2024-03-29 15:26:28, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001161647 1178 bp mRNA linear MAM 19-FEB-2022 DEFINITION Sus scrofa claudin 9 (CLDN9), mRNA. ACCESSION NM_001161647 VERSION NM_001161647.1 KEYWORDS RefSeq. SOURCE Sus scrofa (pig) ORGANISM Sus scrofa Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus. COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from FJ873107.1. ##Evidence-Data-START## Transcript is intronless :: FJ873107.1, SRR5120058.7464.1 [ECO:0000345] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..1178 /organism="Sus scrofa" /mol_type="mRNA" /db_xref="taxon:9823" /chromosome="3" /map="3" gene 1..1178 /gene="CLDN9" /note="claudin 9" /db_xref="GeneID:100302022" /db_xref="VGNC:VGNC:86741" exon 1..1178 /gene="CLDN9" /inference="alignment:Splign:2.1.0" misc_feature 194..196 /gene="CLDN9" /note="upstream in-frame stop codon" CDS 209..862 /gene="CLDN9" /codon_start=1 /product="claudin-9" /protein_id="NP_001155119.1" /db_xref="GeneID:100302022" /db_xref="VGNC:VGNC:86741" /translation="
MASAGLELLGMSLAVLGWLGTLVCCALPLWKVTAFIGNSIVVAQVVWEGLWMSCAVQSTGQMQCKVYDSLLALPQDLQAARALCVVALLLALLGLLVAITGAQCTTCVEDEGAKARIVLTAGVVLLLSGILVLIPVCWTAHAIIQDFYNPLVAEALKRELGASLYLGWAASALLMLGGGLLCCTCPPPQIDRPRGPRLGYSIPSRSGASGLDKRDYV"
misc_feature 221..724 /gene="CLDN9" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" ORIGIN
attcagcggagcaggactcgagattgattttcttgccgagggtcgagacacatctgcgaggggtgcggagcgaggcgtgaggactcttggtcagaggacgctggctcccgctcctgctgggcaccgagacccccgcccagcacatctgacccgcttctcaggatccaccaggcctcccagagctgggaggatctagccgaggcggcccatggcttcagctggccttgagctcctgggcatgagcctggctgtgctgggctggctggggaccctggtgtgctgcgccctgcccctgtggaaggtgaccgccttcatcggcaacagcatcgtggtggcccaggtggtctgggaggggctgtggatgtcctgcgcggtgcagagcacaggccagatgcagtgcaaggtgtacgactcgctgctggcactgccccaggacctgcaggcggcccgcgccctctgcgtcgtcgccctcctgctggccctgctcggcctgctggtggccatcacgggcgcccagtgcaccacctgcgtggaggacgaaggcgccaaggcccgcattgtgctcacggcgggggtggtcctcctcctgtcgggcatcttggtgctgatccccgtgtgctggacggcgcacgccatcatccaggacttctacaaccccctggtggccgaggccctcaagcgggagctgggagcctccctctacctcggctgggcggcgtctgccctgctcatgctgggcgggggcctcctctgctgcacatgccccccgccccagatcgaccggccccggggaccgaggctgggctactctatcccctcccgctcgggcgcgtctgggctggacaagagggactatgtgtgaggtgcgtgtccccggaagcctgctgctcagaacctcgaccttgtgcccgatgccctcctctcacccgtgccttctccggtcagccccccgcccccatcccaggtgagacccactttccagatgcttgagccgggcctggttgcatcgaaaccctcctcagcggggtccccacctccccccaggcagggtacccgggcctgcccagcacccccaggttgcttttttctaatgtccaggattcaggatggcttcatccagacggcagtggcttctcatgccctccccaacctggagttctgtattcgtcccctctggc
//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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