2024-05-07 05:54:41, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XR_008339995 2540 bp RNA linear VRT 12-MAR-2023 DEFINITION PREDICTED: Pleuronectes platessa dicer 1, ribonuclease type III (dicer1), transcript variant X5, misc_RNA. ACCESSION XR_008339995 VERSION XR_008339995.1 DBLINK BioProject: PRJNA929487 KEYWORDS RefSeq. SOURCE Pleuronectes platessa (European plaice) ORGANISM Pleuronectes platessa Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Pleuronectes. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_070636) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_947347685.1-RS_2023_03 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 03/11/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2540 /organism="Pleuronectes platessa" /mol_type="transcribed RNA" /db_xref="taxon:8262" /chromosome="11" gene 1..2540 /gene="dicer1" /note="dicer 1, ribonuclease type III; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:128450392" misc_RNA 1..2540 /gene="dicer1" /product="dicer 1, ribonuclease type III, transcript variant X5" /db_xref="GeneID:128450392" ORIGIN
ttctcgttctccaaacgagactagcgtgtcattagtaccgcggatagtttcgtcttacgttatattcctactagtgtagcagggctcaagtggtcccaccgtgagaggaaacccaccaaatcggataagcaagggtggatggcagttaggatatcaaacgaatgatttcaagccatttagtcaagacgaacaatctacaatcatacaccagtgaccattatgaaatgaaataaagtggacgactggaggagcccagccccctgacctccaactctttgaaacatggcgggtttacagcttgtcactcctgctacttcacccatggggcctttctttggtctgccatggcagcaggaggctatccatgacaacatctatacacccaggaaatatcaggtagaacttcttgaagcagctcttgaacataatactattgtctgcttgaatactggctcagggaagacctttattgcagtacttctagcaaaagagctctcccaccaaatccgtggacattatcaaagaaacgccaagaggactgtttttctggtgaacacagctttgtctgtagttcagcaagcagctgcagtcaggactcactcagaccttcaggtgggagagtacacagatttggaggaaacctcagcatggactgaccaacggtggagtcaagagataaccgagaatcaggtgctggtcatgacttgccacatattcctgcatgttttgaggactaaaatcttactgttatctaaaatcaacttggtggtttttgatgattgtcacctggccattacagaccacccctactgtgagataatgaagctgtttgaagggtgttcatgtagtcctcgtatcctgggtctcacagcttctcttctaaatggaaaatgtgacccttcagacctggagcagaagatccagaatttggaatcaatcttgaagagcaatgctgagactgccacagaccttgttgtcctagacagatactcctctcagccaagagaagtggtgctggactgcggcccctatttggacaagagtggtctttcctcccatttgttggtggaactggacgaagctctctacttcctgaacgattgcaacatgtctgttgacagggaggatcgcaatcctacattaatttccaaacagatcctgagtgactgccgggctgtgctgcaggtgctggggccctggtgtgcagataaggcggcaggcattatggtgcgggagctccaaaagtatatcaaacatgagcaggaagagctcaaccgtaagttcctgctcttcactgacaccatcctgcgcaaagtgcatgccctctgcgaggagcacttctcccctgcttcactggacctcaagtatgtcacccctaaggtcatccggctgcttgagatcctccacgaatacaagccctttgagcggcagcagtttgaaagcgttgagtggtacaacaatcggaaccaggacaactatgtgtcctggagtgactcagaggatgacgatgaggatgaggaggtggagtccaaagagaggcctgaatccaactttccctcacctttcaccaacattctgtgtgggatcatctttgtggagaggcgttacacagctgttgttctcaaccgtctaatcaaagaagcggggaagcaggacccagagctggcttatatcagcagcaacttcataactggccaaagtattggcaaaaaccagccacggaacaaacagatggaggtggagtttaggaaacaagaggaggttctccgcaaattccgggctcatgaaaccaacctccttattgccaccagcattgtggaggaaggtgtggatattccaaagtgcaacctggtagtgcgatttgacctgcccactgagtacaggtcctacgtccagtccaaaggcagagctcgggctcctgtctccaactacataatgctggctgacagtgagaggaccaaagctttcgaggaagatctcgctacatacaaggccatagagaagatcctgaggaacaagtgttccaagtcagttgaggtgattgactttgaagtggagcaggttctggatgatgacaacacccttccaccttatgtgcttcgatctgaggatggaggtccccaggtcaccattaacacagccattggacacattaacaggtattgtgctcggctacccagcgatccatttacccacttggcacccaaatgtaaaactttggagatgcaggatggatgtttccagtcaacactctacttacctatcaattcccctctgcgagtccctgttaaggttcattcattttatggatgtgtcattgacagggtcctacaatgacctgtgccagattagctgagaaagctgttgcactagtatgctgtgagaaactccacaaaacgggtgagttggatgatcacctgatgcccgttgggaaggagactgtcaagtatgaggaggagttggaccttcatgatgaggaggagaccagtgtcccaggccgacctggttctaccaaaaggaggcagtgctaccccaaagct
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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