GGRNA ver.2 Help | Advanced search | Japanese    Previous release (v1)

2024-04-25 23:36:35, GGRNA : RefSeq release 222 (Jan, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

PREDICTED: Crassostrea virginica CUB and sushi domain-containing protein 2-like (LOC111104980), mRNA. (2194 bp)
ORIGIN // cgcaaacttaaccaatgtcaaggtcacttccactagcatcgggacgactctttcttacacatgtcattggaataaatcaatgaccttgaactcaacatgcaaagctgatggtacctggacatcttcggcttccgtttgccctaccggcccaccagaatgccctgttgatcaccctgacgcaaacttaaccaatgtcaaggtcacttccactagcatcgggacgactctttcttacacatgtcattggaataaatcaatgaccttgaactcaacatgcaaagctgatggtacctggacatcttcggcttccgtttgccctaccggcccaccagaatgccctgttgatcaccctgacgcaaacttaaccaatgtcaaggtcacttccactagcatcgggacgactctttcttacacatgtcattggaataaatcaatgaccttgaactcaacatgcaaagctgatggtacctggacatcttcggcttccgtttgccctaccggcccaccagaatgccctgttgatcaccctgacgcaaacttaaccaatgtcaaggtcacttccactagcatcgggacgactctttcttaca...
position 82
XM_022439157.1 - Crassostrea virginica (eastern oyster) - NCBI
Trichoderma virens Gv29-8 uncharacterized protein (TRIVIDRAFT_222554), partial mRNA. (615 bp)
K.S. and Kubicek,C.P. TITLE Direct Submission JOURNAL Submitted (05-JUL-2007) DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA atgaagttcaactccgctgctattgtagccatcttggcctacaccaccttagctctgccaacgccatccccaggcaaaaccgatgttggcaaagttgatcttgagagccgaaatggcaagatggatgtcggcaaggttgaccttgaacgacgaaacggcaagatggatgttggcaaggttgatcttgaacgtcgaaacggcaagatggatgtcggcaaagttgatcttgagcgtcgaaacggcaagatggatgtcggcaaggttgaccttgaacgacgaaacggcaagatggatgtcggcaaggttgaccttgaacgacgaaacggcaagatggatgtcggcaaggttgaccttgaacgtcgaaacggcaagatggatgttggcaaggttgatcttgaacgtcgaaatggtaagatggatgttggcaaggttgatcttgaacgac...
position 139
XM_014100710.1 - Trichoderma virens Gv29-8 - NCBI
PREDICTED: Dreissena polymorpha uncharacterized LOC127858672 (LOC127858672), mRNA. (5239 bp)
ctgatgaaggaaagaaaaaacaagtgcatgtggcttggagagttgatgaaaaaaaagcactgtacagtgccttcgggcaatatttaaatggcacaagaggtctgcctggaaaaggagagatttttacagcacaaaccaaatttagtattctccaaaacagatcatggttgaacattaaatatcagttgaaaaatatgctaaagaaaaataagtgaattattctttgagaccatgaacaatgttatgttgtatattaattgatactttgaaaagtgttctgttgtgcattaattgagaccttgaacagtgttcatttgtgtattaattgagaccttgaacagtgctcatttgtgtattaattgagaccttgaacagtgctcatttgtgtattgagaccttgaacagtgctcatttgtgtattaattgagaccttgaacagtgctcatttgtgtattaattgagaccttgaacagtgctcatttgtgtattaattgagaccttgaacagtgttcagttgtgtattaattgagaccttgaactgtgctcatttgtgtattaattgagaccttgaacagtgctcatttgtgtattaattgagac...
position 1185
XM_052395875.1 - Dreissena polymorpha - NCBI
PREDICTED: Dreissena polymorpha uncharacterized LOC127871587 (LOC127871587), mRNA. (8396 bp)
ctgatgaaggaaagaaaaaacaagtgcatgtggcttggagagttgatgaaaaaaaagcactgtacagtgccttcgggcaatatttaaatggcacaagaggtctgcctggaaaaggagagatttttacagcacaaaccaaatttagtattctccaaaacagatcatggttgaacataaaatatcagttgaaaaatatgctaaagaaaaataagtgaattattctttgagaccatgaacaatgttatgttgtatattaattgatactttgaaaagtgttctgttgtgcattaattgagaccttgaacagtgttcatttgtgtattaattgagaccttgaacagtgctcatttgtgtattaattgagaccttgaacagtgctcatttgtgtattgagaccttgaacagtgctcatttgtgtattaattgagaccttgaacagtgctcatttgtgtattaattgagaccttgaacagtgctcatttgtgtattaattgagaccttgaacagtgttcagttgtgtattaattgagaccttgaactgtgctcatttgtgtattaattgagaccttgaacagtgctcatttgtgtattaattgagac...
position 3907
XM_052414661.1 - Dreissena polymorpha - NCBI
PREDICTED: Physella acuta uncharacterized LOC131944972 (LOC131944972), mRNA. (2863 bp)
tgccacctccgagaggcttgagatctctgtgctgatagaggaagaggaggatgataaagtagaggatgataaagtagaggatgataaagtagaggatgataaagttgataaagagggcgagaggttggatggggaggtaactgaagaatggcaagatgagacgatgcagggaggtaggaaggagagcaagaaaacagaggaggcaccagaagaaggaggaagtcaaccatccgtgacaggacacattcaaactgatgagcttgaccaagtcattaaatacgacgataatgaagctgaccttgaactagatcaacaggggacaaatggagctgaccttgaactagatcaactaggaacaaatgaagctgaccttgaactagatcaacaggggacaaatgaagctgaccttgaactagatcaacaggggacaaatgaagctgaccttgaactagatcaacaggggacaaatgaagctgaccttgaattagatcaacaggggacaaatgaagctgaccttgaactagatcaacaaggaaaaaatgaagctgaccttgaactagatcaacaggggacaaatgaagctgaccttgaactagatca...
position 1931
XM_059305895.1 - Physella acuta - NCBI
PREDICTED: Rana temporaria uncharacterized LOC120946061 (LOC120946061), ncRNA. (1457 bp)
cagggacatggcccgagactagaacacagggacatggcccgagactagaacacagggacatggcccgagactagaacacaggggcatggcctgagactagaacacaggggcatggcctgagactagaacacaggggcatggcctgagactagaacacaggggcatggcctgagactagaacacaggggcatggcctgagactagaacacaggggcatggcccgagactagaacacaggggcatggcctgagactagaacaaaggggcatggcctgagactagaacacggggacatgaccttgaactagaacacggggacatgaccttgaactagaacacggggacatgaccttgaactaaaacacggggacatgaccttgaactagaacacggggacatgaccttgaactagaacacggggacatgaccttgaactagcacacggggacatgacttgagactagaaaacgaggacatgacctga
position 1269
XR_005750643.1 - Rana temporaria (common frog) - NCBI
PREDICTED: Sphaeramia orbicularis flocculation protein FLO11-like (LOC115420685), mRNA. (1911 bp)
taaccacacatcgctgctcctgccgttgtgtgttcatgtgaggttgtgtttgtgagttggtgtgtgtgtgtgtgagtgtgtgtgtgtgttgtgtgtcatcagccccacccatcatgtccccaaacccatcgacgctccacccacgtccatcagtgtgttttctcctcctcctgctcctgctcaccccctcctcctgcacgtcagcccggaaagacccgctccagcccagccccgagaccacagaccagaaccaggctgaggccgagacctgggaccggagccagagcgagactgagaccttgaaccagagccagggtgagactgagacccagacccagaaccagggccagagccagagtgagactgagaaccagaaccagagccagggtgagactgagacccagaaccagaaccacagccagagcgagactgagaccttgaaccagagccagactgagaccttgaaccagagccagactgagaccttgaaccagagccagactgagacctttaaccagagccagagtgagactgagaccttgaaccagagccagagtgagactgagaccttgaaccagagccaaaatgagactgaggccc...
