LOCUS       NM_001287364             636 bp    mRNA    linear   MAM 02-APR-2025
DEFINITION  Tupaia chinensis claudin 1 (CLDN1), mRNA.
ACCESSION   NM_001287364 XM_006156720
VERSION     NM_001287364.1
KEYWORDS    RefSeq.
SOURCE      Tupaia chinensis (Chinese tree shrew)
  ORGANISM  Tupaia chinensis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae;
            Tupaia.
REFERENCE   1  (bases 1 to 636)
  AUTHORS   Yan,H., Zhong,G., Xu,G., He,W., Jing,Z., Gao,Z., Huang,Y., Qi,Y.,
            Peng,B., Wang,H., Fu,L., Song,M., Chen,P., Gao,W., Ren,B., Sun,Y.,
            Cai,T., Feng,X., Sui,J. and Li,W.
  TITLE     Sodium taurocholate cotransporting polypeptide is a functional
            receptor for human hepatitis B and D virus
  JOURNAL   Elife 1, e00049 (2012)
   PUBMED   23150796
  REMARK    Erratum:[Elife. 2014;3:e05570]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 636)
  AUTHORS   Tong,Y., Zhu,Y., Xia,X., Liu,Y., Feng,Y., Hua,X., Chen,Z., Ding,H.,
            Gao,L., Wang,Y., Feitelson,M.A., Zhao,P. and Qi,Z.T.
  TITLE     Tupaia CD81, SR-BI, claudin-1, and occludin support hepatitis C
            virus infection
  JOURNAL   J Virol 85 (6), 2793-2802 (2011)
   PUBMED   21177818
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from EF584564.1.
            
            On Dec 12, 2013 this sequence version replaced XM_006156720.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: EF584564.1, JU124006.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00794552, SAMN01085955
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Tupaia chinensis"
                     /mol_type="mRNA"
                     /db_xref="taxon:246437"
     gene            1..636
                     /gene="CLDN1"
                     /gene_synonym="Claudin-1"
                     /note="claudin 1"
                     /db_xref="GeneID:102488870"
     CDS             1..636
                     /gene="CLDN1"
                     /gene_synonym="Claudin-1"
                     /note="claudin-1 antigen"
                     /codon_start=1
                     /product="claudin-1"
                     /protein_id="NP_001274293.1"
                     /db_xref="GeneID:102488870"
                     /translation="

MANAGLQLLGFILAFVGWIGAIVSTALPQWKIYSYAGDNIVTAQAIYEGLWMSCVSQSTGQIQCKVFDSLLNLNSTLQATRALMVVGILLGLIAIFVATIGMKCMKCMEDDEVQKMRMAVFGGMIFLIAGLVILVATAWYSHRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGALLCCSCPRKTSSYPTPRPYPKPAPSSGKDYV"

     misc_feature    13..519
                     /gene="CLDN1"
                     /gene_synonym="Claudin-1"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; pfam00822"
                     /db_xref="CDD:395662"
     exon            1..223
                     /gene="CLDN1"
                     /gene_synonym="Claudin-1"
                     /inference="alignment:Splign:2.1.0"
     exon            224..388
                     /gene="CLDN1"
                     /gene_synonym="Claudin-1"
                     /inference="alignment:Splign:2.1.0"
     exon            389..473
                     /gene="CLDN1"
                     /gene_synonym="Claudin-1"
                     /inference="alignment:Splign:2.1.0"
     exon            474..636
                     /gene="CLDN1"
                     /gene_synonym="Claudin-1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

atggccaacgcggggctgcagctgttgggctttatcctggccttcgtgggctggatcggcgctatcgtcagcaccgccttgccccagtggaagatctactcctatgccggcgacaacatcgtcacggcccaggccatctacgagggactgtggatgtcctgcgtgtcgcagagcaccgggcagatccagtgcaaagtcttcgactctttgctgaatctgaacagtactttgcaagcaacccgtgctttgatggtagttggcatcttgctgggactcatagcgatctttgtggccacgattggcatgaaatgcatgaagtgcatggaagacgatgaggttcagaagatgcggatggctgtctttgggggcatgatatttctcattgcaggtctggtgattttagtagccactgcatggtatagccacagaatagttcaagagttctatgaccccatgaccccagtcaatgccaggtatgagtttggtcaggctcttttcactggctgggctgctgcttctctgtgccttctgggaggtgccctactttgctgctcttgtccccgaaaaacaagctcttacccaacaccacggccctatccaaaacctgcaccttccagcgggaaagactacgtgtga

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