2024-04-25 15:35:23, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001169063 1008 bp mRNA linear PRI 23-AUG-2020 DEFINITION Papio anubis homeobox A1 (HOXA1), mRNA. ACCESSION NM_001169063 VERSION NM_001169063.1 KEYWORDS RefSeq. SOURCE Papio anubis (olive baboon) ORGANISM Papio anubis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio. COMMENT INFERRED REFSEQ: This record is predicted by genome sequence analysis and is not yet supported by experimental evidence. The reference sequence was derived from DP000507.1. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN00000303, SAMN02045697 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..1008 /organism="Papio anubis" /mol_type="mRNA" /db_xref="taxon:9555" /chromosome="4" /map="4" gene 1..1008 /gene="HOXA1" /note="homeobox A1" /db_xref="GeneID:100137568" CDS 1..1008 /gene="HOXA1" /codon_start=1 /product="homeobox protein Hox-A1" /protein_id="NP_001162534.1" /db_xref="GeneID:100137568" /translation="
MDNARMNSFLEYPILSSGDSGTCSARAYPSDHGITTFQSCAVSTNSCGGDDRFLVGRGVQIGSPHQHHHHHHHHPQPATYQTSGNLGVSYSHSSCGPSYGSQNFSAPYSPYALNQEADVSGGYPQCAPAVYSGNLSSPMVQHHHHHQGYAGGAVGSPQYIHHSYGQEHQSLALATYNNSLSPLHASHQEACRSPASETSSPAQTFDWMKVKRNPPKTGKVGEYGYLGQPNAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLLPISPATPPGNDEKAEESSEKSSASPCVPSPGSSTSDTLTTSH"
misc_feature 526..>858 /gene="HOXA1" /note="Homeodomain-containing transcription factor [Transcription]; Region: COG5576" /db_xref="CDD:227863" misc_feature order(697..702,706..708,757..759,775..777,814..816, 820..825,832..837,841..849,853..858) /gene="HOXA1" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature 697..855 /gene="HOXA1" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(703..705,823..825,832..837,844..846) /gene="HOXA1" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" exon 1..652 /gene="HOXA1" /inference="alignment:Splign:2.1.0" exon 653..1008 /gene="HOXA1" /inference="alignment:Splign:2.1.0" ORIGIN
atggacaatgcaagaatgaactccttcctggaataccccatccttagcagtggcgactcggggacctgctcagcccgagcctacccctcggaccatgggattacaactttccagtcgtgcgcggtcagtaccaacagctgcggcggcgacgaccgcttcctagtgggcaggggggtgcagatcggttcgcctcaccaacaccaccaccaccaccatcaccacccccagccggctacctaccagacttccgggaacctgggggtgtcctactctcactcgagttgtggtccaagctatggctcacagaacttcagtgcgccttacagcccctacgcgttaaatcaggaagcagacgtaagtggtgggtacccccagtgcgctcccgctgtttactctggaaatctctcatctcccatggtccagcatcaccaccaccaccagggttatgccgggggcgcggtgggctcgcctcagtacattcaccactcatatggacaagagcaccaaagcctggccctggctacgtataataactccttgtcccctctccacgccagccaccaagaagcctgtcgctcccctgcatcggagacatcttctccagcgcagacttttgactggatgaaagtcaaaagaaaccctcccaaaacagggaaagttggagagtatggctacctgggtcaacccaacgcggtgcgcaccaacttcactaccaagcagctcacggagctggagaaggagttccacttcaacaagtacctgacgcgcgcccgcagggtggagatcgctgcatccctgcagcttaacgagacccaagtgaagatctggttccagaaccgccgaatgaagcaaaagaaacgtgagaaggagggtctcttgcccatctctccagccaccccgccaggaaacgacgagaaggccgaggaatcctcagagaagtccagcgcttcgccctgcgttccttccccggggtcttctacctcagacactctgactacctcccactaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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