position 372
XM_030136129.1 - Sphaeramia orbicularis (orbiculate cardinalfish) - NCBI
PREDICTED: Eriocheir sinensis uncharacterized LOC127004858 (LOC127004858), ncRNA. (1289 bp)
cattctgccaactcatgggtatgcgtgcccccggggaacctcgcctgtgctgggctgccccggggaggctgcgggggcgcctgtcacgcctaaaacaccgtggcaaaagtctgtctgtctgtgtttgtttggctgggtggcaccaagttggggaccttggacttggtgtttggccttccttggcggggtagcagagggaaaggtcattaaaacacagtgattaaaggtcgggacaccacacacggcagtcttgaccataattattatacgtaaggcaaggtttgaagggagtggagaccttgaacttgtttggccttccttggcgggttagcagagggaaaggtcattaaaacacagtgattaaaggtcgagacaccacacacggcagtcttgatcttaattattgtacgtaaggcaaggtttgaagggagtggagaccttgaacttatttggccttccttggcgggctagcagagggaaaggtcattaaaacacagtgattaaaggtcaggacaccacacacggcagtcttgaccttggttattctacgtaaggcaaggtttgaagggagtggagaccttgaacttatttggccttctt...
position 696
XR_007758067.1 - Eriocheir sinensis (Chinese mitten crab) - NCBI
PREDICTED: Pecten maximus caspase-3-like (LOC117323380), transcript variant X2, mRNA. (3288 bp)
cactactccatcgcttaggctgtaatgcagtactatcttccaggtaatcattgtcaatacgtatgcagtcaaacactgttgctcattctctatatatttttattgtggttttggtttgtattgtaatgaagaagagtaatagagtatttcacagtgttcttctagttatccatccaagctgtcttgcccgctgacagattctttccgtgtcatgcaggtattcggtctagatatactttgaacatgtcaggacggaccttaaacctgtcagtatatgtttccctcggcgtagacggaccttgaacttgtcagtatgtcagtttccatcggtttagacaaaccttgaacttgtcagtatatatgtttccatcggccaagacggaccttgaacttgtcagtatgtcagtttccatcggccaagacggaccttgaacctgtcagtatgtcagtttccatcagtctagacggaccttgaacctgtcaatatatgtttccctcggactagacggaccttgaacttgtccgtatatgtgtttcactcggtctagacaaaccttgaacctgtccgtatatgtgtttccctcggtctagataaacctt...
position 2317
XM_033878572.1 - Pecten maximus - NCBI
PREDICTED: Dreissena polymorpha transmembrane protein 256 homolog (LOC127836600), transcript variant X2, misc_RNA. (1706 bp)
gttgcaatggctgcatacggagctcatgcttttaaccatgaagggaatgaagaagaacaaaaacttaagaatgtatttgagtcaggaaacaagatgcatctgtttcactcggtggcaatgatggctgtaccactgacaaggaatcctaacttggtcggttgcacgatggcaacagggatgctgatattctccgggagctgttactaccaggcaataacaaaagacggccgcatccgaaagattacgccctatggaggcatgcttctcatcatctcatggctccttatgatcctgtgaccttgaacaataatctgtgaccttgaactttggtgttttcatggctccttaagatcctgtgaccttgaacattggcatatttatagctcctttagatcctgtgaccttgaacttcagtgttttcatgtctccttaagatcctgtgacaatgaactttggtgtatttatagctcctttagatcctgtgacaatgaactttggtgtatttatggctccttatgattctgtttccttaataatattatcctttagtcgaaatttggtattttcttcatggcttcttcttatcatttgaccttgatt...
position 602
XR_008028836.1 - Dreissena polymorpha - NCBI
PREDICTED: Dreissena polymorpha transmembrane protein 256 homolog (LOC127836600), transcript variant X1, mRNA. (1790 bp)
gttgcaatggctgcatacggagctcatgcttttaaccatgaagggaatgaagaagaacaaaaacttaagaatgtatttgagtcaggaaacaagatgcatctgtttcactcggtggcaatgatggctgtaccactgacaaggaatcctaacttggtcggttgcacgatggcaacagggatgctgatattctccgggagctgttactaccaggcaataacaaaagacggccgcatccgaaagattacgccctatggaggcatgcttctcatcatctcatggctccttatgatcctgtgaccttgaacaataatctgtgaccttgaactttggtgttttcatggctccttaagatcctgtgactttgaactttggtgttttcatggctccttaagatcctgttactttgaactttggtgttttcatgtctccttaaaaacctgtgaccttgaacattggcatatttatagctcctttagatcctgtgaccttgaacttcagtgttttcatgtctccttaagatcctgtgacaatgaactttggtgtatttatagctcctttagatcctgtgacaatgaactttggtgtatttatggctcctta...
position 602
XM_052363270.1 - Dreissena polymorpha - NCBI
PREDICTED: Pecten maximus caspase-3-like (LOC117323380), transcript variant X1, mRNA. (3515 bp)
cactactccatcgcttaggctgtaatgcagtactatcttccaggtaatcattgtcaatacgtatgcagtcaaacactgttgctcattctctatatatttttattgtggttttggtttgtattgtaatgaagaagagtaatagagtatttcacagtgttcttctagttatccatccaagctgtcttgcccgctgacagattctttccgtgtcatgcaggtattcggtctagatatactttgaacatgtcaggacggaccttaaacctgtcagtatatgtttccctcggcgtagacggaccttgaacttgtcagtatgtcagtttccatcggtttagacaaaccttgaacttgtcagtatatatgtttccatcggccaagacggaccttgaacttgtcagtatgtcagtttccatcggccaagacggaccttgaacctgtcagtatgtcagtttccatcagtctagacggaccttgaacctgtcaatatatgtttccctcggactagacggaccttgaacttgtccgtatatgtgtttcactcggtctagacaaaccttgaacctgtccgtatatgtgtttccctcggtctagataaacctt...
