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2021-01-24 06:28:19, GGRNA.v2 : RefSeq release 203 (Nov, 2020)

LOCUS       NM_001133960            3502 bp    mRNA    linear   PRI 27-JUN-2020
DEFINITION  Pongo abelii claudin 12 (CLDN12), mRNA.
ACCESSION   NM_001133960
VERSION     NM_001133960.1
KEYWORDS    RefSeq.
SOURCE      Pongo abelii (Sumatran orangutan)
  ORGANISM  Pongo abelii
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Pongo.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CR859386.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CR859386.1, CR557419.1 [ECO:0000332]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..3502
                     /organism="Pongo abelii"
                     /mol_type="mRNA"
                     /db_xref="taxon:9601"
                     /chromosome="7"
                     /map="7"
     gene            1..3502
                     /gene="CLDN12"
                     /gene_synonym="Claudin-12"
                     /note="claudin 12"
                     /db_xref="GeneID:100174503"
     misc_feature    181..183
                     /gene="CLDN12"
                     /gene_synonym="Claudin-12"
                     /note="upstream in-frame stop codon"
     CDS             208..942
                     /gene="CLDN12"
                     /gene_synonym="Claudin-12"
                     /codon_start=1
                     /product="claudin-12"
                     /protein_id="NP_001127432.1"
                     /db_xref="GeneID:100174503"
                     /translation="
MGCRDVHAATVLSFLCGIASVAGLFAGTLLPNWRKLRLITFNRNEKNLTVYTGLWVKCARYDGSSDCLMYDTTWYSSVDQLDLRVLQFALPLSMLIAMGALLLCLIGMCNTAFRSSVPNIKLAKCLVNSAGCHLVAGLLFFLAGTVSLSPSIWVIFYNIHLNKKFEPVFSFDYAVYVTIASAGGLFMTSLILFIWYCTCKSLPSPFWQPLYSHPPSMHTYSQPYSARSRLSAIEIDIPVVSHTT"
     misc_feature    238..300
                     /gene="CLDN12"
                     /gene_synonym="Claudin-12"
                     /note="propagated from UniProtKB/Swiss-Prot (Q5R9K1.1);
                     transmembrane region"
     misc_feature    469..531
                     /gene="CLDN12"
                     /gene_synonym="Claudin-12"
                     /note="propagated from UniProtKB/Swiss-Prot (Q5R9K1.1);
                     transmembrane region"
     misc_feature    613..675
                     /gene="CLDN12"
                     /gene_synonym="Claudin-12"
                     /note="propagated from UniProtKB/Swiss-Prot (Q5R9K1.1);
                     transmembrane region"
     misc_feature    730..792
                     /gene="CLDN12"
                     /gene_synonym="Claudin-12"
                     /note="propagated from UniProtKB/Swiss-Prot (Q5R9K1.1);
                     transmembrane region"
     misc_feature    889..891
                     /gene="CLDN12"
                     /gene_synonym="Claudin-12"
                     /note="Phosphoserine.
                     /evidence=ECO:0000250|UniProtKB:P56749; propagated from
                     UniProtKB/Swiss-Prot (Q5R9K1.1); phosphorylation site"
     misc_feature    898..900
                     /gene="CLDN12"
                     /gene_synonym="Claudin-12"
                     /note="Phosphoserine.
