LOCUS       NM_127392               1065 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana homeobox protein 24 (HB24), mRNA.
ACCESSION   NM_127392
VERSION     NM_127392.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 1065)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 1065)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1065)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 1065)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003071).
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     gene            1..1065
                     /gene="HB24"
                     /locus_tag="AT2G18350"
                     /gene_synonym="AtHB24; homeobox protein 24; T30D6.14;
                     T30D6_14; ZHD6; ZINC FINGER HOMEODOMAIN 6"
                     /db_xref="Araport:AT2G18350"
                     /db_xref="GeneID:816350"
                     /db_xref="TAIR:AT2G18350"
     CDS             172..960
                     /gene="HB24"
                     /locus_tag="AT2G18350"
                     /gene_synonym="AtHB24; homeobox protein 24; T30D6.14;
                     T30D6_14; ZHD6; ZINC FINGER HOMEODOMAIN 6"
                     /inference="Similar to RNA sequence,
                     EST:INSD:ES194583.1,INSD:EG516461.1,INSD:DR268746.1,
                     INSD:ES199457.1,INSD:EG516470.1,INSD:AV542965.1,
                     INSD:DR370773.1,INSD:Z35740.1,INSD:ES175740.1,
                     INSD:ES120557.1,INSD:EG516469.1,INSD:EL130148.1,
                     INSD:BU636058.1,INSD:AA597670.1,INSD:EG516460.1,
                     INSD:CB256827.1,INSD:ES117665.1,INSD:ES195904.1,
                     INSD:ES115719.1"
                     /inference="similar to RNA sequence, mRNA:INSD:AY088255.1"
                     /note="homeobox protein 24 (HB24); FUNCTIONS IN: DNA
                     binding, sequence-specific DNA binding transcription
                     factor activity; INVOLVED IN: regulation of transcription;
                     LOCATED IN: cellular_component unknown; EXPRESSED IN: 19
                     plant structures; EXPRESSED DURING: 12 growth stages;
                     CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class
                     (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich
                     dimerisation domain (InterPro:IPR006456),
                     Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis
                     thaliana protein match is: homeobox protein 28
                     (TAIR:AT3G50890.1); Has 497 Blast hits to 465 proteins in
                     33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
                     0; Plants - 497; Viruses - 0; Other Eukaryotes - 0
                     (source: NCBI BLink)."
                     /codon_start=1
                     /product="homeobox protein 24"
                     /protein_id="NP_565436.1"
                     /db_xref="Araport:AT2G18350"
                     /db_xref="GeneID:816350"
                     /db_xref="TAIR:AT2G18350"
                     /translation="

MEVREKKDEKMEMTRRKSSALDHHRLPPYTYSQTANKEKPTTKRNGSDPDPDPDLDTNPISISHAPRSYARPQTTSPGKARYRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCHRSFHRKEIDGLFVVNFNSFGHSQRPLGSRHVSPIMMSFGGGGGCAAESSTEDLNKFHQSFSGYGVDQFHHYQPKKRFRTKFNEEQKEKMMEFAEKIGWRMTKLEDDEVNRFCREIKVKRQVFKVWMHNNKQAAKKKDL"

     misc_feature    412..570
                     /gene="HB24"
                     /locus_tag="AT2G18350"
                     /gene_synonym="AtHB24; homeobox protein 24; T30D6.14;
                     T30D6_14; ZHD6; ZINC FINGER HOMEODOMAIN 6"
                     /note="ZF-HD protein dimerization region; Region:
                     ZF-HD_dimer; pfam04770"
                     /db_xref="CDD:398439"
     misc_feature    763..936
                     /gene="HB24"
                     /locus_tag="AT2G18350"
                     /gene_synonym="AtHB24; homeobox protein 24; T30D6.14;
                     T30D6_14; ZHD6; ZINC FINGER HOMEODOMAIN 6"
                     /note="homeobox domain, ZF-HD class; Region: homeo_ZF_HD;
                     TIGR01565"
                     /db_xref="CDD:130628"
ORIGIN      

atcatcttcattttctctataggtttatgagaagctaaagctatgatgatttctttaatcaaaatagcttagggttttggagagagattactaagaaagttttaatgtttgtttaagagaaaagttatatattagggttttctttattcagaagcttcaagatcagaaaagatggaagttagagagaagaaagatgagaaaatggagatgacaagaagaaaatcatcagctctagatcatcatcgtcttcctccgtacacttactcccaaaccgccaacaaagagaaacccaccaccaaaagaaacgggtcggacccggatccggatccggatcttgatactaacccaatttctatatctcatgctccaagatcatacgctaggcctcaaactacttctccggggaaggcaaggtatagagaatgccaaaagaatcacgcggcgagctccggtggacacgttgtcgacggttgcggcgagtttatgtcttccggggaagaaggcacggtggagtctcttctttgtgcagcttgtgattgccaccggagcttccatagaaaagagatcgatggtttgtttgttgtcaatttcaatagctttggccattcacagagaccactcggaagccgccacgtgtctccgataatgatgagttttggtggtggtggtggttgtgcggcggagtcatcgacggaggatctaaacaagtttcatcaatcttttagtggttatggagtggatcagtttcatcattatcaacccaagaaacggtttaggacaaagtttaatgaagaacagaaggagaagatgatggagtttgctgagaagattggttggagaatgacaaaactagaagatgatgaagtgaatcggttttgtcgtgagattaaagttaaaagacaagtgtttaaagtttggatgcacaacaataaacaagcagcaaagaagaaggatttgtaagagatttctatatatatatatatactatttttacttctctttgttcaacattgctttaacttaaagactttgtgtttattgtataacaaattgattttagagctc

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