position 2544
XM_033878563.1 - Pecten maximus - NCBI
Cutaneotrichosporon cavernicola uncharacterized protein (CcaverHIS019_0400210), partial mRNA. (1503 bp)
agtacggcaagagtgttggttcatttatcacggccaccaatgcgcgtcctagctcgacttcgcccaagccgcagaaacagtacggaacagctcatgcggtgcctccaaccaccgttcatacaatccatgccccaccgcccagcacgtacggtccgcccgcgcctaacaactgcacgaacgtgtatcagacgccgtacaaccagaaccaaccgggccagagccagtaccagcagccttatctgcagcagccggggttcaacgtggccccgccaaaccagttcaactcgccgccgcagaccttgaacacctcgcctcctctgcagttcaactcgccgccgcagaccttgaacacctcgcctcctctgcagttcaactcgccgccgcagaccttgaacacctcgcctcctcagcagttcaactcgccaccgcagaccttgaacagctcgcctcctctgcagttcaactcgccgccgaaccagttcgctccgcccccgaaccagaaccaacccagtttcccgccgcccacgcagaaccagaaccagggcttgtcccctcctccaccgaaaccgagcctcctcagcaaccctagtttcacgcagg...
position 411
XM_060599809.1 - Cutaneotrichosporon cavernicola - NCBI
PREDICTED: Diaphorina citri uncharacterized LOC113467646 (LOC113467646), mRNA. (459 bp)
db_xref="GeneID:113467646" /translation="MSDEEEETVTDDVTAVTVKDGSKMCGYLEKKGKLGVTGRWRSWYCVLDGHLLLQYKSQSEYLSLSPCRGSINLALAKSIEKRPRLEIHIATRSQVILLVPQ" misc_feature 163..393 /gene="LOC113467646" /note="Pleckstrin homology domain; Region: PH; smart00233" /db_xref="CDD:214574" ORIGIN // tcaggttccacagtgaccttgaactttgaccaaaatcaaagcaccaatcacaaggccgtacaatatccaaagcaccaatcagaaggctggaaaatgtccgacgaggaagaagagacggttactgatgacgtcacagcagttacggttaaagatggcagcaaaatgtgtggctatctggagaagaagggaaaactgggtgtcaccggtcgctggcgcagttggtactgcgtgctagacggccacctgctcctccagtacaagagccagtcggaatatctctcgctgtcaccctgtagggggtctataaatctggccctggcga...
position 15
XM_026823937.1 - Diaphorina citri (Asian citrus psyllid) - NCBI
PREDICTED: Teleopsis dalmanni uncharacterized protein PF11_0213-like (LOC119687384), mRNA. (435 bp)
PF11_0213-like" /protein_id="XP_037957601.1" /db_xref="GeneID:119687384" /translation="MYIRTSRFHDSREDHNDLEHLENLKDFEGLEDYEDYENHEYLEYFEVLEFLEDRGNLEVPKYHKNLEDLEKVEDLKHHEDFKNVNELKNLEKIEKYEDLEELEDINGLKYREDLEHLEDLKDVKVPKYHKDLEYIEDLEVDSLT" ORIGIN // atgtacatacgtacgtctcgattccatgacagtcgtgaagaccataacgaccttgaacatctcgagaacctcaaagattttgaaggccttgaagactatgaagactatgaaaaccatgaatatctcgaatactttgaagttcttgaattccttgaagaccgtggaaaccttgaagtccctaaataccataaaaaccttgaagaccttgaaaaagttgaagatcttaaacaccatgaagattttaaaaacgttaatgaacttaaaaaccttgaaaaaattgaaaaatatgaagatcttgaagagcttgaagacattaatggccttaaatatcgtgaagaccttgaacacctcgaagac...
position 49
XM_038101673.1 - Teleopsis dalmanni (Cyrtodiopsis dalmanii) - NCBI
PREDICTED: Branchiostoma belcheri uncharacterized LOC109481402 (LOC109481402), ncRNA. (394 bp)
by RNAseq alignments, including 2 samples with support for all annotated introns" /db_xref="GeneID:109481402" ncRNA 1..394 /ncRNA_class="lncRNA" /gene="LOC109481402" /product="uncharacterized LOC109481402" /db_xref="GeneID:109481402" ORIGIN // agaaccgagattcgaatgcagacgaccggacgcgatgaaatttaggggtgaccttgaacagtttgtgatcatggcacaagaacatggaggcgccatcattctgtcacgtttcctttcgtcacacaagcaagtttagaggtgaccttgaacagttcacaagaacctgaagggcgccttgattcatggattcatgcacgctttcgttcatcacaagcaatgaagtttagaagtgatcacaagaaacatggaggatggagggcgccatcactaagtcattttttttcaccaccgaagagcaatgaagtttagaggtgaccttgaagtcaaaaacacaacaaccaagaagggcatcatca...
position 50
XR_002140896.1 - Branchiostoma belcheri (Belcher's lancelet) - NCBI
Trichomonas vaginalis G3 A-type inclusion protein-related family (TVAGG3_0358090), partial mRNA. (1613 bp)
New York University, 12 Waverly Place, New York, NY 10003, USA gaaatcaagaacatcaattcacatatcaacgaaaagaattcaaagaactcagaaactgacaagaagaacaaagatcttgaacaagagttgaatgataagaaagctcaacttgaatccattccaaccgttgaagacaaatcatccgaactcgaaaacgaaatcaagaacatcaattcacatatcaatgacaagaattcaaagaactcagaaaccgatcataagaacaaggaccttgaacaagagttgaatgataagaagtctcaacttgaatccattccaaccgttgaagacaaatcatccgaactcgaaaacgaaatcaagaacatcaattcacatatcaacgaaaagaattcaaagaactcagaaactgacaagaagaacaaagatcttgaacaagagttgaatgataagaaagctcaacttgaatctattccaaccgttgaagacaaatcatccgaactcgaaaacgaaatcaagaacatcaattcacatatcaacgaaaagaattcaaagaactcagaaactgacaagaagaac...
position 229
XM_051231372.1 - Trichomonas vaginalis G3 - NCBI
PREDICTED: Saccostrea echinata uncharacterized LOC133177149 (LOC133177149), transcript variant X1, ncRNA. (488 bp)
gene="LOC133177149" /product="uncharacterized LOC133177149, transcript variant X1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" /db_xref="GeneID:133177149" ORIGIN // aaactagaactgtccaaacgggacaaaataccccccgctgggtttttcagaagtacgtttttccataataaagatatgtatcaaacacaaattatgaattttttcttccagtgaccttgaacttccccaaatgaccttgggtcaaggtcatgacacacctttgggtcatgggcaatctttgtgtgaaatgagaacctaccaagtttttccataataaagatatgtatcaaacacgaattatgaaatttttcttccagtgaccttgaacttccccaaattaccttaagtcaaggtcatgacacacccttaggtcatgagcaatcttagtgtggagtagtagattctaatgtccctttgtaagaaagatatggaccggacacgattgcacagacagacggacagctagacagacggacaaacgga...
