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2020-03-31 04:50:17, GGRNA.v2 : RefSeq release 99 (Mar, 2020)

LOCUS       NM_001092351            1060 bp    mRNA    linear   VRT 28-OCT-2016
DEFINITION  Xenopus laevis claudin 5 (transmembrane protein deleted in
            velocardiofacial syndrome) S homeolog (cldn5.S), mRNA.
ACCESSION   NM_001092351
VERSION     NM_001092351.1
KEYWORDS    RefSeq.
SOURCE      Xenopus laevis (African clawed frog)
  ORGANISM  Xenopus laevis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae;
            Xenopus; Xenopus.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW and
            Richardson P.
  TITLE     Genetic and genomic tools for Xenopus research: The NIH Xenopus
            initiative
  JOURNAL   Dev. Dyn. 225 (4), 384-391 (2002)
   PUBMED   12454917
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC073390.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC073390.1 [ECO:0000332]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Xenopus laevis"
                     /mol_type="mRNA"
                     /db_xref="taxon:8355"
                     /chromosome="1S"
     gene            1..1060
                     /gene="cldn5.S"
                     /gene_synonym="claudin-5"
                     /note="claudin 5 (transmembrane protein deleted in
                     velocardiofacial syndrome) S homeolog"
                     /db_xref="GeneID:444247"
                     /db_xref="Xenbase:XB-GENE-17332561"
     misc_feature    153..155
                     /gene="cldn5.S"
                     /gene_synonym="claudin-5"
                     /note="upstream in-frame stop codon"
     CDS             168..818
                     /gene="cldn5.S"
                     /gene_synonym="claudin-5"
                     /codon_start=1
                     /product="claudin 5 (transmembrane protein deleted in
                     velocardiofacial syndrome) S homeolog"
                     /protein_id="NP_001085820.1"
                     /db_xref="GeneID:444247"
                     /db_xref="Xenbase:XB-GENE-17332561"
                     /translation="
MASVGMEILGLSLSTLGWVGVILACGLPMWQVSAFIENNIVVAQIIWEGLWMTCVVQSTGQMQCKVYDSILALSPELQAGRALTVLASMVGLIGLLVTVVGAKCTNCLHGSSVKGRVLLAGGIIYILCGILVLIPLCWIANIIITEFYDPRVPAPQKREMGAALYVGWAATSLLMLGGSLLCGSFAMKDGISNLPVKYSAPRMPTSNGDYDKKNYV"
     misc_feature    180..677
                     /gene="cldn5.S"
                     /gene_synonym="claudin-5"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:304458"
ORIGIN      
gaaggagcaaaggagagagtggggggagctggtggtaccacagaaagggaagctccggcacaggaaaacacttatccagttgtctacttgggccacagagtgaaaactaaagaagctccagagaagcagcaggtcgcacttacaattagccgtgagcaagtgtggaaatggcatcggtaggaatggagatcctgggtctgtcgctgagcaccctgggctgggtgggggtgatcctggcatgcgggctccccatgtggcaagtgtcagccttcatagagaataacatcgtggtggcgcagattatctgggaaggtctgtggatgacttgcgtggtgcaaagtacggggcagatgcagtgcaaagtctacgactccatcctcgcccttagccctgagctccaggctggcagagccctcactgtactggcctctatggtggggctcattgggctactggtcaccgtggtgggcgctaagtgcaccaactgcctgcatgggagcagcgtgaagggccgggtgctgctcgccggggggatcatctacattctctgcgggatcctggtgctcatcccgctctgctggatcgccaatatcatcattaccgagttctacgaccctcgggtgccggccccccaaaagcgagagatgggggccgctttgtatgtaggatgggcggccacttccctgctcatgcttgggggctccctcctgtgcggctcgttcgctatgaaagatggaatcagcaacctgcccgtcaagtactccgccccccgcatgcccacctctaacggggactatgacaaaaagaactatgtgtaataggggaggggtcgcagggaacacgagatcttacccactgctggactgtgacctgtacatacagtaaattggctcttccctccggcagtaacttcccccgtgcgggttcagacacttaccgacctggtgagcagcttcttctgtcaactggtacccagtcagctgtgttccatggacttgccagcgaccccgtccggttgggttcattacagatgaccagcaatgtaaaaaaaaaaaaaaaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]