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Previous release (v1)
2026-09-16 22:17:49, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS NM_001435022 6135 bp mRNA linear MAM 28-JUN-2025 DEFINITION Bos taurus dicer 1, ribonuclease III (DICER1), transcript variant 2, mRNA. ACCESSION NM_001435022 VERSION NM_001435022.1 KEYWORDS RefSeq. SOURCE Bos taurus (domestic cattle) ORGANISM Bos taurus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos. REFERENCE 1 (bases 1 to 6135) AUTHORS Burrola-Barraza,M.E., Hernandez-Seanez,R., Barcelo-Fimbres,M., Rodriguez-Almeida,F.A., Gonzalez-Rodriguez,E., Garcia-Quinonez,S., Grado-Ahuir,J.A. and Moreno-Brito,V. TITLE Dicer gene expression during early bovine embryo development JOURNAL Mol Reprod Dev 78 (9), 622 (2011) PUBMED 21823189 REMARK GeneRIF: Studied Dicer gene expression during early bovine embryo development.An increase in Dicer expression was detected in the mature oocytes sampled (P<0.05), implying that gene repression occurs during meiosis II. REFERENCE 2 (bases 1 to 6135) AUTHORS Zimin,A.V., Delcher,A.L., Florea,L., Kelley,D.R., Schatz,M.C., Puiu,D., Hanrahan,F., Pertea,G., Van Tassell,C.P., Sonstegard,T.S., Marcais,G., Roberts,M., Subramanian,P., Yorke,J.A. and Salzberg,S.L. TITLE A whole-genome assembly of the domestic cow, Bos taurus JOURNAL Genome Biol 10 (4), R42 (2009) PUBMED 19393038 REFERENCE 3 (bases 1 to 6135) AUTHORS Ishiwata,H., Katsuma,S., Kizaki,K., Patel,O.V., Nakano,H., Takahashi,T., Imai,K., Hirasawa,A., Shiojima,S., Ikawa,H., Suzuki,Y., Tsujimoto,G., Izaike,Y., Todoroki,J. and Hashizume,K. TITLE Characterization of gene expression profiles in early bovine pregnancy using a custom cDNA microarray JOURNAL Mol Reprod Dev 65 (1), 9-18 (2003) PUBMED 12658628 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from NKLS02000021.1. ##Evidence-Data-START## Transcript exon combination :: GGVG01110265.1, GGVG01110253.1 [ECO:0000332] RNAseq introns :: partial sample support SAMEA6648753, SAMEA6648754 [ECO:0000350] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-140 NKLS02000021.1 60027293-60027432 c 141-329 NKLS02000021.1 59999254-59999442 c 330-492 NKLS02000021.1 59998291-59998453 c 493-623 NKLS02000021.1 59997182-59997312 c 624-758 NKLS02000021.1 59995327-59995461 c 759-919 NKLS02000021.1 59994718-59994878 c 920-1088 NKLS02000021.1 59992394-59992562 c 1089-1561 NKLS02000021.1 59990633-59991105 c 1562-1694 NKLS02000021.1 59983033-59983165 c 1695-1937 NKLS02000021.1 59981525-59981767 c 1938-2089 NKLS02000021.1 59980839-59980990 c 2090-2222 NKLS02000021.1 59978157-59978289 c 2223-2298 NKLS02000021.1 59977416-59977491 c 2299-2438 NKLS02000021.1 59976592-59976731 c 2439-2618 NKLS02000021.1 59974547-59974726 c 2619-2832 NKLS02000021.1 59974100-59974313 c 2833-2986 NKLS02000021.1 59973744-59973897 c 2987-3169 NKLS02000021.1 59972111-59972293 c 3170-3275 NKLS02000021.1 59971739-59971844 c 3276-3451 NKLS02000021.1 59971055-59971230 c 3452-4235 NKLS02000021.1 59969311-59970094 c 4236-4391 NKLS02000021.1 