position 113
XR_009719613.1 - Saccostrea echinata - NCBI
PREDICTED: Saccostrea echinata uncharacterized LOC133177149 (LOC133177149), transcript variant X2, ncRNA. (492 bp)
gene="LOC133177149" /product="uncharacterized LOC133177149, transcript variant X2" /experiment="COORDINATES: polyA evidence [ECO:0006239]" /db_xref="GeneID:133177149" ORIGIN // aaactagaactgtccaaacgggacaaaataccccccgctgggtttttcagaagtacgtttttccataataaagatatgtatcaaacacaaattatgaattttttcttccagtgaccttgaacttccccaaatgaccttgggtcaaggtcatgacacacctttgggtcatgggcaatctttgtgtgaaatgagaacctaccaagtttttccataataaagatatgtatcaaacacgaattatgaaatttttcttccagtgaccttgaacttccccaaattaccttaagtcaaggtcatgacacacccttaggtcatgagcaatcttagtgtggagtagtagattctaatgtccctttgtaagaaagatatggaccggacacgattgcacagacagacggacagctagacagacggacaaacaga...
position 113
XR_009719614.1 - Saccostrea echinata - NCBI
PREDICTED: Eurytemora carolleeae band 7 protein AGAP004871 (LOC111696122), transcript variant X3, mRNA. (1247 bp)
gaaccaagaacctgggagatattctttcagaacgagaatcgatagctcaggaaatgcagtccacccttgatgaagctacagatccttggggagttcaggtagagagggtagaagtaaaggatgttcgtgttccagagcagcttcaacgggccatggcagcagaagctgaagcagcaagagaagctcgtgcaaaggtcatagctgcagaaggagaacataaagctagcagagctctgcggcatgcagcagaagttattgtagacagtccagctgcattacagttgagatacctgcagaccttgaacagtatatcttgtttagttaagatacctgcagaccttgaacagtatatcttgtttagttgagatacctgcagaccttgaacagtatatctta
position 1147
XM_023465671.1 - Eurytemora carolleeae - NCBI
Phytophthora parasitica INRA-310 hypothetical protein partial mRNA. (587 bp)
ctgcaagccactcgctggattttttcgctcctggctgccgccgctggtcgagctgatcccaagtctgaaccagagaccaagccaaagcccagcgacgcgaaggaggaagccgtatcgcgacgccacgaagaaatcaggtgtcgcgagctcattcgactgagcggtgcagcgacgggatctcttgggcggcttcgcttgaagcgcggcaaaaacgccggaagcgcgccacgctggacaacgatctcgtcgtcaagtccagcgcagcactacgaagacgagcagctccaggccgagcgaccttgaacggtggcttcatataggccggcaaggcctgcagcccacgttggcacatgggatatcatcgcgaagccgccagatcatgttcgatcacgacgccgcgtccatctcaccgcgacccgaccttgaaccaacccggcttctatagtacacgatatcggtgatcgcaggctcctactcctctcgcaggtcaccactcaatacaattcccctttcaactagtcttttgtagctatataatataacagacctattcgttttcgcagaga
position 317
XM_008903830.1 - Phytophthora parasitica INRA-310 - NCBI
Babesia microti strain RI partial mRNA. (2901 bp)
ctacgatgagaagatggataatttgcaaaagcagctgaaagaatacactgaaaagatcacagtgctggaaaacaacgcctctgaattcaactataaagaccaagctgaaacgttgaagacggaactggataagtcgcaactaaagataatggaactggagactatgattaaggagaacagcgaaaaaacggaaagagtgccatctcccagaaaggacaacgaggaggttgatagattaacttcggaaatattacagttgaagaatcaggtggacattctgcaaaatgaaaagactgaccttgaacaaaaattatcacaacaatctcccagaaaggacaacgaggaggttgatagattaacttcggaaatattacagttgaagaatcaggtggacattctgcaaaatgaaaagactgaccttgaacaaaaattatcacaacaatctcccagaaaggacaacgaggaagttgatagattaacttcggaaatattacagttgaagaatcaggtggacattctgcaaaatgaaaagactgaccttgaacaaaaattatcacaacaatctcccagaaaggacaacgaggaagttgatagattaac...
position 1867
XM_012794168.1 - Babesia microti strain RI - NCBI
PREDICTED: Diorhabda sublineata phosphatidylserine synthase (LOC130444247), mRNA. (4453 bp)
tttattttgacccttcttttccttaactaatgacataaaatcaaaatctatatttttcattattacagttttattaaattttataagggagcttgtaaaaatttataaaaatctcactttcaactttaacctcgtataatttccacaaatatgtaattggaataatcgaatttggtcactaatctaaaaccatctttcttctaactaatcccataatattcaaatcagcacccttactggtttcttagttatttgaaattatacgagagtgtgtgaaagtaagttataacattttgaccttgaacttcaacctcgtataatttccacaaataacaatttgaacaaactaattattatcctttattttgatccttcttttccctaactaatgacataaaatcgaaatctataactttccttgtttggaatttattccaatttatacgagagcatgtcaaaattagtctaaaaaaatttaccttgaacttcaacctcgtataatttctacaaatatttaattggaataatcgaatttggtcactaatctaaaagcatcttccctctaactaatctcataatattcaaatcagcacccttact...
position 1950
XM_056779310.1 - Diorhabda sublineata - NCBI
PREDICTED: Crassostrea virginica uncharacterized LOC111104979 (LOC111104979), mRNA. (1451 bp)
ORIGIN // ggaataaatcaatgaccttgaactcaacatgcaaagctgatggtacctggacatcttcggcttccgtttgccctaccggcccaccagaatgccctgttgatcaccctgacgcaaacttaaccaatgtcaaggtcacttccactagcatcgggacgactctttcttacacatgtcattggaataaatcaatgaccttgaactcaacatgcaaagctgatggtacctggacatcttcggcttccgtttgccctaccggcccaccagaatgccctgttgatcaccctgacgcaaacttaaccaatgtcaaggtcacttccactagcatcgggacgactctttcttacacatgtcattggaataaatcaatgaccttgaactcaacatgcaaagctgatggtacctggacatcttcggcttccgtttgccctaccggcccaccagaatgccctgttgatcaccctgacgcaaacttaaccaatgtcaaggtcacttccactagcatcgggacgactcttccctacacatgtcattggaatacatcaatgacattgaactcaacatgcaaggccgatggtacctggacatcttcg...
position 14
XM_022439156.1 - Crassostrea virginica (eastern oyster) - NCBI
PREDICTED: Dreissena polymorpha cytoplasmic dynein 2 light intermediate chain 1-like (LOC127873897), transcript variant X1, mRNA. (2781 bp)
tgttataatcagaactccaagataaatcttgttttatgagctgacatctgcattgtcctgtgatcaatgtatttattataattgtatactattattatgcctttcgaagaaaagggggcatatagtgatcagactgtccgtctgtctgtccgtctttccatcacactttgcgtttaggtttcgaaaaatgctcataacttctatgtcccttgagatataaccttcatatttggtatgcatctgtatatggacaaggcctttccatacgcacaattttttttacccctatgaccttgaccttgaacttagggtccacgtttaggtttcgaaatctgcgtttaggtttcaaaaaattctcataacttctatgtccctggagatgtaaccttcatatttggtatgcatgtgtatatggacaaggcctttcaatacgcacacaaatatttacccctgtgaccttgaccttgaacttagggtccgcgtttaggtttcgaaatctgcgtttaggtttcgaaaaatgctcataacttctgtctcttgagatataaccttcatatttggtatgcatgtgtatattgaccatgccttttcatacaccta...