                     /evidence=ECO:0000250|UniProtKB:P56749; propagated from
                     UniProtKB/Swiss-Prot (Q5R9K1.1); phosphorylation site"
ORIGIN      
ggcacttcctgggacgctgagagggagacgctccaagaggctcctcagtgtgggcgagtaaaatgccctgcgtgtgagaagcaggctcagattattgctactctgtattcagatctgcatgtgtttcttctaagctgaataaagctgttttggaactgtcaggtacctcaaaggtctgactgacagcactccgcaagcttgcctgccatgggctgtcgggatgtccacgcagccacagtcctttccttcctgtgtggaatcgcctcagtagcaggcctctttgcagggactctgcttcccaactggagaaaattacgattgatcacattcaacagaaacgagaagaacctgactgtttacacaggcctgtgggtgaaatgtgcccggtatgacgggagcagtgactgcctgatgtacgacactacttggtactcatcagttgaccagctggacctgcgtgtcctccagtttgccctacccctcagcatgctgatcgccatgggtgccctgctgctgtgcctgattggaatgtgcaacactgccttcaggtcctcagtgcccaacatcaaactggccaagtgtctggtcaatagtgcaggttgccacctggtggctgggctgctgtttttcctggcaggtactgtgagcctctcgccatctatctgggtcatcttttataacatccatctgaacaagaagtttgagccagtcttttcatttgactatgcagtgtatgtcactattgctagtgctgggggcctgtttatgacttcccttatactgtttatttggtattgtacatgcaaatctttgccttctcctttctggcaaccattgtactcccatccacccagtatgcatacttactcacagccctattcagcacgctctcgcctctctgccattgaaattgacattccggtagtttcacacaccacttaatggggaaatagttaattgttaaagaaaacttcttgtagcctcacattccccttgtgcaaagagctcttttggacctacatacattttcctttgtttttgaccaatcaatgaagccaaatttgtatgtcctagtagaatgaagtgctgctagtttttatgagaagtacattatattaaatgtgaatttttttaattttgcttcttatactggaaggaattttagccttcatattgatatctaattaattatttaagtggaagaggcctgcatcacaattgaggtaatttagagcaacatgttaaagaatgatggttagcagaagctgttgcataccatcttcatgaatatttcagtgtgtatttttctttttctataatacctttaactgcaaagaaaaggcagtttcagatataagaaatttatttcaggtaagggtaatattttaatagtagtcaataatctagcttaaggctgtaactcttctcttggggctaattgtatgaataggtgtcagtatgttgaagattactttcttttgtgactttcttctacctcatgccagtgtttaaaagtaaaatgtattttaaatgatgttagaataagactaccattctaaatatcacctacttatgaataacatgtaataatttttaacattaatgattccataaattgtattattggggttagaatgtgctttatgacaggttagtatttcctctgaggcagaaaactcttttttggagatattatccatcaagcagtactcgtgcccatatgcaatctcttagtggctaagagaaataaataaaagggccataatggtttgttctctttcagacataatttagtaggggacaagaagtctgttcttcagtgactacactagagatttactctggtgactgccttttgagttatgggtgaagtaaggtatggctttaccataaccttgattcattcacccttgatgcatttctcgcccccatcactgattatttccttgagcatatatttttgcctaactaacactttagtaggtgctatagaggatacatgaaaagtatgagatctggtcccatccagtaagacattttaatagagaagatcaaaatgttacctgacagttggggaataatctgacttcattgtcagttggccttaacttcttaatcattgatccaggaatatttcaaccagagacacaagtttctgtcagacagacaaattgtacaacaccaacaatatcctggaccttgaaattctgtttacttcagtccattgtatccttaaggcacctgtgctagcctagattttgtaataacactgatttatgagaatgggcaaaagtggtagggaaattgttccctctccacttctgaaagtatgatgatgtattaaggatggaggagttattaaaaatgtctcttctgatgaggtaacaattagatgaaaccatgttaaaactgagatgaacacttagaaattcagggatattgggtcgttagccttatgaatttgagctgcttatttaattggtgtaatttgctacatattagtactatattcataaggatttttttattaaccattgcagattttacaaacagctagttatatggtaaacagattattatgcctttttgcaattctgaatatgattctagtatttgtgtggatgtatttggtactttttcccctaattccaacactagtttatatatagagcaaataaatctagttgtataaatttttaaatgccgtcagtagaaagcacacaaggttatgatttttttaattactggcttctgatttctttcacttctgatccttttcgtttttctcagatgtagctgagtcttgatcattttaagacaacgatgggtagaattttgagattaatattaattttttccctttttgttaatttcagtcccctctcactatgcttttgtccagaaggatcaagaattctaccatcccttgggtctttgtgtataaacaatgttaaataaaggtagactcagtctttaacatattagacagttttttagtccatgggattgtaaatataaacattaactttcctataagaatcttttggctttgtaatctatagccccaaattggtatttattatggattcactagacaaacagctgtttccttattgtcttttttctttagtgtttctgatttgctatcagtagctatttttaaagccatcaaaggaaaataattatttacagtttttgaagtcacttttgagccctcatcaagctctcattgtgatgggagggatacctttttgttgttaaaagcctattattgttgaaggccttttatggaaaccaacttggaaaacaaccttaaacgtggatgtatcagatttggtttatccagccgtgggagagaaaacaaacctaagtttactttacttgtacatatacactataatggatagtatatttgctgtaaactacaatgtaaaacctcaataaaagtgcactgtacttcttaatgtttattaaaagatgtatttttacaaaaaaaaaaaaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]