LOCUS       NM_128783               4480 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana early endosome antigen (AT2G32240), mRNA.
ACCESSION   NM_128783
VERSION     NM_128783.5
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 4480)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 4480)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 4480)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 4480)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003071).
            
            On Jun 19, 2009 this sequence version replaced NM_128783.4.
FEATURES             Location/Qualifiers
     source          1..4480
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     gene            1..4480
                     /locus_tag="AT2G32240"
                     /gene_synonym="F22D22.1; F22D22_1"
                     /db_xref="Araport:AT2G32240"
                     /db_xref="GeneID:817784"
                     /db_xref="TAIR:AT2G32240"
     CDS             164..4165
                     /locus_tag="AT2G32240"
                     /gene_synonym="F22D22.1; F22D22_1"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EH852442.1,INSD:BP809116.1,INSD:ES025317.1,
                     INSD:CD534513.1,INSD:BP621835.1,INSD:EL090901.1,
                     INSD:ES062676.1,INSD:AV545885.1,INSD:EL341238.1,
                     INSD:CF774036.1,INSD:EL328862.1,INSD:EH956110.1,
                     INSD:AV806979.1,INSD:BX839802.1,INSD:AV530154.1,
                     INSD:EL301270.1,INSD:ES068454.1,INSD:AV524066.1,
                     INSD:BP614052.1,INSD:DR360471.1,INSD:CD534460.1,
                     INSD:R30330.1,INSD:AV806610.1,INSD:ES107423.1,
                     INSD:EH986910.1,INSD:BU635663.1,INSD:EG520962.1,
                     INSD:BP615095.1,INSD:BP604038.1,INSD:EL229137.1,
                     INSD:AV816620.1,INSD:EH890295.1,INSD:EL222763.1,
                     INSD:EL331427.1,INSD:EH959808.1,INSD:EG520961.1,
                     INSD:AV790321.1,INSD:EL189742.1,INSD:ES105313.1,
                     INSD:EL273712.1,INSD:AV545801.1,INSD:EG430278.1,
                     INSD:AV545911.1,INSD:EG520963.1,INSD:EL277958.1,
                     INSD:CD534661.1,INSD:AI996654.1,INSD:EL301576.1,
                     INSD:ES062557.1,INSD:EL091331.1,INSD:AV554916.1,
                     INSD:AV796895.1,INSD:EL015940.1,INSD:EL131657.1,
                     INSD:CD529316.1,INSD:AV826967.1,INSD:BP575184.1,
                     INSD:EH800442.1,INSD:EL077870.1,INSD:BX835795.1,
                     INSD:CD530768.1,INSD:AV783868.1,INSD:EL236805.1,
                     INSD:EL126175.1,INSD:EH819804.1,INSD:EG430281.1,
                     INSD:EG430286.1,INSD:AV554892.1,INSD:Z33836.1,
                     INSD:EG430280.1,INSD:EL235290.1,INSD:CD534679.1,
                     INSD:EH940199.1,INSD:AV825164.1,INSD:EL125505.1,
                     INSD:CD530500.1,INSD:EL115049.1,INSD:AV822984.1,
                     INSD:BP621668.1,INSD:AV546307.1,INSD:EH851125.1,
                     INSD:DR360470.1,INSD:EH849761.1,INSD:H76467.1,
                     INSD:EL298866.1,INSD:Z34716.1,INSD:CB258259.1,
                     INSD:AV547030.1,INSD:EL210732.1,INSD:EH882690.1,
                     INSD:BP783632.1,INSD:W43372.1,INSD:EL095204.1,
                     INSD:EL068061.1,INSD:CD532876.1,INSD:EL011242.1,
                     INSD:AV546557.1,INSD:N95876.1,INSD:BE662903.1,
                     INSD:BP806056.2,INSD:CD530051.1,INSD:EG430279.1,
                     INSD:BP617957.1,INSD:AV554779.1,INSD:EL149455.1,
                     INSD:EG430275.1,INSD:EL270552.1,INSD:EH874675.1,
                     INSD:EL217569.1,INSD:EH912112.1,INSD:ES142033.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:AY057490.1,INSD:AY093081.1,INSD:AY219117.1,
                     INSD:AY128767.1,INSD:AK226327.1,INSD:AY219116.1"
                     /note="FUNCTIONS IN: molecular_function unknown; INVOLVED
                     IN: response to cadmium ion; LOCATED IN: plasma membrane;
                     EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13
                     growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin
                     (InterPro:IPR009053); BEST Arabidopsis thaliana protein
                     match is: unknown protein (TAIR:AT1G05320.3); Has 470429
                     Blast hits to 168274 proteins in 4282 species: Archae -
                     6896; Bacteria - 131956; Metazoa - 175525; Fungi - 33166;
                     Plants - 25441; Viruses - 2243; Other Eukaryotes - 95202
                     (source: NCBI BLink)."