position 1797
XM_052418003.1 - Dreissena polymorpha - NCBI
PREDICTED: Oncorhynchus nerka uncharacterized LOC115127581 (LOC115127581), ncRNA. (773 bp)
tcaactacacagtgggttgtaagcctcagagcgtgggtatgtctggagacgattacattaacaggctccatggcaacagcggcacgacaacatcaccaggcaacggttctgtggtcgccgaggcaggtcgtcataacaacgtgtcgtcggagtgtgtgtggagtgtcccggtgctccgtgaggaactagacgttctgtctgtccggttcactcccattaacggacctaatgtaacggtcacacacacacaccccacgctcctcacctaccccctcaacacacagtctactggagggaccttgaacctggagattacactcaacactgtgagtaacacacacacaccccacgctcctcacctaccccctcaacacacagtctactggagggaccttgaacctggagattacactcaacactactaatacaacgttaggaaacagcagtgtgatggcctgtctctcttcctgggctcctgtcctcgcactcaactactcccatccctgtca
position 560
XR_003863397.1 - Oncorhynchus nerka (sockeye salmon) - NCBI
PREDICTED: Nelumbo nucifera uncharacterized LOC104600355 (LOC104600355), transcript variant X1, ncRNA. (1498 bp)
atggatgtccagcaataaatgtctctgctttttgtctgatcagtgctggccattggtacgttgcccagcaaaaagtggatggggattgggaaattttgattttttgacaaatggttatgaagtatatatggaaagaaagtgtgaattaaggctctccatcacttcgaaacggtctcacctgtgtctctgtaattcgatcagtttgtttaatcagattcatctggagctctctacagaagctacaaccaacaagttaacagaaacaacttggccaaacccagtagttgcacagctggaccttgaaccctctaagaaaaaccaaatttttccggaggcatcagagatggtggaccaaaaggttcagtagcttgaccttgaaccctctaagaaaaaccaaattttgccggagacatcaaagatggtgggaccaaaaggttcagtagcttgaccttgaaccctctaggaaaaaccaaattttgtcggaggcatcagagatggtgggaccaaaagttctcagtagcagtaggttcatataggctgatcagaaaatccctaaaaatcttgcattaaaatcaaccagaagtcaatgtaatataaata...
position 1150
XR_002022815.1 - Nelumbo nucifera (sacred lotus) - NCBI
PREDICTED: Nelumbo nucifera uncharacterized LOC104600355 (LOC104600355), transcript variant X2, ncRNA. (1501 bp)
atggatgtccagcaataaatgtctctgctttttgtctgatcagtgctggccattggtacgttgcccagcaaaaagtggatggggattgggaaattttgattttttgacaaatggttatgaagtatatatggaaagaaagtgtgaattaaggctctccatcacttcgaaacggtctcacctgtgtctctgtaattcgatcagtttgtttaatcagattcatctggagctctctacagaagctacaaccaacaagttaacagaaacaacttggccaaacccagtagttgcacagctggaccttgaaccctctaagaaaaaccaaatttttccggaggcatcagagatggtggaccaaaaggttcagtagcttgaccttgaaccctctaagaaaaaccaaattttgccggagacatcaaagatggtgggaccaaaaggttcagtagcttgaccttgaaccctctaggaaaaaccaaattttgtcggaggcatcagagatggtgggaccaaaagttctcagtagcagtaggttcatataggctgatcagaaaatccctaaaaatcttgcattaaaatcaaccagaagtcaatgtaatataaata...
position 1153
XR_002022816.1 - Nelumbo nucifera (sacred lotus) - NCBI
PREDICTED: Ctenopharyngodon idella uncharacterized si:cabz01007794.1 (si:cabz01007794.1), transcript variant X3, mRNA. (3872 bp)
tggcatgcttgatgcttgcagtcaatggaacagatggtagcaactccacggcaagcaacagctcaatatcttctaacatgaccatgaacctgacccaaacaagccctcccaacattaccactaacctgaccatgacccaacctccagacataaacatgaacctgacccacacaagccctcccaacattaccactaacctgaccatgacccaacctccagacataaacatgaacctgacccaaacaagccctcccaacatcaccactaacctgaccatgaccccccctcccaacatgaccttgaacctgacccacacaagccctcccaacattaccactaacctgaccatgacccaccctccagacataaacatgaacctgacccacacaagccctcccaacatcaccaccaacctgaccatgacccttcctcccaacatgaccttaaacctgacccaaacaagccctcccaacattaccactaacctgaccatgacccagcctccagacataaacatgaacctgacccacacaagccctcccaacaacaccactaacatgaccatgaccccccctcccaacatgaccttgaacctgaccc...
position 333
XM_051900515.1 - Ctenopharyngodon idella (grass carp) - NCBI
PREDICTED: Ctenopharyngodon idella uncharacterized si:cabz01007794.1 (si:cabz01007794.1), transcript variant X2, mRNA. (3872 bp)
tggcatgcttgatgcttgcagtcaatggaacagatggtagcaactccacggcaagcaacagctcaatatcttctaacatgaccatgaacctgacccaaacaagccctcccaacattaccactaacctgaccatgacccaacctccagacataaacatgaacctgacccacacaagccctcccaacattaccactaacctgaccatgacccaacctccagacataaacatgaacctgacccaaacaagccctcccaacatcaccactaacctgaccatgaccccccctcccaacatgaccttgaacctgacccacacaagccctcccaacattaccactaacctgaccatgacccaccctccagacataaacatgaacctgacccacacaagccctcccaacatcaccaccaacctgaccatgacccttcctcccaacatgaccttaaacctgacccaaacaagccctcccaacattaccactaacctgaccatgacccagcctccagacataaacatgaacctgacccacacaagccctcccaacaacaccactaacatgaccatgaccccccctcccaacatgaccttgaacctgaccc...
position 333
XM_051900514.1 - Ctenopharyngodon idella (grass carp) - NCBI
PREDICTED: Oreochromis niloticus uncharacterized LOC102079679 (LOC102079679), ncRNA. (2462 bp)
acacgctttgcaaaatttgtccttcccatatctcatcactcagtctttaataatagaggacctaaatttcaccacatggtgctatccaaactccactggaggactccagtgtcagtgtgaggaccagtttgcttggtcatgtaacaagtgtgatgagtacggcgcatgcagtaatgtcacctcccaaacctgtgattgcataaagggatttcctctgagtggggagttctgtcaaccaatcacaggcgtcgctccttgcccaacaccaactcctgcaccagtggactttgatatagaccttgaactgcacatcccagcatctagtgtgccccaaaatttcagtgttgtgctcagaaatattctgagaaatttctccttccccaaaatcatcactgggtctttaacactgaaagacttgaacttcaccacatggtgctatccaaactccactggaggacaccagtgtcagtgtgaagaccagtttgcttggtcatgtggcaagtgtgataagtacggcgcatgcagtaatgtcacctcacaaacctgtgattgcataaagggatttcctctgagtggggagttctgtcaaccaatcacagg...
