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Previous release (v1)
2026-09-16 21:34:57, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS NM_001257872 10198 bp mRNA linear PRI 29-DEC-2025 DEFINITION Macaca mulatta dicer 1, ribonuclease III (DICER1), mRNA. ACCESSION NM_001257872 XM_001100868 VERSION NM_001257872.1 KEYWORDS RefSeq. SOURCE Macaca mulatta (Rhesus monkey) ORGANISM Macaca mulatta Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca. REFERENCE 1 (bases 1 to 10198) AUTHORS Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Marcais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA and Norgren RB Jr. TITLE A new rhesus macaque assembly and annotation for next-generation sequencing analyses JOURNAL Biol. Direct 9 (1), 20 (2014) PUBMED 25319552 REMARK Publication Status: Online-Only COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JU333682.1. On Apr 12, 2012 this sequence version replaced XM_001100868.2. ##Evidence-Data-START## Transcript exon combination :: JU333680.1, JU333682.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN30957720 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..10198 /organism="Macaca mulatta" /mol_type="mRNA" /db_xref="taxon:9544" /chromosome="7" /map="7" gene 1..10198 /gene="DICER1" /note="dicer 1, ribonuclease III" /db_xref="GeneID:702516" /db_xref="VGNC:VGNC:71638" exon 1..39 /gene="DICER1" /inference="alignment:Splign:2.1.0" exon 40..140 /gene="DICER1" /inference="alignment:Splign:2.1.0" exon 141..329 /gene="DICER1" /inference="alignment:Splign:2.1.0" misc_feature 183..185 /gene="DICER1" /note="upstream in-frame stop codon" CDS 186..5948 /gene="DICER1" /EC_number="3.1.26.3" /codon_start=1 /product="endoribonuclease Dicer" /protein_id="NP_001244801.1" /db_xref="GeneID:702516" /db_xref="VGNC:VGNC:71638" /translation="
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIMKLCENCPACPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALNFINDCNISVHSKERDSTLISKQILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIMLADTDKMKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIDPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFMLSLQMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEARIGIPSTKYTKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGVGVRSLPADFRYPNLDFGWKKSIDSKSFISISNSSSAENDNYCKHSTIVPENAAHQGANRTSSLENHDQMSVNCRTLLSESPGKLHVEVSADLTAINGLSYNQNLANGSYDLANRDFCQGNQLNYYKQEIPVQPTTSYSIQNLYNYENQPSDECTLLSNKYLDGNANKSTSDGSPMMAVMPGTTDAIQVLKGRMDSEQSPSIGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSNTDKWEKDEMTKDCMLANGKLDEDYEEEDEEEESLMWRAPKEEADYEDDFLEYDQEHIRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMPFSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVSCAAASMASSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPNS"
misc_feature 309..902
/gene="DICER1"
/note="DEXH-box helicase domain of endoribonuclease Dicer;
Region: DEXHc_dicer; cd18034"
/db_xref="CDD:350792"
misc_feature order(309..320,327..329,378..401,522..524,711..713,
804..806)
/gene="DICER1"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:350792"
misc_feature order(486..491,558..563,636..638,642..647,654..656,
729..737)
/gene="DICER1"
/note="nucleic acid binding site [nucleotide binding];
other site"
/db_xref="CDD:350792"
misc_feature 996..1280
/gene="DICER1"
/note="Partner-binding domain of the endoribonuclease
