di Lauro R, Wernet P, Macino G, Rogler CE, Nagle JW, Ju J, Papavasiliou FN, Benzing T, Lichter P, Tam W, Brownstein MJ, Bosio A, Borkhardt A, Russo JJ, Sander C, Zavolan M and Tuschl T. TITLE A mammalian microRNA expression atlas based on small RNA library sequencing JOURNAL Cell 129 (7), 1401-1414 (2007) PUBMED 17604727 REFERENCE 10 (bases 1 to 75) AUTHORS Griffiths-Jones S, Grocock RJ, van Dongen S, Bateman A and Enright AJ. TITLE miRBase: microRNA sequences, targets and gene nomenclature JOURNAL Nucleic Acids Res 34 (Database issue), D140-D144 (2006) PUBMED 16381832 COMMENT PROVISIONAL REFSEQ: This record is based on preliminary annotation provided by NCBI staff in collaboration with miRBase. The reference sequence was derived from JACYVU010000215.1. Summary: microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]. Sequence Note: This record represents a predicted microRNA stem-loop as defined by miRBase. Some sequence at the 5' and 3' ends may not be included in the intermediate precursor miRNA produced by Drosha cleavage. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-75 JACYVU010000215.1 9527602-9527676 c FEATURES Location/Qualifiers source 1..75 /organism="Rattus norvegicus" /mol_type="transcribed RNA" /strain="BN" /db_xref="taxon:10116" /chromosome="9" /map="9q33" gene 1..75 /gene="Mir375" /gene_synonym="rno-mir-375" /note="microRNA 375" /db_xref="GeneID:100314263" /db_xref="miRBase:MI0006140" /db_xref="RGD:2325360" precursor_RNA 1..75 /gene="Mir375" /gene_synonym="rno-mir-375" /product="microRNA 375" /db_xref="GeneID:100314263" /db_xref="miRBase:MI0006140" /db_xref="RGD:2325360" exon 1..75 /gene="Mir375" /gene_synonym="rno-mir-375" /inference="alignment:Splign:2.1.0" ncRNA 10..32 /ncRNA_class="miRNA" /gene="Mir375" /gene_synonym="rno-mir-375" /product="rno-miR-375-5p" /db_xref="miRBase:MIMAT0017301" /db_xref="GeneID:100314263" /db_xref="miRBase:MI0006140" /db_xref="RGD:2325360" ncRNA 45..66 /ncRNA_class="miRNA" /gene="Mir375" /gene_synonym="rno-mir-375" /product="rno-miR-375-3p" /db_xref="miRBase:MIMAT0005307" /db_xref="GeneID:100314263" /db_xref="miRBase:MI0006140" /db_xref="RGD:2325360" ORIGIN
tccggccccgcgacgagcccctcgcacaaaccggacctgagcgttttgttcgttcggctcgcgtgaggcaggggc
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@meso_cacase at
DBCLS
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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