2024-04-19 23:14:39, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001037774 2285 bp mRNA linear ROD 21-MAR-2023 DEFINITION Rattus norvegicus claudin 8 (Cldn8), mRNA. ACCESSION NM_001037774 XM_221709 VERSION NM_001037774.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 2285) AUTHORS Molina-Jijon E, Rodriguez-Munoz R, Gonzalez-Ramirez R, Namorado-Tonix C, Pedraza-Chaverri J and Reyes JL. TITLE Aldosterone signaling regulates the over-expression of claudin-4 and -8 at the distal nephron from type 1 diabetic rats JOURNAL PLoS One 12 (5), e0177362 (2017) PUBMED 28493961 REMARK GeneRIF: the participation of aldosterone (ALD), and the effect of spironolactone (SPL), a mineralocorticoid receptor antagonist, on the expressions of claudin-2, -4, -5 and -8, and occludin in glomeruli, proximal and distal tubules isolated from diabetic rats, was evaluated. Publication Status: Online-Only REFERENCE 2 (bases 1 to 2285) AUTHORS Krause G, Winkler L, Mueller SL, Haseloff RF, Piontek J and Blasig IE. TITLE Structure and function of claudins JOURNAL Biochim Biophys Acta 1778 (3), 631-645 (2008) PUBMED 18036336 REMARK Review article REFERENCE 3 (bases 1 to 2285) AUTHORS Fujita H, Chiba H, Yokozaki H, Sakai N, Sugimoto K, Wada T, Kojima T, Yamashita T and Sawada N. TITLE Differential expression and subcellular localization of claudin-7, -8, -12, -13, and -15 along the mouse intestine JOURNAL J Histochem Cytochem 54 (8), 933-944 (2006) PUBMED 16651389 REFERENCE 4 (bases 1 to 2285) AUTHORS Hu YH, Warnatz HJ, Vanhecke D, Wagner F, Fiebitz A, Thamm S, Kahlem P, Lehrach H, Yaspo ML and Janitz M. TITLE Cell array-based intracellular localization screening reveals novel functional features of human chromosome 21 proteins JOURNAL BMC Genomics 7, 155 (2006) PUBMED 16780588 REMARK Publication Status: Online-Only REFERENCE 5 (bases 1 to 2285) AUTHORS Ohta H, Adachi H and Inaba M. TITLE Developmental changes in the expression of tight junction protein claudins in murine metanephroi and embryonic kidneys JOURNAL J Vet Med Sci 68 (2), 149-155 (2006) PUBMED 16520537 REFERENCE 6 (bases 1 to 2285) AUTHORS Morita K, Furuse M, Fujimoto K and Tsukita S. TITLE Claudin multigene family encoding four-transmembrane domain protein components of tight junction strands JOURNAL Proc Natl Acad Sci U S A 96 (2), 511-516 (1999) PUBMED 9892664 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC099804.1. On Dec 16, 2005 this sequence version replaced XM_221709.3. ##Evidence-Data-START## Transcript is intronless :: BC099804.1, DN932765.1 [ECO:0000345] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..2285 /organism="Rattus norvegicus" /mol_type="mRNA" /db_xref="taxon:10116" /chromosome="11" /map="11q11" gene 1..2285 /gene="Cldn8" /note="claudin 8" /db_xref="GeneID:304124" /db_xref="RGD:1308575" exon 1..2250 /gene="Cldn8" /inference="alignment:Splign:2.1.0" CDS 3..680 /gene="Cldn8" /codon_start=1 /product="claudin-8" /protein_id="NP_001032863.1" /db_xref="GeneID:304124" /db_xref="RGD:1308575" /translation="
