2024-04-30 00:18:53, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001410194 6824 bp mRNA linear PRI 01-JAN-2023 DEFINITION Homo sapiens GRIP and coiled-coil domain containing 2 (GCC2), transcript variant 2, mRNA. ACCESSION NM_001410194 NR_028063 VERSION NM_001410194.1 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 6824) AUTHORS Liang XH, Sun H, Hsu CW, Nichols JG, Vickers TA, De Hoyos CL and Crooke ST. TITLE Golgi-endosome transport mediated by M6PR facilitates release of antisense oligonucleotides from endosomes JOURNAL Nucleic Acids Res 48 (3), 1372-1391 (2020) PUBMED 31840180 REMARK GeneRIF: The co-localization of M6PR and of GCC2 with ASOs is influenced by the PS modifications, which have been shown to enhance the affinity of ASOs for proteins, suggesting that localization of these proteins to LEs is mediated by ASO-protein interactions. Reduction of M6PR levels also decreased PS-ASO activity in mouse cells and in livers of mice treated subcutaneously with PS-ASO, indicating a conserved mechanism. REFERENCE 2 (bases 1 to 6824) AUTHORS Kumar M, Kaur S, Nazir A and Tripathi RK. TITLE HIV-1 Nef binds with human GCC185 protein and regulates mannose 6 phosphate receptor recycling JOURNAL Biochem Biophys Res Commun 474 (1), 137-145 (2016) PUBMED 27105913 REMARK GeneRIF: In light of existing report suggesting critical role of Nef-GCC185 interaction reveals valuable mechanistic insights affecting specific protein transport pathway in docking of late endosome derived Rab9 bearing transport vesicle at TGN elucidating role of Nef during viral pathogenesis. REFERENCE 3 (bases 1 to 6824) AUTHORS Cheung PY, Limouse C, Mabuchi H and Pfeffer SR. TITLE Protein flexibility is required for vesicle tethering at the Golgi JOURNAL Elife 4, e12790 (2015) PUBMED 26653856 REMARK GeneRIF: These unexpected features support a model in which GCC185 collapses onto the Golgi surface, perhaps by binding to Rab GTPases, to mediate vesicle tethering. Publication Status: Online-Only REFERENCE 4 (bases 1 to 6824) AUTHORS Lin YC, Chiang TC, Liu YT, Tsai YT, Jang LT and Lee FJ. TITLE ARL4A acts with GCC185 to modulate Golgi complex organization JOURNAL J Cell Sci 124 (Pt 23), 4014-4026 (2011) PUBMED 22159419 REMARK GeneRIF: Deletion of the ARL4A-interacting region of GCC185 results in inability to maintain Golgi structure and modulate endosome-to-Golgi transport. REFERENCE 5 (bases 1 to 6824) AUTHORS Hayes GL, Brown FC, Haas AK, Nottingham RM, Barr FA and Pfeffer SR. TITLE Multiple Rab GTPase binding sites in GCC185 suggest a model for vesicle tethering at the trans-Golgi JOURNAL Mol Biol Cell 20 (1), 209-217 (2009) PUBMED 18946081 REMARK GeneRIF: Results show that GCC185 contains at least six binding sites for as many as 14 different Rab GTPases across its entire length. REFERENCE 6 (bases 1 to 6824) AUTHORS Burguete AS, Fenn TD, Brunger AT and Pfeffer SR. TITLE Rab and Arl GTPase family members cooperate in the localization of the golgin GCC185 JOURNAL Cell 132 (2), 286-298 (2008) PUBMED 18243103 REMARK GeneRIF: Rab and Arl GTPase family members cooperate in the localization of GCC2. REFERENCE 7 (bases 1 to 6824) AUTHORS Luke MR, Kjer-Nielsen L, Brown DL, Stow JL and Gleeson PA. TITLE GRIP domain-mediated targeting of two new coiled-coil proteins, GCC88 and GCC185, to subcompartments of the trans-Golgi network JOURNAL J Biol Chem 278 (6), 4216-4226 (2003) PUBMED 12446665 REMARK GeneRIF: targeting to subcompartments of trans-Golgi network by GRIP domain REFERENCE 8 (bases 1 to 6824) AUTHORS Krackhardt AM, Witzens M, Harig S, Hodi FS, Zauls AJ, Chessia M, Barrett P and Gribben JG. TITLE Identification of tumor-associated antigens in chronic lymphocytic leukemia by SEREX JOURNAL Blood 100 (6), 2123-2131 (2002) PUBMED 12200376 REFERENCE 9 (bases 1 to 6824) AUTHORS Eichmuller S, Usener D, Dummer R, Stein A, Thiel D and Schadendorf D. TITLE Serological detection of cutaneous T-cell lymphoma-associated antigens JOURNAL Proc Natl Acad Sci U S A 98 (2), 629-634 (2001) PUBMED 11149944 REFERENCE 10 (bases 1 to 6824) AUTHORS Scanlan MJ, Gordan JD, Williamson B, Stockert E, Bander NH, Jongeneel V, Gure AO, Jager D, Jager E, Knuth A, Chen YT and Old LJ. TITLE Antigens recognized by autologous antibody in patients with renal-cell carcinoma JOURNAL Int J Cancer 83 (4), 456-464 (1999) PUBMED 10508479 COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AC068941.7 and AC012487.12. On Jul 29, 2022 this sequence version replaced NR_028063.2. Summary: The protein encoded by this gene is a peripheral membrane protein localized to the trans-Golgi network. It is sensitive to brefeldin A. This encoded protein contains a GRIP domain which is thought to be used in targeting. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2009]. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC146789.1, AB002334.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1966682 [ECO:0000348] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-75 AC068941.7 89008-89082 76-132 AC068941.7 89435-89491 133-200 AC068941.7 92201-92268 201-305 AC012487.12 8350-8454 306-2771 AC012487.12 9021-11486 2772-2844 AC012487.12 12197-12269 2845-2945 AC012487.12 14905-15005 2946-3044 AC012487.12 15122-15220 3045-3164 AC012487.12 21067-21186 3165-3329 AC012487.12 21657-21821 3330-3434 AC012487.12 22432-22536 3435-3597 AC012487.12 23519-23681 3598-3698 AC012487.12 25006-25106 3699-3776 AC012487.12 25201-25278 3777-3914 AC012487.12 25881-26018 3915-4036 AC012487.12 27069-27190 4037-4213 AC012487.12 29208-29384 4214-4431 AC012487.12 31943-32160 4432-4626 AC012487.12 34661-34855 4627-4766 AC012487.12 36340-36479 4767-4968 AC012487.12 38923-39124 4969-6824 AC012487.12 46930-48785 FEATURES Location/Qualifiers source 1..6824 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="2" /map="2q12.3" gene 1..6824 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /note="GRIP and coiled-coil domain containing 2" /db_xref="GeneID:9648" /db_xref="HGNC:HGNC:23218" /db_xref="MIM:612711" exon 1..75 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" exon 76..132 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" misc_feature 129..131 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /note="upstream in-frame stop codon" exon 133..200 