                     /codon_start=1
                     /product="early endosome antigen"
                     /protein_id="NP_565741.4"
                     /db_xref="Araport:AT2G32240"
                     /db_xref="GeneID:817784"
                     /db_xref="TAIR:AT2G32240"
                     /translation="

MEEATQVTSSEVPVVKGDVDDLKTADISVKAVNGEVPKEEKEEEDGEFIKVEKEAFDAKDDAEKADHVPVEEQKEVIERSSSGSQRELHESQEKAKELELELERVAGELKRYESENTHLKDELLSAKEKLEETEKKHGDLEVVQKKQQEKIVEGEERHSSQLKSLEDALQSHDAKDKELTEVKEAFDALGIELESSRKKLIELEEGLKRSAEEAQKFEELHKQSASHADSESQKALEFSELLKSTKESAKEMEEKMASLQQEIKELNEKMSENEKVEAALKSSAGELAAVQEELALSKSRLLETEQKVSSTEALIDELTQELEQKKASESRFKEELSVLQDLDAQTKGLQAKLSEQEGINSKLAEELKEKELLESLSKDQEEKLRTANEKLAEVLKEKEALEANVAEVTSNVATVTEVCNELEEKLKTSDENFSKTDALLSQALSNNSELEQKLKSLEELHSEAGSAAAAATQKNLELEDVVRSSSQAAEEAKSQIKELETKFTAAEQKNAELEQQLNLLQLKSSDAERELKELSEKSSELQTAIEVAEEEKKQATTQMQEYKQKASELELSLTQSSARNSELEEDLRIALQKGAEHEDRANTTHQRSIELEGLCQSSQSKHEDAEGRLKDLELLLQTEKYRIQELEEQVSSLEKKHGETEADSKGYLGQVAELQSTLEAFQVKSSSLEAALNIATENEKELTENLNAVTSEKKKLEATVDEYSVKISESENLLESIRNELNVTQGKLESIENDLKAAGLQESEVMEKLKSAEESLEQKGREIDEATTKRMELEALHQSLSIDSEHRLQKAMEEFTSRDSEASSLTEKLRDLEGKIKSYEEQLAEASGKSSSLKEKLEQTLGRLAAAESVNEKLKQEFDQAQEKSLQSSSESELLAETNNQLKIKIQELEGLIGSGSVEKETALKRLEEAIERFNQKETESSDLVEKLKTHENQIEEYKKLAHEASGVADTRKVELEDALSKLKNLESTIEELGAKCQGLEKESGDLAEVNLKLNLELANHGSEANELQTKLSALEAEKEQTANELEASKTTIEDLTKQLTSEGEKLQSQISSHTEENNQVNAMFQSTKEELQSVIAKLEEQLTVESSKADTLVSEIEKLRAVAAEKSVLESHFEELEKTLSEVKAQLKENVENAATASVKVAELTSKLQEHEHIAGERDVLNEQVLQLQKELQAAQSSIDEQKQAHSQKQSELESALKKSQEEIEAKKKAVTEFESMVKDLEQKVQLADAKTKETEAMDVGVKSRDIDLSFSSPTKRKSKKKPEASLSSSSSSGNVTTPTQTASTSHLMTVKIVTGVALISVIIGIILGRKY"

     misc_feature    <374..2677
                     /locus_tag="AT2G32240"
                     /gene_synonym="F22D22.1; F22D22_1"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; Region: SMC_prok_B; TIGR02168"
                     /db_xref="CDD:274008"
     misc_feature    1634..3901
                     /locus_tag="AT2G32240"
                     /gene_synonym="F22D22.1; F22D22_1"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; Region: SMC_prok_B; TIGR02168"
                     /db_xref="CDD:274008"
ORIGIN      

