2024-05-17 02:44:52, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_200297 1638 bp mRNA linear VRT 18-NOV-2023 DEFINITION Danio rerio monoglyceride lipase (mgll), mRNA. ACCESSION NM_200297 VERSION NM_200297.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE 1 (bases 1 to 1638) AUTHORS Hu R, Xu Y, Han B, Chen Y, Li W, Guan G, Hu P, Zhou Y, Xu Q and Chen L. TITLE MiR-202-3p determines embryo viability during mid-blastula transition JOURNAL Front Cell Dev Biol 10, 897826 (2022) PUBMED 36003151 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 1638) AUTHORS Zhang W, Wu C, Ni R, Yang Q, Luo L and He J. TITLE Formimidoyltransferase cyclodeaminase prevents the starvation-induced liver hepatomegaly and dysfunction through downregulating mTORC1 JOURNAL PLoS Genet 17 (12), e1009980 (2021) PUBMED 34941873 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 1638) AUTHORS Bian WP, Pu SY, Xie SL, Wang C, Deng S, Strauss PR and Pei DS. TITLE Loss of mpv17 affected early embryonic development via mitochondria dysfunction in zebrafish JOURNAL Cell Death Discov 7 (1), 250 (2021) PUBMED 34537814 REMARK Publication Status: Online-Only REFERENCE 4 (bases 1 to 1638) AUTHORS Han SL, Qian YC, Limbu SM, Wang J, Chen LQ, Zhang ML and Du ZY. TITLE Lipolysis and lipophagy play individual and interactive roles in regulating triacylglycerol and cholesterol homeostasis and mitochondrial form in zebrafish JOURNAL Biochim Biophys Acta Mol Cell Biol Lipids 1866 (9), 158988 (2021) PUBMED 34111526 REFERENCE 5 (bases 1 to 1638) AUTHORS Knuth MM, Stutts WL, Ritter MM, Garrard KP and Kullman SW. TITLE Vitamin D deficiency promotes accumulation of bioactive lipids and increased endocannabinoid tone in zebrafish JOURNAL J Lipid Res 62, 100142 (2021) PUBMED 34673019 REFERENCE 6 (bases 1 to 1638) AUTHORS Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W and Hertzano R. TITLE RFX transcription factors are essential for hearing in mice JOURNAL Nat Commun 6, 8549 (2015) PUBMED 26469318 REMARK Publication Status: Online-Only REFERENCE 7 (bases 1 to 1638) AUTHORS Falcinelli S, Picchietti S, Rodiles A, Cossignani L, Merrifield DL, Taddei AR, Maradonna F, Olivotto I, Gioacchini G and Carnevali O. TITLE Lactobacillus rhamnosus lowers zebrafish lipid content by changing gut microbiota and host transcription of genes involved in lipid metabolism JOURNAL Sci Rep 5, 9336 (2015) PUBMED 25822072 REMARK Publication Status: Online-Only REFERENCE 8 (bases 1 to 1638) AUTHORS Klee EW, Schneider H, Clark KJ, Cousin MA, Ebbert JO, Hooten WM, Karpyak VM, Warner DO and Ekker SC. TITLE Zebrafish: a model for the study of addiction genetics JOURNAL Hum Genet 131 (6), 977-1008 (2012) PUBMED 22207143 REMARK Review article REFERENCE 9 (bases 1 to 1638) AUTHORS McPartland JM, Glass M, Matias I, Norris RW and Kilpatrick CW. TITLE A shifted repertoire of endocannabinoid genes in the zebrafish (Danio rerio) JOURNAL Mol Genet Genomics 277 (5), 555-570 (2007) PUBMED 17256142 REFERENCE 10 (bases 1 to 1638) AUTHORS Song HD, Sun XJ, Deng M, Zhang GW, Zhou Y, Wu XY, Sheng Y, Chen Y, Ruan Z, Jiang CL, Fan HY, Zon LI, Kanki JP, Liu TX, Look AT and Chen Z. TITLE Hematopoietic gene expression profile in zebrafish kidney marrow JOURNAL Proc Natl Acad Sci U S A 101 (46), 16240-16245 (2004) PUBMED 15520368 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC049487.1. On Aug 31, 2012 this sequence version replaced NM_200297.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC049487.1, AY398382.