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" exon 201..305 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" CDS 288..5039 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /note="isoform 2 is encoded by transcript variant 2; CTCL tumor antigen se1-1; CLL-associated antigen KW-11; GCC protein, 185-kD; GRIP and coiled-coil domain-containing protein 2; Golgi coiled-coil protein GCC185; Ran-binding protein 2-like 4; renal carcinoma antigen NY-REN-53; 185 kDa Golgi coiled-coil protein" /codon_start=1 /product="GRIP and coiled-coil domain-containing protein 2 isoform 2" /protein_id="NP_001397123.1" /db_xref="GeneID:9648" /db_xref="HGNC:HGNC:23218" /db_xref="MIM:612711" /translation="
MKQEVEDSVTKMGDAHKELEQSHINYVKEIENLKNELMAVRSKYSEDKANLQKQLEEAMNTQLELSEQLKFQNNSEDNVKKLQEEIEKIRPGFEEQILYLQKQLDATTDEKKETVTQLQNIIEANSQHYQKNINSLQEELLQLKAIHQEEVKELMCQIEASAKEHEAEINKLNELKENLVKQCEASEKNIQKKYECELENLRKATSNANQDNQICSILLQENTFVEQVVNEKVKHLEDTLKELESQHSILKDEVTYMNNLKLKLEMDAQHIKDEFFHEREDLEFKINELLLAKEEQGCVIEKLKSELAGLNKQFCYTVEQHNREVQSLKEQHQKEISELNETFLSDSEKEKLTLMFEIQGLKEQCENLQQEKQEAILNYESLREIMEILQTELGESAGKISQEFESMKQQQASDVHELQQKLRTAFTEKDALLETVNRLQGENEKLLSQQELVPELENTIKNLQEKNGVYLLSLSQRDTMLKELEGKINSLTEEKDDFINKLKNSHEEMDNFHKKCEREERLILELGKKVEQTIQYNSELEQKVNELTGGLEETLKEKDQNDQKLEKLMVQMKVLSEDKEVLSAEVKSLYEENNKLSSEKKQLSRDLEVFLSQKEDVILKEHITQLEKKLQLMVEEQDNLNKLLENEQVQKLFVKTQLYGFLKEMGSEVSEDSEEKDVVNVLQAVGESLAKINEEKCNLAFQRDEKVLELEKEIKCLQEESVVQCEELKSLLRDYEQEKVLLRKELEEIQSEKEALQSDLLEMKNANEKTRLENQNLLIQVEEVSQTCSKSEIHNEKEKCFIKEHENLKPLLEQKELRDRRAELILLKDSLAKSPSVKNDPLSSVKELEEKIENLEKECKEKEEKINKIKLVAVKAKKELDSSRKETQTVKEELESLRSEKDQLSASMRDLIQGAESYKNLLLEYEKQSEQLDVEKERANNFEHRIEDLTRQLRNSTLQCETINSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKQKKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKELNQKLTNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKIKQLLVKTKKELADSKQAETDHLILQASLKGELEASQQQVEVYKIQLAEITSEKHKIHEHLKTSAEQHQRTLSAYQQRVTALQEECRAAKAEQATVTSEFESYKVRVHNVLKQQKNKSMSQAETEGAKQEREHLEMLIDQLKIKLQDSQNNLQINVSELQTLQSEHDTLLERHNKMLQETVSKEAELREKLCSIQSENMMMKSEHTQTVSQLTSQNEVLRNSFRDQVRHLQEEHRKTVETLQQQLSKMEAQLFQLKNEPTTRSPVSSQQSLKNLRERRNTDLPLLDMHTVTREEGEGMETTDTESVSSASTYTQSLEQLLNSPETKLEPPLWHAEFTKEELVQKLSSTTKSADHLNGLLRETEATNAILMEQIKLLKSEIRRLERNQEREKSAANLEYLKNVLLQFIFLKPGSERERLLPVINTMLQLSPEEKGKLAAVAQGEEENASRSSGWASYLHSWSGLR"
misc_feature <336..2843 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /note="Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:224117" misc_feature 2082..4418 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /note="chromosome segregation protein SMC, common bacterial type; Region: SMC_prok_B; TIGR02168" /db_xref="CDD:274008" misc_feature 4626..4820 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /note="Rab binding domain; Region: Rab_bind; pfam16704" /db_xref="CDD:435531" misc_feature 4821..4952 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /note="GRIP domain; Region: GRIP; pfam01465" /db_xref="CDD:426274" exon 306..2771 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" exon 2772..2844 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" exon 2845..2945 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" exon 