2024-05-07 05:50:36, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XR_007774591 1568 bp RNA linear VRT 26-FEB-2023 DEFINITION PREDICTED: Gopherus flavomarginatus dicer 1, ribonuclease III (DICER1), transcript variant X16, misc_RNA. ACCESSION XR_007774591 VERSION XR_007774591.1 DBLINK BioProject: PRJNA885463 KEYWORDS RefSeq. SOURCE Gopherus flavomarginatus (Mexican gopher tortoise) ORGANISM Gopherus flavomarginatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Gopherus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_066621) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_025201925.1-RS_2023_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/26/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1568 /organism="Gopherus flavomarginatus" /mol_type="transcribed RNA" /isolate="rGopFla2" /db_xref="taxon:286002" /chromosome="5" /tissue_type="blood" /dev_stage="juvenile" /country="USA: Raton, New Mexico" /lat_lon="36.88 N 104.97 W" /collection_date="2018-07-31" /collected_by="Taylor Edwards" gene 1..1568 /gene="DICER1" /note="dicer 1, ribonuclease III; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:127051748" misc_RNA 1..1568 /gene="DICER1" /product="dicer 1, ribonuclease III, transcript variant X16" /experiment="COORDINATES: polyA evidence [ECO:0006239]" /db_xref="GeneID:127051748" ORIGIN
gtgctctctttgcgtagggccggcctcgcagggggaagggagggcaggaggctgtcccgggcccaggtgaatggaggaacctgacagctggggggagtcaggcggcggcggggaagtggcggcgggagcagcacaatgagacgcggcctgtagcggggaggctctaggctgggtctagtccggaaggttacctagggtgaaacaaaattacaggcttgaaactctggaaaagctcagtagcagcattcgagagcagaagcttgcaaatgatgcaattaatgtataaactgatatcatgatgtcaaaatgcagttcaaagaacacaaacacagagatctcagaaattaaaacgcaggtcaggaagaatccgtcaggaacttcagctgttgacaatactacatgggttatagaagaagctcttcagaggcagagggaggccactcagactcactacatttccccagaattgtaaacaaggtccagcatggagcgaacagaagacattggatctgatttcctgtatggggagaagaatctgtgcaggcagaactccgatcaaaaagaagaaatgctaatatatatgccaaaatcgcacagggcatggtggacagaggctacaacagggacatgcagcagtgccacctgaaagtcaaggagctcaggcaagcctatcaaaagacaaaggaagcaaatggtcactctgggacagagccccatacatgccgcttctgtgatcagctgcatggcattctggagtgggggagcctaccagtactccaccacggtctgtggacacctgcaagggaggaatctcatgcaacatggaggaggattttgtggaggaggaggagaatacacagcaggcaagtggtgaatccgttctccccggcagccaggacttttcatcagcccggaggcaataccctcccaaggcgggatccctgaccgtgaaggtggagaagccatctctggtgcaaatatttctgtgctccccctatcatctccgtccctgaggttatcgcagattagaagatgaaaaaaatgcactcgcgatgacatgttttctgagctcatgcagtcctcccccactgatagggcacagctgaatgcatgaatgcattcagtgacagagtccaggaaagcattaagtgaacatgatgagaagagtcaggatgcaatgctgatgctaatgggggaacaaacggacatgctcaggcatctcgtggagctgcaggaaagccaagagcacagactgccactggatccactgtacaactgcctgccctcctcctcaagttccatatcctcctcacccagacacccaagaatgtgggggaggggggagggcaggctccgggcacccagccactcctccagagaatggcccaagcaacagaaggctgtcattcaaacagttttgatttgtagtgtggttacaataagcaatgtggccttgtccttccctcctcccccaccccaccctactcttcctgggctatcttaccagttatctcccttcattaattaaaaaaaaaaaataattaaaaaaaagcatcgtttcaaaacaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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