LOCUS       NM_001081481             873 bp    mRNA    linear   PRI 21-JUN-2021
DEFINITION  Pan troglodytes homeobox D8 (HOXD8), mRNA.
ACCESSION   NM_001081481 XM_515929
VERSION     NM_001081481.1
KEYWORDS    RefSeq.
SOURCE      Pan troglodytes (chimpanzee)
  ORGANISM  Pan troglodytes
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Pan.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from DQ977370.1.
            
            On Feb 10, 2007 this sequence version replaced XM_515929.2.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN01120800,
                              SAMN01120804 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Pan troglodytes"
                     /mol_type="mRNA"
                     /db_xref="taxon:9598"
                     /chromosome="2B"
                     /map="2B"
     gene            1..873
                     /gene="HOXD8"
                     /note="homeobox D8"
                     /db_xref="GeneID:459763"
                     /db_xref="VGNC:VGNC:1967"
     CDS             1..873
                     /gene="HOXD8"
                     /codon_start=1
                     /product="homeobox protein Hox-D8"
                     /protein_id="NP_001074950.1"
                     /db_xref="GeneID:459763"
                     /db_xref="VGNC:VGNC:1967"
                     /translation="

MSSYFVNPLYSKYKAAAAAAAAAGEAINPTYYDCHFVPEVGGRHAAAAAALQLYGNSAAGFPHAPPQAHAHPHPSPPPSGTGCGGRDGRGQEYFHPGGGSPAAAYQAAPPPPPHPPPPPPPPPCGGIACHGEPAKFYGYDNLQRQPIFTTQQEAELVQYPDCKSSSGNIGEDPDHLNQSSSPSQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKENNKDKFPVSRQEVKDGETKKEAQELEEDRAEGLTN"

     misc_feature    178..381
                     /gene="HOXD8"
                     /note="propagated from UniProtKB/Swiss-Prot (A2T748.1);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    421..>774
                     /gene="HOXD8"
                     /note="Homeodomain-containing transcription factor
                     [Transcription]; Region: COG5576"
                     /db_xref="CDD:227863"
     misc_feature    481..603
                     /gene="HOXD8"
                     /note="propagated from UniProtKB/Swiss-Prot (A2T748.1);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    order(592..606,610..612,661..663,679..681,718..720,
                     724..729,736..741,745..753,757..762)
                     /gene="HOXD8"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     misc_feature    order(598..600,607..609,727..729,736..741,748..750)
                     /gene="HOXD8"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
     misc_feature    601..759
                     /gene="HOXD8"
                     /note="Homeobox domain; Region: Homeobox; pfam00046"
                     /db_xref="CDD:425441"
     misc_feature    763..870
                     /gene="HOXD8"
                     /note="propagated from UniProtKB/Swiss-Prot (A2T748.1);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     exon            1..577
                     /gene="HOXD8"
                     /inference="alignment:Splign:2.1.0"
     exon            578..873
                     /gene="HOXD8"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

atgagttcgtacttcgtgaacccgctgtactccaagtacaaggcggcggctgcggcggcggcggcggcgggcgaggccatcaatcccacttactacgactgtcacttcgtgcccgaggtcggcggccgtcacgccgccgccgcagcagccctgcagctctatggcaacagcgccgccggcttcccgcacgcgcccccgcaggcgcacgcgcacccgcacccgtccccgccgccctccgggactgggtgcggcggtagggatggccggggccaggagtacttccaccccggcgggggcagcccggccgctgcctaccaggccgccccccctcctcctccgcatcctccgcctccgccgccacctcccccctgcggcgggattgcctgtcacggggagcccgcgaagttttacggatacgataacttacagagacagccgatttttacgacccagcaagaggccgagctggtacaatatcctgactgtaaatcgtccagtggtaatattggcgaggacccagaccacttaaatcagagctcgtctccttctcaaatgtttccgtggatgagaccacaagcagctcctggtagacgaagaggaagacaaacctacagtcgcttccaaactctagagttggaaaaggaatttctttttaacccctatctgaccaggaaaagaagaatcgaggtttcccacgccctagccctcaccgagagacaggtaaaaatctggttccagaacaggagaatgaaatggaaaaaggaaaacaacaaggacaaatttcccgtttcccggcaggaggtgaaggacggggaaacgaaaaaggaagcccaagagctggaggaagacagagccgaaggcctgacaaattaa

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