LOCUS       NM_071971               2653 bp    mRNA    linear   INV 16-MAY-2025
DEFINITION  Caenorhabditis elegans Systemic RNA interference defective protein
            1 (sid-1), mRNA.
ACCESSION   NM_071971
VERSION     NM_071971.10
DBLINK      BioProject: PRJNA158
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 2653)
  AUTHORS   Sulson,J.E. and Waterston,R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282 (5396), 2012-2018 (1998)
   PUBMED   9851916
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE   2  (bases 1 to 2653)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAY-2025) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 2653)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAY-2025) WormBase Group, European Bioinformatics
            Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE   4  (bases 1 to 2653)
  AUTHORS   Sulson,J.E. and Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
            Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
            at Washington University, St. Louis, MO 63110, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by WormBase. This
            record is derived from an annotated genomic sequence (NC_003283).
            
            On Feb 2, 2021 this sequence version replaced NM_071971.9.
FEATURES             Location/Qualifiers
     source          1..2653
                     /organism="Caenorhabditis elegans"
                     /mol_type="mRNA"
                     /strain="Bristol N2"
                     /db_xref="taxon:6239"
                     /chromosome="V"
     gene            1..2653
                     /gene="sid-1"
                     /locus_tag="CELE_C04F5.1"
                     /db_xref="GeneID:178900"
                     /db_xref="WormBase:WBGene00004795"
     CDS             8..2338
                     /gene="sid-1"
                     /locus_tag="CELE_C04F5.1"
                     /standard_name="C04F5.1"
                     /note="Confirmed by transcript evidence"
                     /codon_start=1
                     /product="Systemic RNA interference defective protein 1"
                     /protein_id="NP_504372.2"
                     /db_xref="GeneID:178900"
                     /db_xref="WormBase:WBGene00004795"
                     /translation="

MIRVYLIILMHLVIGLTQNNSTTPSPIITSSNSSVLVFEISSKMKMIEKKLEANTVHVLRLELDQSFILDLTKVAAEIVDSSKYSKEDGVILEVTVSNGRDSFLLKLPTVYPNLKLYTDGKLLNPLVEQDFGAHRKRHRIGDPHFHQNLIVTVQSRLNADIDYRLHVTHLDRAQYDFLKFKTGQTTKTLSNQKLTFVKPIGFFLNCSEQNISQFHVTLYSEDDICANLITVPANESIYDRSVISDKTHNRRVLSFTKRADIFFTETEISMFKSFRIFVFIAPDDSGCSTNTSRKSFNEKKKISFEFKKLENQSYAVPTALMMIFLTTPCLLFLPIVINIIKNSRKLAPSQSNLISFSPVPSEQRDMDLSHDEQQNTSSELENNGEIPAAENQIVEEITAENQETSVEEGNREIQVKIPLKQDSLSLHGQMLQYPVAIILPVLMHTAIEFHKWTTSTMANRDEMCFHNHACARPLGELRAWNNIITNIGYTLYGAIFIVLSICRRGRHEYSHVFGTYECTLLDVTIGVFMVLQSIASATYHICPSDVAFQFDTPCIQVICGLLMVRQWFVRHESPSPAYTNILLVGVVSLNFLISAFSKTSYVRFIIAVIHVIVVGSICLAKERSLGSEKLKTRFFIMAFSMGNFAAIVMYLTLSAFHLNQIATYCFIINCIMYLMYYGCMKVLHSERITSKAKLCGALSLLAWAVAGFFFFQDDTDWTRSAAASRALNKPCLLLGFFGSHDLWHIFGALAGLFTFIFVSFVDDDLINTRKTSINIF"

     misc_feature    596..2335
                     /gene="sid-1"
                     /locus_tag="CELE_C04F5.1"
                     /note="dsRNA-gated channel SID-1; Region: SID-1_RNA_chan;
                     pfam13965"
                     /db_xref="CDD:464057"
ORIGIN      