Dicer; Region: Dicer_PBD; cd15903"
/db_xref="CDD:277191"
misc_feature order(1011..1016,1023..1025,1029..1034,1209..1214,
1221..1226,1233..1235,1242..1247,1254..1256)
/gene="DICER1"
/note="Trbp binding interface [polypeptide binding]; other
site"
/db_xref="CDD:277191"
misc_feature 1299..1877
/gene="DICER1"
/note="C-terminal helicase domain of the endoribonuclease
Dicer; Region: SF2_C_dicer; cd18802"
/db_xref="CDD:350189"
misc_feature order(1530..1538,1746..1748,1803..1805,1809..1811)
/gene="DICER1"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:350189"
misc_feature order(1758..1760,1764..1766,1839..1841,1845..1847)
/gene="DICER1"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:350189"
misc_feature 2073..2339
/gene="DICER1"
/note="Dicer dimerization domain; Region: Dicer_dimer;
pfam03368"
/db_xref="CDD:460900"
misc_feature 2841..3209
/gene="DICER1"
/note="PAZ domain, dicer_like subfamily. Dicer is an RNAse
involved in cleaving dsRNA in the RNA interference
pathway. It generates dsRNAs which are approximately 20 bp
long (siRNAs), which in turn target hydrolysis of
homologous RNAs. PAZ domains are named...; Region:
PAZ_dicer_like; cd02843"
/db_xref="CDD:239209"
misc_feature order(3030..3032,3069..3071,3087..3089,3099..3101,
3153..3155,3177..3179,3183..3185)
/gene="DICER1"
/note="nucleic acid-binding interface [nucleotide
binding]; other site"
/db_xref="CDD:239209"
misc_feature 4065..>4340
/gene="DICER1"
/note="Ribonuclease III family; Region: RIBOc; smart00535"
/db_xref="CDD:197778"
misc_feature order(4116..4121,4128..4133,4140..4142,4149..4154,
4161..4166,4170..4178,4206..4208)
/gene="DICER1"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238333"
misc_feature 5223..5717
/gene="DICER1"
/note="Ribonuclease III C terminal domain. This group
consists of eukaryotic, bacterial and archeal ribonuclease
III (RNAse III) proteins. RNAse III is a double stranded
RNA-specific endonuclease. Prokaryotic RNAse III is
important in post-transcriptional...; Region: RIBOc;
cd00593"
/db_xref="CDD:238333"
misc_feature order(5283..5288,5295..5300,5307..5309,5316..5321,
5328..5333,5337..5345,5373..5375,5637..5639,5670..5672)
/gene="DICER1"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238333"
misc_feature order(5283..5285,5292..5294,5304..5306,5607..5609,
5616..5618)
/gene="DICER1"
/note="active site"
/db_xref="CDD:238333"
misc_feature order(5292..5294,5607..5609,5616..5618)
/gene="DICER1"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:238333"
misc_feature 5730..5918
/gene="DICER1"
/note="double-stranded RNA binding motif of
endoribonuclease Dicer and similar proteins; Region:
DSRM_DICER; cd10843"
/db_xref="CDD:380680"
misc_feature order(5730..5735,5739..5744,5751..5756,5763..5768,
5778..5780,5793..5801,5805..5807,5811..5813,5862..5873,
5880..5882)
/gene="DICER1"
/note="putative RNA binding site [nucleotide binding];
other site"
/db_xref="CDD:380680"
exon 330..492
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 493..623
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 624..758
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 759..919
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 920..1088
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 1089..1561
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 1562..1694