59966408-59966563 c 4392-5280 NKLS02000021.1 59962523-59963411 c 5281-5549 NKLS02000021.1 59960562-59960830 c 5550-5712 NKLS02000021.1 59957160-59957322 c 5713-5788 NKLS02000021.1 59956978-59957053 c 5789-6135 NKLS02000021.1 59956306-59956652 c FEATURES Location/Qualifiers source 1..6135 /organism="Bos taurus" /mol_type="mRNA" /db_xref="taxon:9913" /chromosome="21" /map="21" /breed="Hereford" gene 1..6135 /gene="DICER1" /gene_synonym="Dicer" /note="dicer 1, ribonuclease III" /db_xref="BGD:BT29583" /db_xref="GeneID:337871" /db_xref="VGNC:VGNC:28063" exon 1..140 /gene="DICER1" /gene_synonym="Dicer" /inference="alignment:Splign:2.1.0" exon 141..329 /gene="DICER1" /gene_synonym="Dicer" /inference="alignment:Splign:2.1.0" misc_feature 183..185 /gene="DICER1" /gene_synonym="Dicer" /note="upstream in-frame stop codon" CDS 186..5954 /gene="DICER1" /gene_synonym="Dicer" /EC_number="3.1.26.3" /note="Dicer1, Dcr-1 homolog; dicer 1, ribonuclease type III; ribonuclease III" /codon_start=1 /product="endoribonuclease Dicer" /protein_id="NP_001421951.1" /db_xref="BGD:BT29583" /db_xref="GeneID:337871" /db_xref="VGNC:VGNC:28063" /translation="
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVSASWTKEKWNQEFTKHQVLVMTCYVALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALNFINDCNISVHSKERDSTLISKQILSDCRAVLVVLGPWCADKVAGMMVRELQKHIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEEDEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGEADTEPVVDDDDVFPPYVLRPEDGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESYPRPGQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSLQMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGVGVRSLPVDFRYPNLDFGWKKSIDSKSFISIANSSSAENENYCKHSTIVVPENAAHQGANRTSPLENHDQMSVNCRTLFSESPGKLQIEVSTDLTAINGLSYNKSLANGSYDLANRDFCQGNHLNYYKQEIPVQPTTSYPIQNLYNYENQPKPSDECTLLSNKYLDGNANTSTSDGSPVTAAVPGTTETGEAPPDRTASEQSPSPGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSNTEKWEKDEMTKDCMLANGKLDDDFEEEEEEEEDLMWRAHKEDADDEDDFLEYDQEHIKFIDNMLMGSGAFVKKISLSPFSATDSAYEWKMPKKSSLGSLPFSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQQKNLSGSRAAASGAGYRASVLKDLEYGCLKIPPRCMFDHPDADRTLRHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPNS"
misc_feature 309..902
/gene="DICER1"
/gene_synonym="Dicer"
/note="DEXH-box helicase domain of endoribonuclease Dicer;
Region: DEXHc_dicer; cd18034"
/db_xref="CDD:350792"
misc_feature order(309..320,327..329,378..401,522..524,711..713,
804..806)
/gene="DICER1"
/gene_synonym="Dicer"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:350792"
misc_feature order(486..491,558..563,636..638,642..647,654..656,
729..737)
/gene="DICER1"
/gene_synonym="Dicer"
/note="nucleic acid binding site [nucleotide binding];
other site"
/db_xref="CDD:350792"
misc_feature 708..719
/gene="DICER1"
/gene_synonym="Dicer"
/note="propagated from UniProtKB/Swiss-Prot (Q6TUI4.3);
Region: DECH box"
misc_feature 951..1970
/gene="DICER1"
/gene_synonym="Dicer"
/note="propagated from UniProtKB/Swiss-Prot (Q6TUI4.3);
Region: Required for interaction with PRKRA and TARBP2.