gttcacaatgattcgtgtttatttgataattttaatgcatttggtgattggtttaacccagaacaattcaactacaccttcgccaattatcacctcaagtaacagctctgtacttgtattcgagatttcttcaaaaatgaaaatgatcgaaaaaaagctggaagccaacacagtccatgtccttcgcctggaattagatcaaagtttcatattagatttaaccaaagtcgccgcggaaatcgttgattcttcgaaatacagtaaagaagacggtgttatactcgaagtaacagtttcaaatggccgtgatagttttttattgaaacttccgacggtttatccgaacttgaagctctatactgacggaaaactgctcaatccgctcgttgagcaagatttcggggcgcacagaaagaggcacaggataggcgaccctcatttccatcaaaacctgatcgtaaccgtgcagtctcgattgaatgctgatatagattataggcttcatgtgactcatttggatcgggcccaatatgattttctgaagttcaagacgggacagaccacgaaaacgttgtcgaatcagaagctgacgtttgtcaagccgattggattttttttgaattgcagcgaacaaaatatttcccaattccacgtcacattgtacagtgaagatgatatttgtgcaaatctgataactgtgccggcgaatgaatccatctatgatcgatcagtgatttccgataaaactcacaatcgacgtgtcctatcattcaccaaaagagccgacatttttttcactgaaactgaaatctcgatgttcaaatcattccgaatcttcgtcttcatagctcccgatgattctggatgttctaccaacacatcacgcaaaagtttcaacgagaaaaagaaaatatcttttgaattcaaaaaactggaaaatcaatcatacgccgtcccgacggctttgatgatgatatttctgacgacaccgtgtcttttgttccttccaattgtgattaatattatcaagaatagcagaaaattggcaccatcacaatcaaatcttatctcattttctccagttccgtctgagcaacgggacatggatttgagccatgatgagcagcagaatacgagctcagaactcgaaaataatggagaaattccagcagcagaaaatcaaattgttgaagagatcacggctgaaaatcaagaaacgagcgtagaagagggaaaccgggaaattcaagttaaaattccgttgaaacaggattcattatcactccatggccaaatgcttcaatatcccgttgcaataattctcccagttctcatgcacacagctatcgaattccataaatggacgacatctacaatggcaaatcgcgacgaaatgtgcttccacaatcatgcgtgtgctcggccattgggagaacttcgagcttggaataatatcatcaccaatataggatatactctttatggagccatcttcattgttttgtcgatatgtagaagaggccgtcatgagtattctcatgtttttggtacatatgaatgcacacttttagatgtgactattggtgttttcatggttttgcaatcaattgctagtgccacttatcatatttgccccagtgatgtggcttttcagtttgatacgccgtgcatccaagttatctgtggacttctcatggtccgtcagtggtttgttcgtcacgaatctccatcaccagcctatacaaatatcctactagttggagttgtctccttgaactttctaatatctgcattctccaaaacatcatatgtccgattcatcatcgctgtaattcatgtcattgtcgttggatcgatctgtttggcaaaggaaagatccttgggatcggaaaaattaaaaactcgatttttcatcatggccttctcgatgggaaatttcgcagcaatcgtgatgtatctgacgctttcggcgtttcatttgaatcaaatagccacgtattgctttattataaattgtatcatgtatctgatgtactatggatgcatgaaagttttacatagcgagagaataacgtcgaaggctaaactttgtggagctctgtcactgctcgcgtgggctgttgccggatttttcttctttcaagatgatacagattggacgagatctgcggcggcgagccgagcactcaacaagccatgcctgctactcggcttcttcggttcccacgatttatggcacatcttcggagcattggccggtcttttcacattcattttcgtctcctttgttgatgatgatctcattaatacacgcaaaacttcgattaacattttctagagtaattttgttttccctatccggtttttcatatttcaactttttctcctgccttaatacgtagcccgatctctcatttcttcatgttttaagaactttctgaatctatgtaattagttggtctactttgaaacatttttactgtattcatctccacggctccctacctccctgtgaatataattccaaatttagctcctctctacgcagtgatctggtgtttataacatgtttatttatttttcccaacatttcccaatttcaggtgttcacttgtttgtttgctccccctctatgcataaattttcagccact

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