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-1638 BC049487.1 2-1639 FEATURES Location/Qualifiers source 1..1638 /organism="Danio rerio" /mol_type="mRNA" /db_xref="taxon:7955" /chromosome="8" /map="8" gene 1..1638 /gene="mgll" /gene_synonym="cb909; wu:fc66g01; zgc:56561" /note="monoglyceride lipase" /db_xref="GeneID:378960" /db_xref="ZFIN:ZDB-GENE-031006-9" exon 1..119 /gene="mgll" /gene_synonym="cb909; wu:fc66g01; zgc:56561" /inference="alignment:Splign:2.1.0" misc_feature 71..73 /gene="mgll" /gene_synonym="cb909; wu:fc66g01; zgc:56561" /note="upstream in-frame stop codon" exon 120..264 /gene="mgll" /gene_synonym="cb909; wu:fc66g01; zgc:56561" /inference="alignment:Splign:2.1.0" CDS 140..1042 /gene="mgll" /gene_synonym="cb909; wu:fc66g01; zgc:56561" /EC_number="3.1.1.23" /codon_start=1 /product="monoglyceride lipase" /protein_id="NP_956591.1" /db_xref="GeneID:378960" /db_xref="ZFIN:ZDB-GENE-031006-9" /translation="
MPEPEGTRRSPQGVPYSDLPHIVNADGLHLFCRYWEPDGPPKALVYVAHGAGEHCGGYADIAHSLTQHGILVFAHDHVGHGQSEGERMELKNFQIYVRDSLQHIDIMKARYPKLAVFIVGHSMGGAISILTACERPQDFTGVVLIGPMVQMSAESATPFKVFMAKVLNRLAPKLTLGPIDPKFVSRDPKQVEAYEKDELNYHGGLRVSFGMQMLDATSRIERELPDIRWPFYILHGDADKLCDIRGSRLLYNEAKSTDKKLKVYEEAYHALHHDLPETIESVLKEVSTWILERVPAPQTS"
misc_feature 254..964 /gene="mgll" /gene_synonym="cb909; wu:fc66g01; zgc:56561" /note="Serine aminopeptidase, S33; Region: Hydrolase_4; pfam12146" /db_xref="CDD:432361" exon 265..371 /gene="mgll" /gene_synonym="cb909; wu:fc66g01; zgc:56561" /inference="alignment:Splign:2.1.0" exon 372..508 /gene="mgll" /gene_synonym="cb909; wu:fc66g01; zgc:56561" /inference="alignment:Splign:2.1.0" exon 509..619 /gene="mgll" /gene_synonym="cb909; wu:fc66g01; zgc:56561" /inference="alignment:Splign:2.1.0" exon 620..709 /gene="mgll" /gene_synonym="cb909; wu:fc66g01; zgc:56561" /inference="alignment:Splign:2.1.0" exon 710..925 /gene="mgll" /gene_synonym="cb909; wu:fc66g01; zgc:56561" /inference="alignment:Splign:2.1.0" exon 926..1622 /gene="mgll" /gene_synonym="cb909; wu:fc66g01; zgc:56561" /inference="alignment:Splign:2.1.0" ORIGIN
agtgcgggaaacagcagcaggctgaacgccgctgtcaaacgccggcttcgttagcggaccactcactccataacctgaattgatttctgcctccagcattcagcctgtagcaggttctgactcaaccctcagcggggacatgccggaacccgaggggactcgtcggtcaccgcaaggtgttccttacagcgacctgccgcacatcgtcaacgccgacggactgcacttgttctgtcgttactgggagcccgacggtcctccgaaggcgctggtgtatgttgcccatggagcgggagagcattgtgggggatacgctgacattgctcacagtctgacccagcatggcattctggtgttcgcccacgaccacgttggtcatggtcaaagtgaaggtgagaggatggagctcaaaaacttccagatttacgtcagagactccctccagcacattgacatcatgaaggctcggtatcccaagctggccgtcttcatcgttggacattcaatgggaggagccatttccattctgaccgcatgcgagaggccgcaggattttacaggtgtggttctcattggccctatggttcagatgagtgctgaatctgctacacccttcaaggttttcatggccaaagttctaaaccgcttggctcctaaactcactctcggcccaatcgatccaaaatttgtctcacgggatcccaaacaggtggaggcatatgaaaaggatgagctgaattatcatggggggctacgcgtctcgttcgggatgcagatgttggatgcgacgtctcgcatcgagagagagttaccagacatcaggtggcccttttacattctacatggagacgccgacaaactgtgtgacatcagaggctctcgattattgtataatgaagccaagagcactgataaaaaactgaaggtatatgaagaagcttaccatgccctacatcacgacttacctgaaacaatcgagtctgtattaaaggaggtgagcacctggatcctggagagagtccctgcccctcaaacctcttagctgtcaatcacagcatacacacacacatgcctaagctccgcccctgtccaatcacatctctactttacagagagatatcagcctgcactacatgcaaacaatactatcctctgtttaattaacctagaggtctttactaagtgacctttgagcataaggcaaagcactggagatgaaaaaggtgaaaaatgatcaccatacttcaccagttgaccaattacttaaagaaataaattttttataacaagatttgatatgctatgtttaaatatgaaacgaggctcataaaaatatatttcaagcataaaaatctgaactgaagtcaggtttaaaaaagatctttttgacaccacagggtcttttttatcactccataattcagaaactacaacgaacagccagcaaaaatattataataacaatattttttaagaataaaagtttatatgcaatcagataaattatgtatagacatatatcccttggtagaaactttcaacatatagatacaactgacaaattggtgtaaaaatgtgatgaatgtaagatctgaaagctgctgaaatggaaatatagtgcaaaagaaaaaaaaaaaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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