/evidence=ECO:0000250"
misc_feature 996..1280
/gene="DICER1"
/gene_synonym="Dicer"
/note="Partner-binding domain of the endoribonuclease
Dicer; Region: Dicer_PBD; cd15903"
/db_xref="CDD:277191"
misc_feature order(1011..1016,1023..1025,1029..1034,1209..1214,
1221..1226,1233..1235,1242..1247,1254..1256)
/gene="DICER1"
/gene_synonym="Dicer"
/note="Trbp binding interface [polypeptide binding]; other
site"
/db_xref="CDD:277191"
misc_feature 1299..1877
/gene="DICER1"
/gene_synonym="Dicer"
/note="C-terminal helicase domain of the endoribonuclease
Dicer; Region: SF2_C_dicer; cd18802"
/db_xref="CDD:350189"
misc_feature 1413..1484
/gene="DICER1"
/gene_synonym="Dicer"
/note="propagated from UniProtKB/Swiss-Prot (Q6TUI4.3);
Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
misc_feature 1422..1424
/gene="DICER1"
/gene_synonym="Dicer"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9UPY3; propagated from
UniProtKB/Swiss-Prot (Q6TUI4.3); phosphorylation site"
misc_feature 1428..1430
/gene="DICER1"
/gene_synonym="Dicer"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9UPY3; propagated from
UniProtKB/Swiss-Prot (Q6TUI4.3); phosphorylation site"
misc_feature order(1530..1538,1746..1748,1803..1805,1809..1811)
/gene="DICER1"
/gene_synonym="Dicer"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:350189"
misc_feature order(1758..1760,1764..1766,1839..1841,1845..1847)
/gene="DICER1"
/gene_synonym="Dicer"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:350189"
misc_feature 2070..2336
/gene="DICER1"
/gene_synonym="Dicer"
/note="Dicer dimerization domain; Region: Dicer_dimer;
pfam03368"
/db_xref="CDD:460900"
misc_feature 2838..3206
/gene="DICER1"
/gene_synonym="Dicer"
/note="PAZ domain, dicer_like subfamily. Dicer is an RNAse
involved in cleaving dsRNA in the RNA interference
pathway. It generates dsRNAs which are approximately 20 bp
long (siRNAs), which in turn target hydrolysis of
homologous RNAs. PAZ domains are named...; Region:
PAZ_dicer_like; cd02843"
/db_xref="CDD:239209"
misc_feature order(3027..3029,3066..3068,3084..3086,3096..3098,
3150..3152,3174..3176,3180..3182)
/gene="DICER1"
/gene_synonym="Dicer"
/note="nucleic acid-binding interface [nucleotide
binding]; other site"
/db_xref="CDD:239209"
misc_feature 3228..3230
/gene="DICER1"
/gene_synonym="Dicer"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9UPY3; propagated from
UniProtKB/Swiss-Prot (Q6TUI4.3); phosphorylation site"
misc_feature 3663..3665
/gene="DICER1"
/gene_synonym="Dicer"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9UPY3; propagated from
UniProtKB/Swiss-Prot (Q6TUI4.3); phosphorylation site"
misc_feature 3921..4058
/gene="DICER1"
/gene_synonym="Dicer"
/note="propagated from UniProtKB/Swiss-Prot (Q6TUI4.3);
Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
misc_feature 4071..>4346
/gene="DICER1"
/gene_synonym="Dicer"
/note="Ribonuclease III family; Region: RIBOc; smart00535"
/db_xref="CDD:197778"
misc_feature order(4122..4127,4134..4139,4146..4148,4155..4160,
4167..4172,4176..4184,4212..4214)
/gene="DICER1"
/gene_synonym="Dicer"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238333"
misc_feature 4563..4565
/gene="DICER1"
/gene_synonym="Dicer"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9UPY3; propagated from
UniProtKB/Swiss-Prot (Q6TUI4.3); phosphorylation site"