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 1695..1937
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 1938..2092
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 2093..2225
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 2226..2301
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 2302..2441
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 2442..2621
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 2622..2835
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 2836..2989
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 2990..3172
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 3173..3278
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 3279..3454
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 3455..4229
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 4230..4385
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 4386..5274
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 5275..5543
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 5544..5706
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 5707..5782
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
exon 5783..10198
/gene="DICER1"
/inference="alignment:Splign:2.1.0"
ORIGIN
cttggaaactctgaaagaacttagaatcagcattttgagagcagaagcttgggcatgctgtgattttccaataaactgctatcacaatgtcaaaatgcagttcagacaacagcaacacagagatctcaaacattaaaacgtaagctgtgctagaacaaaaatgcaatgaaagaaacactggatgaatgaaaagccctgctttgcaacccctcagcatggcaggcctgcagctcatgacccctgcttcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataacatttatacgccaagaaaatatcaggttgaactgctcgaagcagctctggatcataataccatcgtctgtttaaacactggctcagggaagacatttattgcagtactactcactaaagagctgtcctatcagatcaggggagacttcaacagaaatggaaaaaggacggtgttcttggtcaactctgcaaaccaggttgctcaacaagtgtcagctgtcagaactcattcagatctcaaggttggggaatactcaaacctagaagtaaatgcatcttggacaaaagagagatggaaccaagagtttactaagcaccaggttcttattatgacttgctatgtcgccttgaatgttttgaaaaatggttacttatcactgtcagacattaaccttttggtgtttgatgagtgtcatcttgcaatcctagaccacccctatcgagaaattatgaagctctgtgaaaattgtccagcatgtcctcgcatattgggactaactgcttccattttaaatgggaaatgtgatccagaggaattggaagaaaagattcagaaactagagaaaattcttaagagtaatgctgaaactgcaacggacctggtggtcttagacaggtatacttctcagccatgtgagattgtggtggattgtggaccatttactgacagaagtgggctttatgaaagactgctgatggaattagaagaagcacttaattttatcaatgattgtaatatatctgtacattcaaaagaaagagattctactttaatttcaaaacagatactatcagactgtcgtgccgtattggtagttctgggaccctggtgtgcagataaagtggctggaatgatggtaagagaactacagaaatacatcaaacatgagcaagaggagctgcacaggaaatttttattgtttacagacactttcctaaggaaaatacatgcactatgtgaagagcacttctcacctgcctcacttgacctgaaatttgtaactcctaaagtaatcaaactgctcgaaatcttacgcaaatataaaccatatgagcgacagcagtttgaaagtgttgagtggtataataataggaatcaggataattatgtgtcatggagtgattctgaggatgatgatgaggatgaagaaattgaagaaaaagagaagccagagacaaattttccttctccttttaccaacattttatgtggaattatttttgtggaaagaagatacacagcagttgtcttaaacagattgataaaggaagctggcaaacaagatcctgagctggcttatatcagtagcaattttataactggacatggcattgggaagaatcagcctcgcaacaagcagatggaagcagaattcagaaaacaggaagaggtacttaggaaatttcgagcacatgagaccaacctgcttattgcaacaagtattgtagaagagggtgttgatataccaaaatgcaacttggtggttcgttttgatttgcccacagaatatcgatcctatgttcaatctaaaggaagagcaagggcacccatctctaattatataatgttagcagatacagacaaaatgaaaagttttgaagaagaccttaaaacctacaaagctattgaaaagatcttgagaaacaagtgttccaagtcggttgatactggtgagactgacattgatcctgtcgtggatgatgatgacgttttcccaccatatgtgttgaggcctgacgatggtggtccacgagtcacaatcaacacggccattggacacatcaatagatactgtgctagattaccaagtgatccgtttactcatctagctcctaaatgcagaacccgagagttgcctgatggtacattttattcaactctttacctgccaattaactcacctcttcgagcctccattgttggtccaccaatgagctgtgtacgattggctgaaagagttgtagctctcatttgctgtgagaaactgcacaaaattggggaactggatgaccatttgatgccagttgggaaagagactgttaaatatgaagaagagcttgatttgcatgatgaagaagagaccagtgttccaggaaggccaggttccacgaaacgaaggcagtgctacccaaaagcaattccagagtgtttgagggatagttatcccaaacctgatcagccctgttacctgtatgtgataggaatggttttaactacacctttacctgatgaactcaactttagaaggcggaagctctaccctcctgaagataccacaagatgctttggaatactgacagccaaacccatacctcagattccacattttcctgtgtacacacgctctggagaggttaccatatccattgagttgaagaagtctggtttcatgttgtctctacaaatgcttgagttgattacaagacttcaccagtatatattctcacatattcttcggcttgaaaaacctgcactagaatttaaacctacagacgctgattcagcatactgtgttctacctcttaatgttgttaatgactccagcactttggatattgactttaaattcatggaagatattgagaagtctgaagctcgcataggcattcccagtacaaaatatacaaaagaaacaccctttgtttttaaattagaagattaccaagatgcagttatcattccaagatatcgtaattttgatcagcctcatcgattttatgtagctgatgtgtacactgatcttaccccactcagtaaatttccttcccctgagtatgaaacttttgcagaatattataaaacaaagtataaccttgacctaaccaatctcaaccagccactgctggatgtggaccatacatcttcaagacttaatcttttgacacctcgacatttgaatcagaaggggaaagctcttcctttaagcagtgctgagaagaggaaagccaaatgggaaagtctgcagaataaacagatactggttccagaactctgtgctatacatccgattccagcatcactgtggagaaaagcagtttgtctccccagcatcctttatcgccttcactgccttttgactgcagaggagctgagagcccagactgccagcgatgctggcgtgggagtcagatcacttcctgcggattttagataccctaacttagacttcgggtggaaaaaatctatcgacagcaaatctttcatctcaatttctaactcctcttcagcggaaaatgataattactgtaagcacagcacaattgtccctgaaaatgctgcacatcaaggtgctaatagaacctcctctctagaaaatcatgaccaaatgtctgtgaactgcagaacgttgctcagcgagtcccctggtaagctccatgttgaagtttcagcagatcttacagcaattaatggtctttcttacaatcaaaatctcgccaatggcagttatgacttagctaacagagacttttgccaaggaaatcagctgaattactataagcaggaaatacccgtgcaaccaactacctcatattccattcagaatttatacaattatgagaaccagcccagcgatgaatgtactctcctgagtaataaataccttgatggaaatgctaacaaatctacctcagatggaagtcccatgatggccgtaatgcctggtacgacagacgctattcaagtgctcaagggcaggatggattctgagcagagcccttctattgggtactcctcaaggactcttggccccaatcctggacttattcttcaggctttgactctgtcaaacgctagtgatggatttaacctggagcggcttgaaatgcttggcgactcctttttaaagcatgccatcaccacgtatctgttttgcacttaccctgatgctcatgagggccgcctttcatatatgagaagcaaaaaggtcagcaactgtaatctgtatcgccttggaaaaaagaagggactgcccagccgcatggtggtgtcaatatttgatccccctgtaaactggcttcctcctggttatgtagtaaatcaagacaaaagcaacacagataaatgggaaaaagatgaaatgacaaaagactgcatgctggcgaatggtaaactggatgaggactacgaggaggaggatgaggaggaagagagcctgatgtggagggctccgaaggaagaggctgactatgaagatgatttcctggagtatgatcaggaacatatcagatttatagataatatgttaatggggtcaggagcttttgtaaagaaaatctctctttctcctttttcaaccactgattctgcatatgaatggaaaatgcccaaaaaatcctccttaggtagtatgccattttcatcagattttgaggattttgactacagctcttgggatgcaatgtgctatctggatcctagcaaagctgttgaagaagatgactttgtggtggggttctggaatccatcagaagaaaactgtggtgttgacacgggaaagcagtccatttcttacgacttgcacactgagcagtgtattgctgacaaaagcatagcggactgtgtggaagccctgctgggctgctatttaaccagctgtggggagagggctgctcagcttttcctctgttcactggggctgaaggtgctcccggtaattaaaaggactgatcgggaaaaggccctgtgccctactcgg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tctgctgtaaatagtgaaggaaaattactaaattcaagtaaaactaatgcatataatttgattgacaataaaatatttaccatcacatgctgcagctgtttttaaggaacatgatgtcattcattcatacagtaatcatgctgcagaaatgtgcagtctgcaccttatggatcacaattaccttgagttgtttttttt
//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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