ctctcacacacacccaatttgcatttctttcgtcatcatcatctactctttctgcgtttttcccagctgaataatctaaacaaggaaaagtaaaacagagtaccaatctcagattcatcagctccacttgaatttaaagtagccataactgttcgatcataggatggaagaagcaactcaagtaacgagttctgaggtccctgtagtgaaaggtgatgttgatgaccttaagacagctgatatttccgtcaaggctgtgaatggagaagtgccaaaggaggagaaagaagaggaagatggggaattcataaaagttgagaaggaagcttttgatgccaaggatgatgcggagaaagcagatcatgttcctgttgaagagcaaaaggaagttattgaaagaagctcgagtggttcacagagagaactacatgaatcacaagaaaaggcaaaagaactagagctcgaattggaaagagttgcaggggaactaaaacggtatgaatctgaaaatacccatttgaaggatgagcttttgtctgcgaaagagaagttagaagaaacggaaaagaagcatggagatcttgaagttgtccaaaagaagcagcaagagaaaattgttgaaggggaagagagacacagctcacagttaaagtccttggaagatgctttgcagtcacatgatgcgaaagataaggaactaactgaagttaaggaagcttttgatgcgttgggcatagaactcgagagctcacgaaagaagttgatagagttggaggaggggctaaaacgttcagctgaagaggctcagaaatttgaagagctgcataagcaaagtgcttctcatgctgactctgagtcgcagaaggctttggaattttcggagctgcttaaatcgacaaaagagagtgccaaggaaatggaggaaaaaatggcgtccctgcaacaagaaatcaaggagctcaatgagaagatgtctgaaaacgaaaaggttgaagctgccttaaagagtagtgcgggagaattagctgcagtgcaagaggaattggcactttcaaaatctcgtttgttagagacggaacaaaaagtgtcttccacagaagccctcattgatgaactgactcaggaacttgagcagaagaaagcttccgaatctcggttcaaggaagagttatccgttctccaagatttggatgctcagaccaaaggtcttcaggctaaactttctgaacaggaaggtattaattcaaagcttgcggaagaactcaaggagaaggaacttctggaatccttatcaaaagaccaagaagagaagctgagaactgcaaatgagaagttggctgaagttttgaaagaaaaagaagcgcttgaagcaaatgtagcagaggtcacaagtaatgtagcaacagtaacagaggtctgcaatgaactagaagagaaactgaagacctcagatgagaatttctccaaaacagatgctcttctttctcaagctttgtcaaacaactctgagcttgaacagaaactgaaatcgctggaggagcttcattctgaagctggatctgcagcagcagctgctacccagaagaaccttgagctagaggatgttgttcggtcctctagtcaagcagcagaagaagccaaatcacagataaaagagctggagacaaagttcactgcagctgaacaaaagaacgcggagcttgagcagcaactgaatttattgcagctgaaaagtagtgatgcagaacgcgagttgaaggaactctccgagaaatcatctgaactacaaactgctattgaagttgccgaagaagagaaaaaacaggcgaccactcagatgcaggaatacaaacaaaaagcatcagaattggaattgtctctgacccaatcatcggccagaaattcagagcttgaagaagatttgagaatcgctttgcagaagggtgcagaacatgaagaccgagctaatacaactcaccagcgcagtattgaactagaaggtctttgtcaatcatcacagtcaaaacatgaagacgcagaaggaagattaaaagacttggagcttctactccagacagaaaagtacagaattcaggaacttgaggagcaggttagctcgctagaaaagaagcatggggaaactgaagcagattctaaaggttacttgggtcaggtggctgagcttcaatccacactagaggcatttcaagtgaaaagttcaagcctcgaagctgctttaaacatcgcaactgaaaacgagaaagaactgacagaaaatctgaacgctgtgacgagtgagaaaaagaaattagaggcaacagtggatgagtacagcgtgaagatcagtgagtctgagaatctgttagaaagtatcaggaatgaattgaatgtcacacaaggaaagttggagagtattgaaaatgatctgaaagctgctggcttacaggaaagtgaagtaatggagaaactgaagtctgctgaagagagtcttgagcagaaaggaagagaaatagatgaagctactacgaaacgtatggagcttgaagctttgcatcagtctttaagtatagactcagagcatagacttcaaaaggcaatggaggagttcactagcagagattcagaggccagttctttgactgagaagttgagagacttggaaggcaaaataaaatcatatgaagagcagttggctgaagcatctggcaaatcttcttctttgaaagaaaaacttgaacagactttgggaaggcttgcagctgcagaatctgttaatgaaaaactcaaacaagagtttgatcaggcacaagaaaaatctttgcaatcatcatcagagagtgaactactagcagagacaaacaaccaactcaagatcaaaattcaagagcttgaggggttaataggttctggttctgtcgagaaagaaactgcattgaaaaggttagaagaggcaatcgaaaggtttaatcagaaagaaacagaatctagtgacttggttgaaaagttaaaaacacatgaaaaccaaatcgaggagtacaaaaagctggctcatgaagcatcaggagttgcggacactagaaaagttgagcttgaagacgcgctatcaaagttgaagaatcttgaatctactattgaagagctcggggccaaatgccaggggcttgagaaagaaagtggggatttggccgaggtgaatttgaagttgaatctggaactagccaatcatggatctgaggccaacgagttgcagacaaagctctctgccttggaggccgagaaggagcaaacagccaatgagcttgaggcttcaaagacaaccatagaagatctaacaaagcagcttacctctgaaggggagaaattacagtcacagatttcttcccacactgaggagaacaaccaagtcaatgcgatgtttcagagtaccaaggaggagctgcaatcagttattgccaagcttgaagaacaactaaccgtagagagctctaaagctgatactctggtctccgagattgagaagctcagggcagtggctgctgaaaagtccgttctggaatcacattttgaagaacttgaaaaaactttgtcagaggtcaaagctcagttgaaagaaaatgtggaaaatgcagctactgcgtctgtaaaagtggcggaattgacctcaaaactgcaggaacacgaacatattgctggtgaacgagatgtgctcaacgagcaagtgcttcagcttcagaaagagcttcaagcggctcagagttccattgatgaacagaaacaagcacactcccagaagcaatcagagctggagtctgcattaaagaaatcacaagaagagattgaagctaagaaaaaggctgtcactgaatttgaatcaatggtcaaagatcttgaacagaaagtgcagctcgcagatgctaaaactaaggaaacggaggcaatggatgtaggtgtcaaatctcgagacattgacttatccttttcttctccaacgaaacgtaagagcaagaagaagccagaagcatctctttcttcttcttcgtcttcgggcaatgttactactcctactcaaacagcatcaacttcacatctcatgacagtgaagatcgtcactggagtggcgctgatctctgttatcatcggtataattcttgggagaaagtattagtctcgtcttctcagtgtggcttgatgatgttcatatctgaaatgaagatctctccttcttcatttgttttttttgggggtttttgaattttgatagcagaactaagaagctttgcgtgaatatgcttctctctctgctaatatttgcttgtggttgggttttgttttaccgggtctgggagattttgttgtaccagcccttgcttgtaggtcaagcaattgtccagatattgtattaaattaaatcaaaggtgaattaatttgataattatccaactaaaccagttggttaacaataaacccggttcaatcgacc

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