LOCUS       NM_111259               1178 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana sterol O-acyltransferase, putative (DUF1639)
            (AT3G03880), mRNA.
ACCESSION   NM_111259
VERSION     NM_111259.4
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (bases 1 to 1178)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1178)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 1178)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003074).
            
            On Sep 12, 2016 this sequence version replaced NM_111259.3.
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     gene            1..1178
                     /locus_tag="AT3G03880"
                     /gene_synonym="F20H23.7; F20H23_7"
                     /db_xref="Araport:AT3G03880"
                     /db_xref="GeneID:821095"
                     /db_xref="TAIR:AT3G03880"
     CDS             267..848
                     /locus_tag="AT3G03880"
                     /gene_synonym="F20H23.7; F20H23_7"
                     /inference="Similar to RNA sequence,
                     EST:INSD:AV553223.1,INSD:EL059178.1,INSD:EL312559.1,
                     INSD:BP609492.1,INSD:EH937260.1,INSD:AU227167.1,
                     INSD:BP867342.1,INSD:EL096242.1,INSD:DR355271.1,
                     INSD:ES104540.1,INSD:AV544737.1,INSD:EG436795.1,
                     INSD:EL314949.1,INSD:EG436784.1,INSD:AU236288.1,
                     INSD:CA781280.1,INSD:BP604173.1,INSD:EL984528.1,
                     INSD:BP577752.1,INSD:BP628832.1,INSD:ES114682.1,
                     INSD:DR276838.1,INSD:BP858540.1,INSD:EL975908.1"
                     /inference="Similar to RNA sequence,
                     mRNA:INSD:BT004399.1,INSD:BX823478.1,INSD:BT002888.1"
                     /note="Protein of unknown function (DUF1639); FUNCTIONS
                     IN: molecular_function unknown; INVOLVED IN:
                     biological_process unknown; LOCATED IN: chloroplast;
                     EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 9
                     growth stages; CONTAINS InterPro DOMAIN/s: Protein of
                     unknown function DUF1639 (InterPro:IPR012438); BEST
                     Arabidopsis thaliana protein match is: Protein of unknown
                     function (DUF1639) (TAIR:AT1G55340.2); Has 237 Blast hits
                     to 237 proteins in 15 species: Archae - 0; Bacteria - 0;
                     Metazoa - 0; Fungi - 0; Plants - 237; Viruses - 0; Other
                     Eukaryotes - 0 (source: NCBI BLink)."
                     /codon_start=1
                     /product="sterol O-acyltransferase, putative (DUF1639)"
                     /protein_id="NP_187038.2"
                     /db_xref="GeneID:821095"
                     /db_xref="TAIR:AT3G03880"
                     /db_xref="Araport:AT3G03880"
                     /translation="

MSSSLEQEIFLQWGNKKRLRCLRAKAKKISRSKNSSRFLGQDTVLLQSSRFSRGSEGAILRSGLPDRRRPSPEKEERYYTTRGVVDNIGKDCLDGNINGEDSNNKEESMWPKLFITLSNKEKEEDFMAMKGCKPSHRPKKRAKLIQRSLLLVSPGTWLADLCPDRYDVRVKKSSKKRRARGLKAMGNMETDSD"

     misc_feature    615..764
                     /locus_tag="AT3G03880"
                     /gene_synonym="F20H23.7; F20H23_7"
                     /note="Protein of unknown function (DUF1639); Region:
                     DUF1639; pfam07797"
                     /db_xref="CDD:400240"
ORIGIN      

acggttagtaaagaacccaaagagatgccctaaaggcatataaaccacctttacctcccattttacagagtcggtagatagagagaaagacgcttctggtcagttttcgttaaacccgccggagaaactagcgactacggtggtcgaacccgtctgacgtcgtagaattcatcgtaatcttcacttcctttcttccccgacaaaatcatcgatctgtgtttgccaatcagattcaccggaacttctagttaggacgattgtgaaaaatgtcgtcatcgttagaacaagaaatcttcttacagtggggaaacaagaagagattgagatgtcttagagccaaagccaaaaagatctctcgttctaaaaactcttctcgctttctaggtcaagataccgtcctccttcaatcctctagattctccagaggatcagaaggagcaatcctcagatctggactaccagatcgccggagaccgtctccggagaaagaggagaggtattatactacgagaggtgtagtggataacattgggaaagattgtttagatggaaacatcaatggagaagatagcaacaacaaggaagagagtatgtggcctaagctctttataacattatcaaacaaagagaaagaagaagatttcatggctatgaaaggttgcaaaccttctcataggcctaagaagagagctaaactcatccaaagaagcttacttttggtgagtcctggaacatggttggctgatttgtgccctgatagatacgatgttagggtgaagaagagctctaagaagaggcgagcaagagggctaaaagccatgggaaacatggagactgattcagattgacaagttttaagattagtttactagaaatgtttgcgtattgatttaagctaactttcgtgggtttccttaagcaatctttaagaatgtattttagatgaaattattcggttgagcactttgaacacaaggatatatcatttctttgtgacaatgtatgtacctgttgtaacttgtaaccctatcctaatctattgtttcagataatgtactttagtcctatttggcggcacttaatcatgggctcaagtgtaaccaattattgtatgacatatactatcttcattttctttgtgatggaacaatgacaaatctgttacaaaatgcgtttga

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