2024-05-18 15:31:35, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NR_031552 65 bp RNA linear VRT 01-DEC-2021 DEFINITION Gallus gallus microRNA 375 (MIR375), microRNA. ACCESSION NR_031552 VERSION NR_031552.1 KEYWORDS RefSeq. SOURCE Gallus gallus (chicken) ORGANISM Gallus gallus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus. REFERENCE 1 (bases 1 to 65) AUTHORS Li H, Shang H, Shu D, Zhang H, Ji J, Sun B, Li H and Xie Q. TITLE gga-miR-375 plays a key role in tumorigenesis post subgroup J avian leukosis virus infection JOURNAL PLoS One 9 (4), e90878 (2014) PUBMED 24694742 REMARK GeneRIF: data suggests that gga-miR-375 may function as a tumour suppressor thereby regulating cancer cell proliferation and it plays a key role in avian leukosis tumorigenesis. Publication Status: Online-Only REFERENCE 2 (bases 1 to 65) AUTHORS Song J, Kim D, Chun CH and Jin EJ. TITLE MicroRNA-375, a new regulator of cadherin-7, suppresses the migration of chondrogenic progenitors JOURNAL Cell Signal 25 (3), 698-706 (2013) PUBMED 23178988 REMARK GeneRIF: MiR-375 was necessary and sufficient to down-regulate cell migration through negative regulation of cadherin-7 by the direct interaction with 3' UTR of cadherin-7. Erratum:[Cell Signal. 2020 Mar;67:109480. PMID: 31776059] REFERENCE 3 (bases 1 to 65) AUTHORS Griffiths-Jones S, Grocock RJ, van Dongen S, Bateman A and Enright AJ. TITLE miRBase: microRNA sequences, targets and gene nomenclature JOURNAL Nucleic Acids Res 34 (Database issue), D140-D144 (2006) PUBMED 16381832 COMMENT PROVISIONAL REFSEQ: This record is based on preliminary annotation provided by NCBI staff in collaboration with miRBase. The reference sequence was derived from JAENSK010000236.1. Summary: microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]. Sequence Note: This record represents a predicted microRNA stem-loop as defined by miRBase. Some sequence at the 5' and 3' ends may not be included in the intermediate precursor miRNA produced by Drosha cleavage. ##Evidence-Data-START## Transcript is intronless :: LM609609.1 [ECO:0000345] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-65 JAENSK010000236.1 14605504-14605568 FEATURES Location/Qualifiers source 1..65 /organism="Gallus gallus" /mol_type="transcribed RNA" /db_xref="taxon:9031" /chromosome="7" /map="7" gene 1..65 /gene="MIR375" /gene_synonym="gga-mir-375; mir-375; MIRN375" /note="microRNA 375" /db_xref="CGNC:59184" /db_xref="GeneID:777903" /db_xref="miRBase:MI0003705" precursor_RNA 1..65 /gene="MIR375" /gene_synonym="gga-mir-375; mir-375; MIRN375" /product="microRNA 375" /db_xref="GeneID:777903" /db_xref="CGNC:59184" /db_xref="miRBase:MI0003705" exon 1..65 /gene="MIR375" /gene_synonym="gga-mir-375; mir-375; MIRN375" /inference="alignment:Splign:2.1.0" ncRNA 41..62 /ncRNA_class="miRNA" /gene="MIR375" /gene_synonym="gga-mir-375; mir-375; MIRN375" /product="gga-miR-375" /db_xref="miRBase:MIMAT0003362" /db_xref="CGNC:59184" /db_xref="GeneID:777903" /db_xref="miRBase:MI0003705" ORIGIN
cctggcgtcgagccccacgtgcaagacctgacctgaacgttttgttcgttcggctcgcgttaggc
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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