misc_feature 4587..4589
/gene="DICER1"
/gene_synonym="Dicer"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q8R418; propagated from
UniProtKB/Swiss-Prot (Q6TUI4.3); phosphorylation site"
misc_feature 4593..4595
/gene="DICER1"
/gene_synonym="Dicer"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9UPY3; propagated from
UniProtKB/Swiss-Prot (Q6TUI4.3); phosphorylation site"
misc_feature 5229..5723
/gene="DICER1"
/gene_synonym="Dicer"
/note="Ribonuclease III C terminal domain. This group
consists of eukaryotic, bacterial and archeal ribonuclease
III (RNAse III) proteins. RNAse III is a double stranded
RNA-specific endonuclease. Prokaryotic RNAse III is
important in post-transcriptional...; Region: RIBOc;
cd00593"
/db_xref="CDD:238333"
misc_feature order(5289..5294,5301..5306,5313..5315,5322..5327,
5334..5339,5343..5351,5379..5381,5643..5645,5676..5678)
/gene="DICER1"
/gene_synonym="Dicer"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238333"
misc_feature order(5289..5291,5298..5300,5310..5312,5613..5615,
5622..5624)
/gene="DICER1"
/gene_synonym="Dicer"
/note="active site"
/db_xref="CDD:238333"
misc_feature order(5298..5300,5613..5615,5622..5624)
/gene="DICER1"
/gene_synonym="Dicer"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:238333"
misc_feature 5601..5603
/gene="DICER1"
/gene_synonym="Dicer"
/note="Important for activity. /evidence=ECO:0000250;
propagated from UniProtKB/Swiss-Prot (Q6TUI4.3); other
site"
misc_feature 5736..5924
/gene="DICER1"
/gene_synonym="Dicer"
/note="double-stranded RNA binding motif of
endoribonuclease Dicer and similar proteins; Region:
DSRM_DICER; cd10843"
/db_xref="CDD:380680"
misc_feature order(5736..5741,5745..5750,5757..5762,5769..5774,
5784..5786,5799..5807,5811..5813,5817..5819,5868..5879,
5886..5888)
/gene="DICER1"
/gene_synonym="Dicer"
/note="putative RNA binding site [nucleotide binding];
other site"
/db_xref="CDD:380680"
misc_feature 5787..5789
/gene="DICER1"
/gene_synonym="Dicer"
/note="Phosphoserine.
/evidence=ECO:0000250|UniProtKB:Q9UPY3; propagated from
UniProtKB/Swiss-Prot (Q6TUI4.3); phosphorylation site"
exon 330..492
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 493..623
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 624..758
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 759..919
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 920..1088
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 1089..1561
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 1562..1694
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 1695..1937
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 1938..2089
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 2090..2222
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 2223..2298
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 2299..2438
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 2439..2618
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 2619..2832
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 2833..2986
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 2987..3169
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 3170..3275
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 3276..3451
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 3452..4235
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 4236..4391
