LOCUS       NM_118599               1284 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana homeobox protein 22 (HB22), mRNA.
ACCESSION   NM_118599
VERSION     NM_118599.2
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 1284)
  AUTHORS   Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
            Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
            Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
            Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
            Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
            Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
            Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
            Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
            Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
            Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
            Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
            Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
            Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
            Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
            Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
            Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
            Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
            Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
            Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
            Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
            Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
            Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
            Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
            Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
            Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
            Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
            Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
            Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
            Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
            Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
            Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
            Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
            Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
            Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
            Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
            Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
            Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
            Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
            Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
            Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
            Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
            Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
            Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
            Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
            Martienssen,R. and McCombie,W.R.
  TITLE     Sequence and analysis of chromosome 4 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 769-777 (1999)
   PUBMED   10617198
REFERENCE   2  (bases 1 to 1284)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1284)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 1284)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003075).
            
            On Sep 12, 2016 this sequence version replaced NM_118599.1.
FEATURES             Location/Qualifiers
     source          1..1284
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="4"
                     /ecotype="Columbia"
     gene            1..1284
                     /gene="HB22"
                     /locus_tag="AT4G24660"
                     /gene_synonym="ATHB22; F22K18.140; F22K18_140; homeobox
                     protein 22; HOMEOBOX PROTEIN 22; MATERNAL EFFECT EMBRYO
                     ARREST 68; MEE68; ZHD2; ZINC FINGER HOMEODOMAIN 2"
                     /db_xref="Araport:AT4G24660"
                     /db_xref="GeneID:828568"
                     /db_xref="TAIR:AT4G24660"
     CDS             323..985
                     /gene="HB22"
                     /locus_tag="AT4G24660"
                     /gene_synonym="ATHB22; F22K18.140; F22K18_140; homeobox
                     protein 22; HOMEOBOX PROTEIN 22; MATERNAL EFFECT EMBRYO
                     ARREST 68; MEE68; ZHD2; ZINC FINGER HOMEODOMAIN 2"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EH808670.1,INSD:BP631260.1,INSD:AV815068.1,
                     INSD:EL200327.1,INSD:EH966750.1,INSD:BP815145.1,
                     INSD:EH815872.1,INSD:EH879896.1,INSD:DR261783.1,
                     INSD:AI996108.1,INSD:EH991076.1,INSD:EH992952.1,
                     INSD:ES149247.1,INSD:EL111462.1,INSD:EH861936.1,
                     INSD:DR261782.1,INSD:AV831142.1,INSD:BP631111.1,
                     INSD:EL092286.1,INSD:BP632661.1,INSD:Z25614.1,
                     INSD:BP818692.1,INSD:EH946790.1"
                     /inference="Similar to RNA sequence,
                     mRNA:INSD:AF439841.1,INSD:AY125563.1"
                     /note="homeobox protein 22 (HB22); CONTAINS InterPro
                     DOMAIN/s: Homeobox domain, ZF-HD class
                     (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich
                     dimerisation domain (InterPro:IPR006456),
                     Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis
                     thaliana protein match is: homeobox protein 25
                     (TAIR:AT5G65410.1); Has 493 Blast hits to 471 proteins in
                     34 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi -
                     0; Plants - 490; Viruses - 0; Other Eukaryotes - 0
                     (source: NCBI BLink)."
                     /codon_start=1
                     /product="homeobox protein 22"
                     /protein_id="NP_194197.1"
                     /db_xref="GeneID:828568"
                     /db_xref="TAIR:AT4G24660"
                     /db_xref="Araport:AT4G24660"
                     /translation="

MNFEDQEEDMEMSGVNPPCGYDSLSGEGATSSGGGGVGRSKGVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESIGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHNNKNSLGKKP"

     misc_feature    458..622
                     /gene="HB22"
                     /locus_tag="AT4G24660"
                     /gene_synonym="ATHB22; F22K18.140; F22K18_140; homeobox
                     protein 22; HOMEOBOX PROTEIN 22; MATERNAL EFFECT EMBRYO
                     ARREST 68; MEE68; ZHD2; ZINC FINGER HOMEODOMAIN 2"
                     /note="ZF-HD protein dimerization region; Region:
                     ZF-HD_dimer; pfam04770"
                     /db_xref="CDD:398439"
     misc_feature    794..961
                     /gene="HB22"
                     /locus_tag="AT4G24660"
                     /gene_synonym="ATHB22; F22K18.140; F22K18_140; homeobox
                     protein 22; HOMEOBOX PROTEIN 22; MATERNAL EFFECT EMBRYO
                     ARREST 68; MEE68; ZHD2; ZINC FINGER HOMEODOMAIN 2"
                     /note="homeobox domain, ZF-HD class; Region: homeo_ZF_HD;
                     TIGR01565"
                     /db_xref="CDD:130628"
ORIGIN      

tgggtgttctttttggatgaaactatctatatatgaatattattctaaaacaaacaaaaaaaaacgtaaaaagttgagactcccttttattaagcggcagggtttgttgaccacactctcatcatctatctctttcttatcttcactgttttatcttttctttcggattaaattaaataattttttcctccataatttatactcttaactctcatgaattattggtctctctattatagttttttaagtaacaatctaattgtagtacggatgtctcttgagatgttcaagaattaagaaataaagaaagagggatcggagaatgaattttgaggatcaagaagaagatatggagatgtcaggtgttaatcccccctgcggttacgactctctaagcggtgagggagccacatctagtggtggtggaggagtaggaaggagtaaaggagttggagcgaagataaggtatagagagtgcttgaagaaccatgctgttaacataggtggccacgccgtggacggttgttgcgagtttatgccttccggtgaagatggaacgctcgacgctcttaagtgtgcagcttgcggctgccaccgcaacttccaccgcaaggaaaccgaaagcatcggcggtagagcccacagagttcccacgtactacaaccgcccgccgcagccgcatcagccgcctggatatcttcatctaacatctcccgcggcgccttacaggccacccgcggcatcgggggacgaggaggatacatcaaatcctagcagcagcggcgggaccacgaagaggtttagaacgaagttcacggcggaacagaaagagaagatgttagcctttgcggagaggttggggtggagaattcagaagcatgatgacgtggcggttgagcagttctgtgcggagactggtgttaggagacaagtgcttaaaatctggatgcataacaacaagaactctcttggtaagaaaccctaattttgctcgagacatgatttaaaacactagaggatcataattgtttctttttttggtatgactcttctgtaactacttctgcttattagttatgttattttttcctggacatacagtttcttcttctagttaataatcgtatctggtcgtttcggacagtttaggagacattgtgattaatctttattaactttggttcgactagttaattccataaatttactgaggatgcaattgaatgatgaaccaaactatccaaatttaaagtacagtgattaaaccaacattggtaaacaata

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