position 1293
XR_002057560.1 - Oreochromis niloticus (Nile tilapia) - NCBI
PREDICTED: Mus musculus predicted gene, 42009 (Gm42009), transcript variant X2, ncRNA. (645 bp)
tggcccaagtcttacagcctcagacttctgagaacgaaattttaaaaaacggcagtttaagttatgaaaagagggacgttgtcagtcagagtctattgggataggcctctttgcacatcttcattgagaatttctagaggcccttctgcctggaaccaagaagggagaaagcttgacagcactgaattgagcatcttttgtggcctgtgcttctccccacccagcaccccctcccccttgcccttgtctctcatgtagcacaggcaaaccttgagctccttatacaacagacggtgaccttgaactcccacttgcccttgtctctcatgtagcacaggcaaaccttgagctccttatacaacagacggtgaccttgaactcc
position 559
XR_878709.4 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
PREDICTED: Physeter catodon leucine-rich repeat-containing protein 37A3-like (LOC112063147), partial mRNA. (702 bp)
aaaacctgtggaacttgcacttatcgtaactccagcattcactaatgaggttgaaacttctccaccccaacaagaaaccttggctccgtttacagtgtcccctgagcagttggaaattttgtcggtccagcaagaggtttcagatcagcatccaaccccctctgaaaatgttgaaccttctccaatacagcagggagcccccactcaaccaacatacttcgaggttacatttccaaatccagagcaagttcaggctcagcatccaaccttgactgaggtcacaattcaacctttggaccttgaactgaccataaggccagaacccactaaggaaggtgaaccttctccatccatgcaggagaccttaacccagcctccagaaccacctaaggaggtttttgtagctcagcctccactatatcagaacccaatagttccaacaccagttcaggatcacactgagcctccaacatcacccagtgtcagagttcaacctttagaccagggacttaccacaactccagaacctactatggaggctgaacattccacacccctgcaggaggctatagttcctccaacacaccccgaggtgacact...
position 307
XM_024118053.2 - Physeter catodon (sperm whale) - NCBI
PREDICTED: Nasonia vitripennis uncharacterized LOC116416229 (LOC116416229), partial mRNA. (920 bp)
ccgtgactttgacctagacctcgactttgagctagaccgtgacttagaccttgactttgacttcgatatagaacgtgactttgaccttgactttgacttagatctagaacgtgacttagacgttgactttgactcagatcttgactttgactttgaccttgtctttgacttagacctagaacgtgactttgactttgaccttgtctttgacttagacctagaacgtgacttagaccttgattttgacgaaaatcttgagaggtcgaaagacacaccaccaacgatacttgaaattgaccttgaacgtgacttagatctagatcgtgacttagacctagagcgtgaattacacctggaccgtgacttagagctagaccgtgattttgtcctagaccgtgattttgaccttgaccgtgaattagacctagaccgtgactttgacctagacctcgactttgacctagaccgtgactttgagctagaccgtgacttagaccttgactttgacttcgatatagaacgtgactttgaccttgactttgacttagatctagaacgtgacttagacgttgactttgactcagatcttgactttgactt...
position 351
XM_031923907.1 - Nasonia vitripennis (jewel wasp) - NCBI
PREDICTED: Denticeps clupeoides uncharacterized LOC114766686 (LOC114766686), ncRNA. (926 bp)
db_xref="GeneID:114766686" ncRNA 1..926 /ncRNA_class="lncRNA" /gene="LOC114766686" /product="uncharacterized LOC114766686" /db_xref="GeneID:114766686" ORIGIN // acaagtactaaacacctctgggaactccttcaagactgttggaaaagcatttcagctacctgatgaatccagttttacagaacagcccttggtctccagacctaaggactacaaccgtcttcttcaactctcgaccttgaaccaaaagagtcgtttactggggaagatccagctaatacaccccccctcctctacccaaagtactgatgttctctcagctacctgatgaatccagttttacagaacagcccttggtctccagacctaaggactacaaccgtcttcttcaactctcgaccttgaaccaaaagagtcgtttactggggaagatccagctaatacaccccccctcctctacccaaagtactgatgttctctcaggtaagcttcacacctgactcacctgacccagtttacatctaaggacatacacacggaa...
position 133
XR_003742845.1 - Denticeps clupeoides (denticle herring) - NCBI
PREDICTED: Meriones unguiculatus uncharacterized LOC132646862 (LOC132646862), transcript variant X2, ncRNA. (852 bp)
gtttggctgtgtgcatgtggccagacagaatgccacaagccctggagctgagttttaggtgcttatgagacatcccacatgggtgctggggactgaactggggttcttcggaaaagcattaaggattctttgccgctgagctgtctcaccagcttccggagatgatcccttgtggagacaccggtcttcctgagtagttggaaagcagattcgatcccggacctcatccgcctaggcctgagccagaatacccttctcactcaggtcttcctactcatccagcaatgaggatgaccttgaactcttgactgtctcgactctaccttctaagtcttttacagtctctgcaggtactcacatgtacacacatgtacacacacagacacagtaaaacaaagtaaaaataccagactcattgtcacaggccggcaatcctagcactccagaggtggagtcaagagaatgggaagttcagggactcctgtgaggacataattaatgaatttgaggccagtctgggctacatgaaattctgtctcaaactataacaacacaagatatgcggttatactgtgctggttaagtttttggtgcctcgac...
position 293
XR_009585202.1 - Meriones unguiculatus (Mongolian gerbil) - NCBI
Mycena indigotica uncharacterized protein (MIND_01421000), partial mRNA. (951 bp)
JOURNAL Submitted (13-MAY-2020) Biodiversity Research Center, Academia Sinica, 128 Academia Road, Section 2, Nankang, Taipei 11529, Taiwan atgggtcgctttcccccggagcttgagcaggccatcctcaaaatgtgcgctgaggatgactggagtttcatccccacacttctccgcgtcgctcagcgcacacatatatggctcgaacctctcctgtaccaacatgtctatatcagcaccgaccttgaacgaaagcccgcgcaagacgctttcttccatgtcgctgttgcccgcccacaatcatttctcgcaaaaagtgtgcgtgtggtggtgcttgaactggcccattctggaacaccagctcaagaccttttggagcgcacctacaatgcgttgcggtcctgcactgggatccaggaattcgccgtgaatggtgctgacaaaatggacattggcccaagattatttccaatcttggccaccatgccgcttcgccgccttggggcttttctcgaaaatctcatgccgcacccgatcttcatgaaagacca...