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 4392..5280
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 5281..5549
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 5550..5712
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 5713..5788
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
exon 5789..6135
/gene="DICER1"
/gene_synonym="Dicer"
/inference="alignment:Splign:2.1.0"
ORIGIN
ggggacgaggcgacggcgagcgggaggacatggcggcggcggcggcggcgccgggcggcaccgggaggcctgggctgtgacgcgcgcgccggagcgggggtccgatggttctcgaaggcccgcggcgccccgtgctgcagtaagctgtgctagaacaaaaatgcaatgaaagagacactggatgaatgaaaagccctgctttgcaacccctcagcatggcaggcctgcagctcatgacccctgcttcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataacatttatacgccaagaaaatatcaggttgaactgcttgaagcagctctggatcataataccatagtctgtttaaacactggctcagggaagacgtttattgcagtactactcactaaagagctgtcttatcagatcaggggagacttcaacagaaatggcaaaaggacggtgttcttggtcaactctgcaaaccaggttgcccaacaagtgtcagctgtcagaactcactcagatctcaaggtcggggaatactcaaacctagaagtaagtgcatcttggacaaaagagaaatggaaccaagagtttactaaacatcaggttctcgttatgacttgctatgtcgccttgaatgttttgaaaaatggttacttatcactgtcagacattaaccttttggtgtttgatgagtgtcatcttgcaatcctagaccacccctaccgagaaattatgaagctttgtgaaaattgtccatcatgtcctcgtattttgggactaactgcttccattttaaatgggaaatgtgatccagaggaattggaagagaagattcagaaactggagaaaattcttaagagtaatgctgaaactgcaactgacttggtggtcttagacagatatacttctcagccatgtgagattgtggtagactgtggaccatttactgacagaagtgggctttatgaaagactgctgatggagttagaagaagcacttaattttatcaatgactgtaacatatctgtacattcaaaagaaagagattctactttaatttctaaacagatactctcagactgccgtgcggtcctggttgtcctgggaccctggtgtgccgataaagtagctggaatgatggtcagagagctgcagaaacacatcaaacatgagcaggaggagctgcaccggaagtttctgttgttcacagacactttcctacggaaaatccacgccctgtgtgaagagcacttctcccctgcctcgcttgacctgaagtttgtcactcctaaagtaataaagctgctcgagatcttacgcaaatacaaaccgtatgagcggcagcagtttgaaagcgtggagtggtataataataggaaccaggataattacgtgtcctggagcgattctgaggatgacgaggaagatgaagagattgaagagaaagaaaagccagagacaaattttccttctccgtttaccaacattttgtgtggaattatttttgtggaaagaagatacacagccgtggtcttaaacagattgataaaggaagctggcaaacaagatccagagctggcttacatcagcagcaattttataactggacatggcatcggaaagaatcagcctcggaacaaacagatggaagcggaattcagaaaacaggaagaggtacttaggaaatttcgagcacatgaaaccaacctgcttattgcaacaagtattgtggaggagggtgttgacataccgaaatgcaacttggtggttcgtttcgatctgcccacagagtatcgatcctacgttcagtccaagggaagagcgagggcacccatctctaattatgtaatgttagcagacacagataaaataaagagttttgaagaagaccttaaaacatacaaagctattgaaaagatcttgcgaaacaaatgttccaagtcggttgataccggggaggccgacacggagcccgtggtggatgacgacgatgttttcccaccgtatgtgctgaggcctgaggacggtccccgcgtcacgatcaacacggccattgggcacgtcaacagatactgtgctagattaccaagtgatccgtttactcatctggctcctaaatgtagaacccgagagttgcctgatggtacattttattcaactctttatctgccaattaactcacctcttcgagcctccattgttggtcccccaatgagctgcattcggttggctgaaagagtcgtggctctcatttgctgtgaaaaactgcacaaaattggcgaactggatgaccatttgatgccagttgggaaggagactgttaaatatgaggaagagctggatttacacgatgaagaagagaccagtgttccaggaagaccaggttccacaaaacgaagacagtgctacccaaaagcaattccagaatgtttgagggagagctaccccaggcctggtcagccctgttacctgtacgtgatcggaatggtcctgacgacacctttacctgatgagctcaacttcagaaggcggaagctctacccccctgaggacaccacaagatgctttggaatactgacagccaagcccatacctcagatcccacactttcctgtgtacacgcgctctggagaggtgaccatatctattgagttgaagaagtccggcttcacgttatctctgcaaatgcttgagttgatcacaaggcttcaccagtatatattctcacatattcttcggcttgaaaaacctgcactagaatttaaacccacagacgcggactcagcctactgcgttctacctcttaatgttgttaatgactccagcactttggacattgactttaaattcatggaagatatcgagaaatctgaagctcgaataggcattcccagcacaaagtattcaaaagaaactccttttgttttcaaattagaagattaccaagatgcagttatcattccaagataccgcaattttgatcagcctcatcgattttatgtcgctgacgtgtacactgatcttacccccctgagtaaatttccttcccctgagtatgaaacgtttgcggagtattataaaacaaagtataaccttgacctgaccaatctcaaccagccgctgctggacgtggaccacacgtcttcacgactcaatcttttgacacctcgtcatttgaatcagaaggggaaagctctccctctgagcagtgctgagaagaggaaagccaagtgggagagcctgcagaataagcagatactggttccagaactctgtgctatacatccaattccagcatcactgtggagaaaagccgtttgtctcccgagcatactttaccgccttcactgccttctgactgcagaggagctcagagcccagacggccagcgacgctggtgtgggagtcaggtcacttcctgtggattttagataccctaacttagacttcgggtggaaaaaatctatcgacagcaaatctttcatctcaattgctaactcctcttcagctgaaaatgagaattactgtaagcacagcacaattgtcgtccctgaaaatgctgcacatcaaggtgctaatagaacctcccctctagaaaatcatgaccaaatgtctgtgaactgcagaacgttgttcagcgagtcacctggtaagctccaaattgaagtttcaacagatctgacagcaattaatggtctttcttacaataaaagtcttgccaatggcagttacgatttagctaacagagacttttgccaaggaaaccatctgaattactacaagcaggaaatacctgtacaaccaactacctcatatcccattcagaatttatacaattacgagaaccagcccaagcccagcgatgaatgtactctactgagtaataaataccttgatggaaatgctaacacatctacctcagatggaagtcccgtgacggctgccgtgcctggtactacagagactggggaggcgcccccggacaggacagcttctgagcagagcccttctcctgggtactcctcgaggacgcttggccccaaccctgggctcattcttcaggctttgaccctttcgaacgctagtgatggatttaacctggagcggctcgagatgcttggcgactccttcctcaagcatgccatcaccacgtatctcttctgcacttatcctgatgcgcatgagggccgcctttcctacatgagaagcaaaaaggtcagcaactgtaatctgtatcggcttggaaaaaagaaggggctgcccagccgcatggtggtgtccatatttgacccccctgtgaattggcttcctcctggttacgtagtaaatcaagacaaaagtaacacagagaaatgggaaaaagatgaaatgacaaaagactgcatgttggctaatggcaaactggacgatgacttcgaggaggaggaagaggaggaggaggacctgatgtggagggctcacaaggaggatgcggacgatgaggacgacttcctggaatacgatcaggagcacatcaagttcatagataacatgctgatggggtcaggggctttcgtcaagaaaatctctctttctcctttttctgccaccgattctgcatacgagtggaaaatgcccaaaaagtcctcccttggtagtctgccattctcatccgattttgaggatttcgactacagctcctgggatgcgatgtgctatctggatccgagcaaagccgttgaagaggatgactttgtggtggggttctggaatccatcagaagaaaactgtggtgtggacacagggaagcagtccatctcttacgacctgcacaccgagcagtgcattgccgacaaaagcatagccgactgtgtggaagccctgctgggctgctatttaaccagctgtggcgagagggctgctcagcttttcctctgttcgctggggctgaaggtgctcccggtaattaaaaggactgatcgggaaaaggccatgtgcccgaccagggagaatttcaccagccaacaaaagaacctttcagggagccgtgcggccgcctctggagccggctaccgagcctctgtgttgaaagacttggagtatgggtgtttgaagatccccccgaggtgtatgtttgatcaccccgacgcagaccggacactgcgtcacctgatctcgggttttgaaaatttcgaaaagaaaatcaactacagattcaagaataaggcttaccttctacaggcttttacacacgcctcctaccactacaatacgatcacggattgttaccagcgcttagaattcctgggagatgcaattttggactacctcataactaagcacctttatgaagacccacggcagcactccccaggggtcctgactgacctgcgctctgctctggtcaacaataccatcttcgcgtctttggctgtgaagtatgactaccacaagtactttaaggccgtttctcccgagctcttccatgtcatcgacgatttcgtgcagtttcagctcgagaagaacgaaatgcaaggaatggattctgagcttaggagatccgaggaggatgaagagaaggaagaggatattgaagttccaaaggccatgggggatattttcgagtcactcgcgggcgccatttacatggacagcgggatgtcgctggagacggtctggcaggtgtactatcccatgatgcggccgctgatcgaaaaattttctgcaaatgtgccccgttcccctgtgcgagaattgcttgaaatggaaccagaaactgccaaattcagcccagctgagagaacctacgatggcaaggtcagagtcaccgtggaagtggtcgggaaggggaagttcaaaggcgttggccgaagttacaggattgccaagtctgcagcagcaagaagagccctgcgaagcctcaaagctaatcaacctcaggttcccaatagctgaaaacccctttttaaattaaaaaaaaaaaaaaaaaaggaaagcagaattaaggtggaaaatatttaagttgaaaaggatgatttaaaactgatagtgagtggaacgagttgaaggcagaacgtaaagtttgtttgataacaagatagattacagaataaaacatttaacctatgtataaaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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