2024-04-26 07:37:45, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_023951 567 bp mRNA linear ROD 20-MAR-2023 DEFINITION Rattus norvegicus SEBOX homeobox (Sebox), mRNA. ACCESSION NM_023951 VERSION NM_023951.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 567) AUTHORS Moreno DL, Salazar Z, Betancourt M, Casas E, Ducolomb Y, Gonzalez C and Bonilla E. TITLE Sebox plays an important role during the early mouse oogenesis in vitro JOURNAL Zygote 22 (1), 64-68 (2014) PUBMED 22805237 REFERENCE 2 (bases 1 to 567) AUTHORS Kim KH, Kim EY and Lee KA. TITLE SEBOX is essential for early embryogenesis at the two-cell stage in the mouse JOURNAL Biol Reprod 79 (6), 1192-1201 (2008) PUBMED 18753614 REFERENCE 3 (bases 1 to 567) AUTHORS Cinquanta M, Rovescalli AC, Kozak CA and Nirenberg M. TITLE Mouse Sebox homeobox gene expression in skin, brain, oocytes, and two-cell embryos JOURNAL Proc Natl Acad Sci U S A 97 (16), 8904-8909 (2000) PUBMED 10922053 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF284338.1. ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..567 /organism="Rattus norvegicus" /mol_type="mRNA" /strain="Sprague-Dawley" /db_xref="taxon:10116" /chromosome="10" /map="10q25" gene 1..567 /gene="Sebox" /gene_synonym="Og9x" /note="SEBOX homeobox" /db_xref="GeneID:58922" /db_xref="RGD:62077" CDS 1..567 /gene="Sebox" /gene_synonym="Og9x" /note="homeobox OG-9; skin-, embryo-, brain- and oocyte-specific homeobox; OG9 homeobox" /codon_start=1 /product="homeobox protein SEBOX" /protein_id="NP_076441.1" /db_xref="GeneID:58922" /db_xref="RGD:62077" /translation="
MASPVEASPGCASGLGPHRRKRTTFSVGQLLELERVFAARPYPDISTREHLAQITHLPEAKIQVWFQNRRAKRIKDRKPGALNARLELPPNCSLPDTPQLSWDPGTPSHPLHSTSSAQQTSACPPQTSCLAPILGPGQSWSGAKAAAPWGTSEVSGVHSLEQIVPQTSLGNLSDLIYTSAIVTNVDHS"
misc_feature <37..363 /gene="Sebox" /gene_synonym="Og9x" /note="Homeodomain-containing transcription factor [Transcription]; Region: COG5576" /db_xref="CDD:227863" misc_feature order(55..69,73..75,124..126,142..144,181..183,187..192, 199..204,208..216) /gene="Sebox" /gene_synonym="Og9x" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature 61..216 /gene="Sebox" /gene_synonym="Og9x" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(61..63,70..72,190..192,199..204,211..213) /gene="Sebox" /gene_synonym="Og9x" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 238..375 /gene="Sebox" /gene_synonym="Og9x" /note="propagated from UniProtKB/Swiss-Prot (Q9ERS8.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" exon 1..28 /gene="Sebox" /gene_synonym="Og9x" /inference="alignment:Splign:2.1.0" exon 29..189 /gene="Sebox" /gene_synonym="Og9x" /inference="alignment:Splign:2.1.0" exon 190..567 /gene="Sebox" /gene_synonym="Og9x" /inference="alignment:Splign:2.1.0" ORIGIN
atggccagtcctgtggaggcatctccaggctgtgccagtgggttgggtccccatcggaggaagaggaccacttttagtgttgggcagttgctggagctggaacgggtatttgcagctaggccctatcctgacatcagcacccgtgagcacctggctcagataactcacctgccagaagccaagatccaggtgtggttccagaaccgtcgagccaagagaatcaaggacagaaagccaggagccctaaacgccaggctggagcttcccccaaactgttctcttccagacactccccagctatcttgggaccctggaacaccaagccatcctctacactctaccagttcagctcagcagacttcggcatgcccaccacagacctcctgcctagcccccattttgggtccagggcagagttggtcaggggctaaagctgcagccccatgggggacaagtgaggtgtcaggagttcactctttagagcaaattgttcctcagacttcactgggcaacctgtctgaccttatctatacctcagccatcgtcaccaatgtagaccactcctaa
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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