position 151
XM_037370597.1 - Mycena indigotica - NCBI
PREDICTED: Dreissena polymorpha myoglobin-like (LOC127867275), transcript variant X1, mRNA. (3451 bp)
gctctaacttctgtgtcccttcagatattgcttttatatttggtatgcatgtgtatctggacgacacctttccatgcgcatacaatattttaccactgtgaccttgaccttgagcttgaggtcaatgttcaggtttcgaaatctgcgaccgcgattcgaaaaaggctcagaactactgtgtcccttcaaggctctaacttctgtgtcccttcagatattgctttcatatttggtatgcatgtgtatctggacaacacctttcaatgcgcatacaatattctacccctgtgaccttgaccttgaacttgaggtcaatgttcaggttttgaaatctgcgattgcgattcgaaaaaggctcttaactactgtgtcccttcagatattgcttttatatttgatatgcatgtgtatcaggacaacaccattccatgcgcatacaattttttacacctgtgaccttgaccttgaacttcaagtcagcattcaggttgcaaaatctgcgaccgcgacttgaaaaaggctcacaactactgtgtcccttcaaatattgctttcatacttagtatgcatgtgtatctggacaacaccattccatgcgca...
position 2165
XM_052408327.1 - Dreissena polymorpha - NCBI
PREDICTED: Dreissena polymorpha myoglobin-like (LOC127867275), transcript variant X5, mRNA. (3489 bp)
gctctaacttctgtgtcccttcagatattgcttttatatttggtatgcatgtgtatctggacgacacctttccatgcgcatacaatattttaccactgtgaccttgaccttgagcttgaggtcaatgttcaggtttcgaaatctgcgaccgcgattcgaaaaaggctcagaactactgtgtcccttcaaggctctaacttctgtgtcccttcagatattgctttcatatttggtatgcatgtgtatctggacaacacctttcaatgcgcatacaatattctacccctgtgaccttgaccttgaacttgaggtcaatgttcaggttttgaaatctgcgattgcgattcgaaaaaggctcttaactactgtgtcccttcagatattgcttttatatttgatatgcatgtgtatcaggacaacaccattccatgcgcatacaattttttacacctgtgaccttgaccttgaacttcaagtcagcattcaggttgcaaaatctgcgaccgcgacttgaaaaaggctcacaactactgtgtcccttcaaatattgctttcatacttagtatgcatgtgtatctggacaacaccattccatgcgca...
position 2203
XM_052408330.1 - Dreissena polymorpha - NCBI
PREDICTED: Dreissena polymorpha myoglobin-like (LOC127867275), transcript variant X2, mRNA. (3491 bp)
gctctaacttctgtgtcccttcagatattgcttttatatttggtatgcatgtgtatctggacgacacctttccatgcgcatacaatattttaccactgtgaccttgaccttgagcttgaggtcaatgttcaggtttcgaaatctgcgaccgcgattcgaaaaaggctcagaactactgtgtcccttcaaggctctaacttctgtgtcccttcagatattgctttcatatttggtatgcatgtgtatctggacaacacctttcaatgcgcatacaatattctacccctgtgaccttgaccttgaacttgaggtcaatgttcaggttttgaaatctgcgattgcgattcgaaaaaggctcttaactactgtgtcccttcagatattgcttttatatttgatatgcatgtgtatcaggacaacaccattccatgcgcatacaattttttacacctgtgaccttgaccttgaacttcaagtcagcattcaggttgcaaaatctgcgaccgcgacttgaaaaaggctcacaactactgtgtcccttcaaatattgctttcatacttagtatgcatgtgtatctggacaacaccattccatgcgca...
position 2205
XM_052408328.1 - Dreissena polymorpha - NCBI
PREDICTED: Argiope bruennichi aggrecan core protein-like (LOC129975983), transcript variant X2, mRNA. (2703 bp)
aatgtagatcatcgtacactggagatatttgccaaaatgatatatgctcacttgatccgtgttacaatggtggcacttgtgagttggatggagatacttacaactgtaaatgtcgttttccatattctggtagaaactgtgaaaatgaaaggatcggaacttcaccagacgataaaacagagttgacaaatggcactaccaacgattatcaatggtcatctgaatttccggatatcttaaacgtgactacagacacttatcaatggacatcaaatgattcttcccaatttccggagaccttgaacatgaccacagacacttatcaaaggacatcaaatgactcttctgaatttcctgatatcttgaaagtgactacagacaattatcaatggacatcaaatgattcctcagaatttcctgatatcttgaacgtgactacagacaattatcaatggacatcaaatgattcctcagaatttccagacatcttgaacttgactacagacaattatcaatggacatcaaaggattcctcagaatttactgatatcttgaacgtgactacacacaattatcaatggacatcaaatgattcctcag...
position 690
XM_056089301.1 - Argiope bruennichi - NCBI
PREDICTED: Branchiostoma floridae uncharacterized LOC118405102 (LOC118405102), mRNA. (1943 bp)
accaggactgggcggtatctggtgttcaaaactcccgccgctgggaagatatgtaggacagtagagagaatggcggacaagattcggaaagagaaacagaggcaggagtcgcagggcaacatgggacaggaggcaacggcctgttgaccttgacctttgaaggacatttggtggcatgttgaccttgacctttttttttattgattgaatgatggtcgagaatgactgataaaattcggaaggaaaaacagacaagagtcgcagggcaacatgggacaggaggcaatgacctgctgaccttgaactttgaaggacatttgctggtctgttgacctttgatctttgaaggacatttccttccctttgaactctatggaatgatggtcgagtattgctgataagattcggaagaaaaacagagacaagagtctcaacttcggacagcaggaagcaaagacctgttgaccttgaactttgaaggacatttggaattacttccggttgaactcgatggaatgatggtcgagaatagctctgataagatttagaagacaaacagagacatgagtccagcaagtgtatttcggtcaggacggcacc...
position 739
XM_035804505.1 - Branchiostoma floridae (Florida lancelet) - NCBI
PREDICTED: Dreissena polymorpha cytoplasmic dynein 2 light intermediate chain 1-like (LOC127873897), transcript variant X2, misc_RNA. (2618 bp)
tgttataatcagaactccaagataaatcttgttttatgagctgacatctgcattgtcctgtgatcaatgtatttattataattgtatactattattatgcctttcgaagaaaagggggcatatagtgatcagactgtccgtctgtctgtccgtctttccatcacactttgcgtttaggtttcgaaaaatgctcataacttctatgtcccttgagatataaccttcatatttggtatgcatctgtatatggacaaggcctttccatacgcacaattttttttacccctatgaccttgaccttgaacttagggtccacgtttaggtttcgaaatctgcgtttaggtttcaaaaaattctcataacttctatgtccctggagatgtaaccttcatatttggtatgcatgtgtatatggacaaggcctttcaatacgcacacaaatatttacccctgtgaccttgaccttgaacttagggtccgcgtttaggtttcgaaatctgcgtttaggtttcaaaaaatgctaataacttctatgtcccttgagatataaccttcatatttggtatgcatgtgtataaggacaaggcctttccatacgca...