MATYALQMAALVLGGVGMVGTVAVTIMPQWRVSAFIESNIVVFENRWEGLWMNCMRHANIRMQCKVYDSLLALSPDLQASRGLMCAASVLSFLAFMTAILGMKCTRCTGEDENVKSRILLTAGIIFFITGLVVLIPVSWVANAIIRDFYNPLVDVAQKRELGEALYIGWTTALVLIAGGALFCCVFCCTERSNSYKYSVPSHRTTQRSFHAEKRSPSIYSKSQYV"
misc_feature 15..548 /gene="Cldn8" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" ORIGIN
ccatggcaacctacgctcttcaaatggctgccctggtgcttggtggtgttggcatggtgggcacagtggctgtgacgatcatgcctcagtggagagtgtctgccttcatcgaaagtaacattgtcgtgtttgagaaccgctgggaaggtttgtggatgaactgcatgaggcatgccaacatcagaatgcagtgtaaggtctatgactccctgctggctcttagtccagacctccaggcatccagaggactgatgtgtgctgcgtccgtcctgtccttcttggctttcatgacagccatcctcggaatgaagtgcaccaggtgcaccggggaggacgagaacgtgaagagccgcatcttgctgacggctggaatcatcttcttcatcaccggcttggttgtgctcatccctgtcagctgggttgccaatgccatcatcagagacttctacaacccgctggtggatgtggcccaaaagcgcgagcttggtgaagccctctacataggctggaccacggcgctggtgctgatcgctggaggagcactgttctgttgcgtgttttgctgtactgaaaggagtaacagttacaagtactcggtaccatcccatcgcaccactcagaggagtttccacgccgaaaagagatccccgagcatatactccaaaagtcagtatgtgtagctgtgtgtgtatattttagctgtagctataaagcgaagctttataaatcactgaaccagccactattttatagaaatggaacccacagtgtttccatttacctttcttaactgcctcgtactcattacaggaaatacgcagcgtctatgattccataaatgattttagcagaatgaggtattatgcacactgcttcaattgttccagaaagcatagccatttgttttctaaaatggttcacgcggttcttcttttatcagtcactctaagacgacccatcgaaagactgttggtttaagctgcgatttctctgtgtcatggcattatacaagtaatgcgagtggcagttatagctcacacaaatagagacaggcttatgtggttctatttaaagtgaaatgccaatccatcaggctgaataaacagaactcagctattgcatttcaggggacctggggataaaaggaaagaaggctgatattaattgcctaaaaacagcttaaggattagtgcactctatttatagcaaaggttaaaatgaaggctttcatcattagtgtaagggaaactgaatggctttctgatcgcctgctttgcagcctccaggagttaaaaatcctgtcacctttatcctttatccacgtgccttttttttttctgattgtgttccttagtatcttttaaagtttaaagcagatattgtaacaaaatattttttttcttcagactacgtttgtaaggctgggctaacaagagagataaagcagtggtcttagaaaaattaacgttttcagaaaaatgactttaccttagcctttctctttagagaagaatgtattgtttttaaaatgaagtcacatcatataaaaggggccgttcaagtgctatttgtgcatacctttttgggaatttttctgtataaataagagaggaaaaagaatattttgtcatttacttaccccaaagaggtacaatccctccaaatccaaaaacttgtcctctttcaactcttgtcattcaatcaaagttgtcatttctgttctgttggaggtgatttcctctttttctatgtctttgctaagttttattaaagtgtggtatcactgtgtgtttcctcctaatttgagacaactattaaggtaataccaaatttcatatatatgacttttatattggtaaattgtatcttttataacaatatagcatttcttacatttacattctttttcattactttgcacaagtgtttaaaacttggcattgacaatttatgtttgaacatagatttcgtgttcattttttctggtgcggtgtaggatttaaatcaatttactttataatgacctgactcatgcattaatatttgattaatatattaataatactaagttctacttaggtccagtgaaatgtgtttgctgtaaatattgtgtatgtaatcatatttttaaaagttgtccatatgtatttcaacttctgagaattcgtttgaattaaaaacaaagctgaatgatttgggagtatgcaccatatttatgtgaagtatattattaaaactttgcaatactaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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