2946..3044 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" exon 3045..3164 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" exon 3165..3329 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" exon 3330..3434 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" exon 3435..3597 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" exon 3598..3698 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" exon 3699..3776 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" exon 3777..3914 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" exon 3915..4036 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" exon 4037..4213 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" exon 4214..4431 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" exon 4432..4626 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" exon 4627..4766 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" exon 4767..4968 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" exon 4969..6824 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /inference="alignment:Splign:2.1.0" regulatory 5069..5074 /regulatory_class="polyA_signal_sequence" /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /note="hexamer: AATAGA" polyA_site 5089 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /note="major polyA site" regulatory 5280..5285 /regulatory_class="polyA_signal_sequence" /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /note="hexamer: AATAAA" polyA_site 5300 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /note="major polyA site" regulatory 5742..5747 /regulatory_class="polyA_signal_sequence" /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /note="hexamer: AATACA" regulatory 5767..5772 /regulatory_class="polyA_signal_sequence" /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /note="hexamer: AATAAA" polyA_site 5768 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" polyA_site 5792 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /note="major polyA site" regulatory 5975..5980 /regulatory_class="polyA_signal_sequence" /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /note="hexamer: AATAAA" polyA_site 5998 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" regulatory 6702..6707 /regulatory_class="polyA_signal_sequence" /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" /note="hexamer: GATAAA" polyA_site 6727 /gene="GCC2" /gene_synonym="GCC185; RANBP2L4; REN53" ORIGIN
agaggctggcgcaaacagaagtgcagcggtggcggcggctggttgcgggccggcggcgggctggcggagatggaggatcttgttcaagatggggtggcttcaccagctacccctgggaccgggaaatctaagaattggagaaagaaattgaagaactcagatcaaaacctgttactgaaggaactggtgatattattaaggcattaactgaacgtctggatgctcttcttctggaaaaagcagagactgagcaacagtgtctttctctgaaaaaggaaaatataaaaatgaagcaagaggttgaggattctgtaacaaagatgggagatgcacataaggagttggaacaatcacatataaactatgtgaaagaaattgaaaatttgaaaaatgagttgatggcagtacgttccaaatacagtgaagacaaagctaacttacaaaagcagctggaagaagcaatgaatacgcaattagaactttcagaacaacttaaatttcagaacaactctgaagataatgttaaaaaactacaagaagagattgagaaaattaggccaggctttgaggagcaaattttatatctgcaaaagcaattagacgctaccactgatgaaaagaaggaaacagttactcaactccaaaatatcattgaggctaattctcagcattaccaaaaaaatattaatagtttgcaggaagagcttttacagttgaaagctatacaccaagaagaggtgaaagagttgatgtgccagattgaagcatcagctaaggaacatgaagcagagataaataagttgaacgagctaaaagagaacttagtaaaacaatgtgaggcaagtgaaaagaacatccagaagaaatatgaatgtgagttagaaaatttaaggaaagccacctcaaatgcaaaccaagacaatcagatatgttctattctcttgcaagaaaatacatttgtagaacaagtagtaaatgaaaaagtcaaacacttagaagataccttaaaagaacttgaatctcaacacagtatcttaaaagatgaggtaacttatatgaataatcttaagttaaaacttgaaatggatgctcaacatataaaggatgagttttttcatgaacgggaagacttagagtttaaaattaatgaattattactagctaaagaagaacagggctgtgtaattgaaaaattaaaatctgagctagcaggtttaaataaacagttttgctatactgtagaacagcataacagagaagtacagagtcttaaggaacaacatcaaaaagaaatatcagaactaaatgagacatttttgtcagattcagaaaaagaaaaattaacattaatgtttgaaatacagggtcttaaggaacagtgtgaaaacctacagcaagaaaagcaagaagcaattttaaattatgagagtttacgagagattatggaaattttacaaacagaactgggggaatctgctggaaaaataagtcaagagttcgaatcaatgaagcaacagcaagcatctgatgttcatgaactgcagcagaagctcagaactgcttttactgaaaaagatgcccttctcgaaactgtgaatcgcctccagggagaaaatgaaaagttactatctcaacaagaattggtaccagaacttgaaaataccataaagaaccttcaagaaaagaatggagtatacttacttagtctcagtcaaagagataccatgttaaaagaattagaaggaaagataaattctcttactgaggaaaaagatgattttataaataaactgaaaaattcccatgaagaaatggataatttccataagaaatgtgaaagggaagaaagattgattcttgaacttgggaagaaagtagagcaaacaatccagtacaacagtgaactagaacaaaaggtaaatgaattaacaggaggactagaggagactttaaaagaaaaggatcaaaatgaccaaaaactagaaaaacttatggttcaaatgaaagttctctctgaagacaaagaagtattgtcagctgaagtgaagtctctttatgaggaaaacaataaactcagttcagaaaaaaaacagttgagtagggatttggaggtttttttgtctcaaaaagaagatgttatccttaaagaacatattactcaattagaaaagaaacttcagttaatggttgaagagcaagataatttaaataaactgcttgaaaatgagcaagttcagaagttatttgttaaaactcagttgtatggttttcttaaagaaatgggatcagaagtttcagaagacagtgaagagaaagatgttgttaatgtcctacaggcagtcggtgaatccttggcaaaaataaatgaggaaaaatgcaacctggcttttcagcgtgatgaaaaagtattagagttagaaaaagagattaagtgccttcaagaagagagtgtagttcagtgtgaagaacttaagtctttattgagagactatgagcaagagaaagttctcttaaggaaagagttagaagaaatacagtcagaaaaagaggccctgcagtctgatcttctagaaatgaagaatgctaatgaaaaaacaaggcttgaaaatcagaatcttttaattcaagttgaagaagtatctcaaacatgtagcaaaagtgaaatccataatgaaaaagaaaaatgttttataaaggaacatgaaaacctaaagccactactagaacaaaaagaattacgagataggagagcagagttgatactattaaaggattccttagcaaaatcaccttctgtaaaaaatgatcctctgtcttcagtaaaagagttggaagaaaaaatagaaaatctggaaaaagaatgcaaagaaaaggaggagaaaataaataagataaaattagttgccgtaaaggcaaagaaagaactagattccagcagaaaagagacccagactgtgaaggaagaacttgaatctcttcgatcagaaaaggaccagttatctgcttccatgagagatctcattcaaggagcagaaagctataagaatcttttattagaatatgaaaagcagtcagagcaactggatgtggaaaaagaacgtgctaataattttgagcatcgtattgaagaccttacaagacaattaagaaattcgactttgcagtgtgaaacaataaattctgataatgaagatctcctggctcgtattgagacattacagtctaatgccaaattattagaagtacagattttagaagtccagagagccaaagcaatggtagacaaagaattagaagctgaaaaacttcagaaagaacagaagataaaggaacatgccactactgtaaatgaacttgaagaacttcaggtacaacttcaaaagcaaaagaaacagcttcagaaaaccatgcaagaattagagctggttaaaaaggatgcccaacaaaccacattgatgaatatggaaatagctgattatgaacgtttgatgaaagaactaaatcaaaagttaactaataaaaacaacaagatagaagatttggagcaagaaataaaaattcaaaaacagaaacaagaaaccctacaagaagaaataacttcattacagtcttcagtacaacaatatgaagaaaaaaacaccaaaatcaagcaattgcttgtgaaaaccaaaaaggaactggcagattcaaagcaagcagaaactgatcacttaatacttcaagcatctttaaaaggtgagctggaggcaagccagcagcaagtagaagtctataaaatacagctggctgaaataacatcagagaagcacaaaatccacgagcacctgaaaacctctgcggaacagcaccagcgtacgctaagtgcataccagcagagagtgacagcactacaggaagagtgccgtgctgccaaggcagaacaagctactgtaacctctgaattcgagagctacaaagtccgagttcataatgttctaaaacaacagaaaaataaatctatgtctcaggctgaaactgagggcgctaaacaagaaagggaacatctggaaatgctgattgaccagctaaaaatcaaattacaagatagccaaaataacttacagattaatgtatctgaacttcaaacattgcagtctgaacatgatacactgctagaaaggcacaacaagatgctgcaggaaactgtgtccaaagaggcggaactccgggaaaaattgtgttcaatacagtcagagaacatgatgatgaaatctgaacatacacagactgtgagtcagctaacatcccagaacgaggtccttcgaaatagcttccgagatcaagtgcgacatttgcaggaagaacacagaaagacagtggagacattacagcagcagctctccaagatggaagcacagctcttccagcttaagaatgaaccgaccacaagaagcccagtttcctctcaacaatctttgaagaaccttcgagaaaggagaaacacagacctcccgcttctagacatgcacactgtaacccgggaagagggagaaggcatggagacaactgatacggagtctgtgtcttccgccagcacatacacacagtctttagagcagctgcttaactctcccgaaactaaacttgagcctccattatggcatgctgaatttaccaaagaagaattggttcagaagctcagttccaccacaaaaagtgcagatcacttaaacggcctgcttcgggaaacagaagcaaccaatgcaattcttatggagcaaattaagcttctcaaaagtgaaataagaagattggaaaggaatcaagagcgagagaagtctgcagctaacctggaatacttgaagaacgtcttgctgcagttcattttcttgaaaccaggtagtgaaagagagagacttcttcctgttataaatacgatgttgcagctcagccctgaagaaaagggaaaacttgctgcggttgctcaaggtgaggaagaaaatgcttcccgttcttctggatgggcatcctatcttcatagttggtctggacttcgataggttgatggaaggaatatttttattaaccaaatagaatctatttacaaaaatggttcacgtatattaccacaattcttttgtcaaaaagtgtgtatatatgtttgcatctacatatatttgtacatctatatgacagatgtattttaaaagtttcatcttgaagtaaaagtacaacagcttgaagtgttgatagcaggccacagccctctaactcatgtgatttcccatgcatgctgccagaataaaaccaccaggaatgaattcactccccacttctctggaacctcaggacccgcccatttctcggcagtactgtgaattttgaagttaaactaaattttggtaccataccaactggaatttaggctttaaaaataatgtttcaaggccaggtgtggtgattcatgcctgaaatcccactactttgggaggctgaggctggagaattgcttgaggctagtgagctgtgactcccactgcactccagctcggggaacagagcgagaccttgtctctaaaaataatagtaataaaataaaaataacgttttatgactatttattgcaaggtcagagttacagattgttataaattgttgagaaatttttgtgattagaatatgaaggaaaaagctttgttggtaaaagtgacatgttaaggggctatgaagtaaatatgctgcagttaattatgctaagttaaaatacagtttagttatttgctttaaaataaactcttctttttttctttaaagtatactatctcaaaactcattatgttgtcagagccctagagctggctagtgtaacactgactatgagtaggtgggcccacacttgagttgaggtgatttcatggtgtctttccaggctcttgatagggtgtcactgcatgcaagccatgaatctgttttgagaatcctctccattttcccaaataaaaacctatcacaacagtgactatatcactcagcattggatctaaatataaaagtggtgctttcagtgtttttggcagatagtgttccataagctttccatcagaagggattttagacaccttagaggtccgtgctacatcgtcacagttcctccgaataaccttaggtggtagtgttacttgcctttgacacctctgcatatgttttaatgactagatccaaactgtgttgttcttaaatcaaaaattggataatttgtaatatttatgtgttaatcacacagtatgctctctgaagttctcttaagccttcagtttatactcttaatttaattttctttctgagctggagaactggctttgcactttggttacacagaacattggtttccaattcagtttaactgaaatttgctgctgatatgttgagtttgttctttaaaaaatagctcatatatctcatctttcctcctgtcttagaagaacagacctaactagtgaatgtattaatgaaaatgcatctatttcagagctgacatgaagagtttagtttttttactttataaactgtgaatatgagtatgccagctgcatacgatgtaactaatcatatttaaatatatttcactttctctttgactttagaccttttgaagtctgtataaacttgttttgaaatatagtctctgcttacgaatgtcataacaaaataattttttgcatgataaaaaattactttgattacaaaaggcatattctttcatggtttctgcaatgagaggaagtgtaatgattattttaatatttctattaaatatgtttaactgtatatttttatggctgctc
//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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