position 1797
XR_008046429.1 - Dreissena polymorpha - NCBI
PREDICTED: Triticum urartu small nucleolar RNA snoR35 (LOC125529027), ncRNA. (78 bp)
ncRNA 1..78 /ncRNA_class="snoRNA" /gene="LOC125529027" /product="small nucleolar RNA snoR35" /inference="COORDINATES: nucleotide motif:Rfam:12.0:RF01281" /inference="COORDINATES: profile:INFERNAL:1.1.1" /db_xref="GeneID:125529027" /db_xref="RFAM:RF01281" ORIGIN // cagagtgatggagaccttgaactgatccagattgaccagaaaaggatgttgcaaatggtcgtccggttgagtctggaa
position 13
XR_007292535.1 - Triticum urartu - NCBI
PREDICTED: Tupaia chinensis small nucleolar RNA SNORA31 (LOC114007086), ncRNA. (77 bp)
ncRNA 1..77 /ncRNA_class="snoRNA" /gene="LOC114007086" /product="small nucleolar RNA SNORA31" /inference="COORDINATES: nucleotide motif:Rfam:12.0:RF00322" /inference="COORDINATES: profile:INFERNAL:1.1.1" /db_xref="GeneID:114007086" /db_xref="RFAM:RF00322" ORIGIN // ctgcattcacagatagaccttgaacagtctggtattgttctacagtttgttccaggatgtgagaggaaaaaacatct
position 16
XR_003548740.1 - Tupaia chinensis (Chinese tree shrew) - NCBI
PREDICTED: Eptesicus fuscus mediator of DNA damage checkpoint 1 (MDC1), mRNA. (6402 bp)
tccatctccaccttctttagagtcccccattcccagctccaggcaaaacaggagtcaggaagctccggagaatcccttgtcctcagagctggaccctcttcatgcaaaacccaaatgcaggccccaggggtgttccaggatgacaccctctccagctccttctatagcccctgaggtccaccctgtcacctcccgagagcagcctgtcccccctgtgcccacatctcgggccactcggggtaggacacacagggcctctgtgaagacccctgaaccgactgtccccacagcccctgaccttgaacctccggcccctgcagaccagcctgtcacccctgcgcccacagcccctgatcttgaacctccggcccctgcagaccagcctgtcacccctgcccccacagcccctgaccttgaacctccggcccctgcagaccagcctgtcacccctgcgcccacagcccctgatcttgaacctccggcccctgcagaccagcctgtcacccctgcgcccacagcccctgatcttgaacctccggcccctgcagaccagcctgtcacccctgcacccacatctcgggccactcggggcaggacaca...
position 3256
XM_054721880.1 - Eptesicus fuscus (big brown bat) - NCBI
PREDICTED: Schistocerca cancellata uncharacterized LOC126175514 (LOC126175514), transcript variant X4, mRNA. (2099 bp)
caggcacatctgaaggacctttcgacacaagtcgtgtccctgatgctgagcaagctgcgacgagcttgacgcaacaagaggaaccctcttcacacatctcgtccttgaccaaactcagagaagtgtgcagacatctgaatcaagtaaagaataaaatgtttggaccatttttacaggggctctgcaagcacgtcggtgaaccagacacagatctgtcggcggaatcgattgggaccgtcactgctaccctagtgactaaagatgccgatgccattactgaagctgtaactgctgtgaccttgaacacagccaacacttacggtgcacagtcagcagtaaccagcgtggaaccagagacgggagtgacatacaatatttctgacacggagcttggcctattagtgtgtcagaactttcatttaatagataattccgtgtcctttatagcaagacggactcttggactctattgtaaaattatgaatcctacagatacagaaacgagtacggccgccaccacggaagtgatgtctgcacgcaagcttaccacaacagcggccgcaggcacatctgaaggacctttcgacacaagtcgtgtcc...
position 535
XM_049922341.1 - Schistocerca cancellata (South American locust) - NCBI
PREDICTED: Sphaeramia orbicularis tubulin gamma complex associated protein 4 (tubgcp4), transcript variant X2, mRNA. (2015 bp)
ccacaggacacctcacctcgagaaatcccgcccaccggctgggcggctctcggcctcacctataaagtccagtggcctctgcacatcctgttcactccggccgtcctcgagaagtacaacgttgtgttcaggtacctgctgagtgttcggagagtccagtctcagctgcagcactgctgggccctgcagatgcagaggaaacacctcaaatccagtcagacggacgccatcaagtggagactccgcaaccacatggcctttttgatcgacaacttgcagtactacctgcaggtaggaccttgaacgcaccacagtactacctataggtaggaccttgaatgcaccgcagtactacttacaggtaggaccttgaacgcaccgcagtactacttacaggtaggaccttgaacgcaccacagttctccctgtggctgagaaccccatgtggttctctgtacttgttcggttcataatgaaaccctgacaccgtttgtacataaatgaaccggatccattgatgtgtcagtgaatctgtggacagaaacaacaggacataaaaaatgggcccagattcacctcgtgtct
position 1726
XM_030122003.1 - Sphaeramia orbicularis (orbiculate cardinalfish) - NCBI
PREDICTED: Brassica napus small nucleolar RNA R71 (LOC125584617), ncRNA. (107 bp)
ncRNA 1..107 /ncRNA_class="snoRNA" /gene="LOC125584617" /product="small nucleolar RNA R71" /inference="COORDINATES: nucleotide motif:Rfam:12.0:RF00097" /inference="COORDINATES: profile:INFERNAL:1.1.1" /db_xref="GeneID:125584617" /db_xref="RFAM:RF00097" ORIGIN // aagccatgatgtgggcattgagaccaatagaccttgaacctctcccatgcttcactaaatccctatacgttcttctgctgaaagctagagatctcattcctgatctt
position 30
XR_007321529.1 - Brassica napus (rape) - NCBI
PREDICTED: Phyllostomus hastatus U6 spliceosomal RNA (LOC123813301), ncRNA. (107 bp)
snRNA" /gene="LOC123813301" /product="U6 spliceosomal RNA" /inference="COORDINATES: nucleotide motif:Rfam:12.0:RF00026" /inference="COORDINATES: profile:INFERNAL:1.1.1" /db_xref="GeneID:123813301" /db_xref="RFAM:RF00026" ORIGIN // actgcgttcaccttggtagtagtttcaaaaactggaatgacacagagaagacagcacggaccttgaacaatgataacacataatatcacgaaatgttccatatctta
position 59
XR_006784729.1 - Phyllostomus hastatus (greater spear-nosed bat) - NCBI

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/seq%3aGACCTTGAAC
lang : en | div : | spe : | query_string : seq:GACCTTGAAC | format : html | download : 

0.000 | 0.000 | search_start;
0.218 | 0.217 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:GACCTTGAAC)?to=0&format=json
0.358 | 0.140 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:GACCTTGAAC)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.363 | 0.006 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]