LOCUS       NM_031685               2099 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Rattus norvegicus golgi SNAP receptor complex member 2 (Gosr2),
            mRNA.
ACCESSION   NM_031685
VERSION     NM_031685.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   2  (bases 1 to 2099)
  AUTHORS   Suga,K., Hattori,H., Saito,A. and Akagawa,K.
  TITLE     RNA interference-mediated silencing of the syntaxin 5 gene induces
            Golgi fragmentation but capable of transporting vesicles
  JOURNAL   FEBS Lett 579 (20), 4226-4234 (2005)
   PUBMED   16081076
REFERENCE   3  (bases 1 to 2099)
  AUTHORS   Peng,J., Huang,C.H., Short,M.K. and Jubinsky,P.T.
  TITLE     Magmas gene structure and evolution
  JOURNAL   In Silico Biol 5 (3), 251-263 (2005)
   PUBMED   15984936
REFERENCE   4  (bases 1 to 2099)
  AUTHORS   Zhang,T. and Hong,W.
  TITLE     Ykt6 forms a SNARE complex with syntaxin 5, GS28, and Bet1 and
            participates in a late stage in endoplasmic reticulum-Golgi
            transport
  JOURNAL   J Biol Chem 276 (29), 27480-27487 (2001)
   PUBMED   11323436
REFERENCE   5  (bases 1 to 2099)
  AUTHORS   Lowe,S.L., Peter,F., Subramaniam,V.N., Wong,S.H. and Hong,W.
  TITLE     A SNARE involved in protein transport through the Golgi apparatus
  JOURNAL   Nature 389 (6653), 881-884 (1997)
   PUBMED   9349823
REFERENCE   6  (bases 1 to 2099)
  AUTHORS   Hay,J.C., Chao,D.S., Kuo,C.S. and Scheller,R.H.
  TITLE     Protein interactions regulating vesicle transport between the
            endoplasmic reticulum and Golgi apparatus in mammalian cells
  JOURNAL   Cell 89 (1), 149-158 (1997)
   PUBMED   9094723
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC061994.1.
            
            On Jan 1, 2004 this sequence version replaced NM_031685.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC061994.1, CO573750.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.1"
     gene            1..2099
                     /gene="Gosr2"
                     /note="golgi SNAP receptor complex member 2"
                     /db_xref="GeneID:64154"
                     /db_xref="RGD:62079"
     exon            1..42
                     /gene="Gosr2"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    2..4
                     /gene="Gosr2"
                     /note="upstream in-frame stop codon"
     CDS             14..652
                     /gene="Gosr2"
                     /note="membrin; 27 kDa Golgi SNARE protein"
                     /codon_start=1
                     /product="Golgi SNAP receptor complex member 2"
                     /protein_id="NP_113873.1"
                     /db_xref="GeneID:64154"
                     /db_xref="RGD:62079"
                     /translation="

MEPLYQQTHKQVHEIQSHMGRLETADKQSVHLVENEIQASIDQIFSHLERLEILSSKEPPNRRQNAKLRVDQLKYDVQHLQTALRNFQHRRQAKEQQERQRDELLSRTFTTNDSDTTIPMDESLQFNSSLQNIHHGMDDLIGGGHSILEGLRAQRLTLKGTQKKILDIANMLGLSNTVMRLIEKRAFQDKYFMIGGMLLTCAVMFLVVQYLT"

     misc_feature    14..16
                     /gene="Gosr2"
                     /note="N-acetylmethionine.
                     /evidence=ECO:0000250|UniProtKB:O14653; propagated from
                     UniProtKB/Swiss-Prot (O35165.2); acetylation site"
     misc_feature    365..373
                     /gene="Gosr2"
                     /note="propagated from UniProtKB/Swiss-Prot (O35165.2);
                     Region: IxM motif, signal for cargo packaging into
                     COPII-coated vesicles.
                     /evidence=ECO:0000250|UniProtKB:O14653"
     misc_feature    371..568
                     /gene="Gosr2"
                     /note="SNARE motif of GS27; Region: SNARE_GS27; cd15863"
                     /db_xref="CDD:277216"
     misc_feature    order(386..394,398..415,419..424,431..436,440..457,
                     461..466,470..478,482..499,503..508,512..520,524..529,
                     533..541,545..550,554..556)
                     /gene="Gosr2"
                     /note="heterotetramer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:277216"
     misc_feature    473..475
                     /gene="Gosr2"
                     /note="zero layer; other site"
                     /db_xref="CDD:277216"
     misc_feature    584..646
                     /gene="Gosr2"
                     /note="propagated from UniProtKB/Swiss-Prot (O35165.2);
                     transmembrane region"
     exon            43..107
                     /gene="Gosr2"
                     /inference="alignment:Splign:2.1.0"
     exon            108..216
                     /gene="Gosr2"
                     /inference="alignment:Splign:2.1.0"
     exon            217..349
                     /gene="Gosr2"
                     /inference="alignment:Splign:2.1.0"
     exon            350..490
                     /gene="Gosr2"
                     /inference="alignment:Splign:2.1.0"
     exon            491..2075
                     /gene="Gosr2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

ctaggccggcatcatggagccactataccaacaaacgcacaagcaggtccacgagatccagtctcacatgggacgcctggagacggcagacaagcagtctgtgcacttagtggaaaatgaaatccaagcaagcatagaccagatattcagccacctggagcgtctggagattctgtcaagcaaggagccccccaatagaaggcagaacgccaaacttcgtgtcgaccagctaaagtacgacgtccagcacttgcagactgccctcaggaactttcagcaccggcgccaagccaaggagcagcaggagagacagcgagatgagcttctgtctcgcaccttcaccactaacgactctgacaccaccattcccatggatgaatcactgcagtttaactcctccctccagaacattcaccacggcatggatgacctcattggaggcgggcacagtattctggagggactgagggcccagagactgaccttgaaggggactcagaaaaagatcctcgacattgccaacatgctcggcttgtccaacaccgtgatgaggctgattgagaagcgggccttccaggacaagtacttcatgatcggtgggatgctgctcacttgtgcagttatgtttctcgtggtgcagtacctgacatgagccagctgtacccagcactggacagccttcccattgtgtgcgcatgtgcaagcaagaagtgggctgggaggcccttttgaaatgtatgccttaactgtgaagacacctctccctccaggactaatcgtggcttagtatcaaacctgctttgttttctgtgacatctggggagtaggacctagggtcaccaagatgtgtggtacttaggaggtggttcaagaccctgttctctggctttcacgggggtggggtggggtggggagggatggctaggttttgtggtttgtccacacagctgatgcagaggaaagtgtgcattatgaggcctgcacacaggactgtccactctgttcacttctggtcatcaccagcttttgtggctcctgagaggtgggctggagcacagtgagatgaggaaagaggtctttccttacaccatctgggatggatcagttctcacatccttgcttctagccactactcggccccagcccctaagaaaacaggacatgtaggtgactaaccacgaacaccagcaccctttcctggaagcagctactccagggaagcagagacatcagtgctgctgctgataatgtaagcgtttccgtgccacggttgctgggtgtttgtccttcctgaagtgaggctagcagtgttcccagggagtgtttagtctggaccctgaagtcctgagtcaccaggacttgatacagcaattggctcttgcagttcggagacagtggctcagcacctccacccaggctctgatcttgggcctttaaaaggagccatgagcaaagggtgacttgtcagttacagattcatctaattctgccatctcagatcctttgactatctctcccttgaaatacattagcaatatatcaatcagctaagcctccattttccccagccctcgtaggccaccctggaggtgtccctggtaagaatgtttttgtgagactgtttcagggaccaggtcattctcacttgtcccagacgtgattaaggctatgtcagtacctggtgtattgcagaatttgtttgaaagttaatgtatctcaagcacacctattgtgattaatcttcgcaagtactagaacggtccagtgagtttatttgttcatcagtaacgagccctgcccacccaaacagttctaaatttagtagcctcctggtgggaaaaacagatgccaggattcctaagaactggaaactggtcagtattaatccttcctctgattgccccacctacttcctgtgtttgcttaagtcctgtgcttttccctcctcacagtgcactatgtctcaccctcctactgagttgcagtactcctctctcccatacgtctgtggcatcctgtccacatctgtggcatccttttgggaactgtctcaattgaacacattttaaacctgaaaaaaaaaaaaaaaaaaaaaaaaa

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