2024-05-07 08:33:17, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XR_007485931 3332 bp RNA linear VRT 27-FEB-2023 DEFINITION PREDICTED: Syngnathus scovelli dicer 1, ribonuclease type III (dicer1), transcript variant X6, misc_RNA. ACCESSION XR_007485931 VERSION XR_007485931.1 DBLINK BioProject: PRJNA863313 KEYWORDS RefSeq. SOURCE Syngnathus scovelli (Gulf pipefish) ORGANISM Syngnathus scovelli Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_026061232) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_024217435.1-RS_2023_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/26/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3332 /organism="Syngnathus scovelli" /mol_type="transcribed RNA" /strain="Florida" /db_xref="taxon:161590" /chromosome="Unknown" /sex="male" /tissue_type="body" /dev_stage="adult" gene 1..3332 /gene="dicer1" /note="dicer 1, ribonuclease type III; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:125981413" misc_RNA 1..3332 /gene="dicer1" /product="dicer 1, ribonuclease type III, transcript variant X6" /db_xref="GeneID:125981413" ORIGIN
agctagcgtgtgtccgtggttcaatggcagcgcgaaccatttacggatattcttggtggatttagttgactgtggttattgtctcatagcagcatgtaacgcaatttacgttcatgttatgtcctagctaaggcgcagatcacaggagatggtcctaaagtggcaaatagacacgtaaattactgtgacagcagagcgaatgaaagacacgggcttcaacgcaaatattgtggctcaactgaacacataaaaggcttgttcatggaagaccaaagcatttactggtggggccaagattaagtatttcctaatccagatccacttcaggattgctacttatgaaattgctcggatatgaaataaagtggacgacgggaggagttgtgcccactcactcttctccaacattttgaagaatggcaggcctgaagcttgtcacgccggccacatctcccatggggccttttttcggacttccgtggcagcaggaggctatccacgataatatctatacacctagaaaatatcaggtggaacttctcgaagcagctcttgaacgtaacactatcgtctgcttaaatagtggctcagggaagacctttattgcagttctcctaacgaaagagctctcccaccaaattcggggagagtacctaggaaatgcgaagaggactgtatttcttgttaactcagccttgtctgttgctcagcaagcagctgccatcagaactcactctgacctccacgtgggagagtacaccgacgtggaggaggctttggcgtggacctaccatcagtggagccaaaagatagccaggatacaggttctggtaatgacttgccatatcttcctgcatatgctgaggaatcaaatcttacctttgtccaaaatcaacttggtggtttttgatgattgtcatcttgccatcacagagcacccctactgtgagatcatgaagctatttgatggaagctcggcaaatcctcgcattctgggtctcacagcctccattctgaacggcaaatgcgacccgtcggaccttgagcagaaaatacagagtttggagcgagtcctgaagagcaacgctgaaactgccactgaccttgtagttctagacagatatgcctctcagccaagagaggttgtgctggactgtggcccctatctggacaagagtgggctatcctctcgtctccaagtggagttggatggagctctggacttcttaaacgattgttacgtctctgttccgagagaggacagaggtccgacagtcatctcccgacaggtactaagtgaatgcaaggctgtgctccaggtgctgggaccctggtgtgcagacaaagcagcaggcatcatggtgcgggagctccagaagtacatcaaacacgaacagggggagcttcaccgcaaatttctgctcttcaccgacaccgttctcagaaaagtccacgccctttgtgaagaacatttctctcctgcctccttggacctcaagtttgtcacaccaaaggttctccgtctgctggaggtcctgcacgaatacaagccttttgagcgccagcagtttgagagcgtcgagtggtacaacaaccgcaatcaggacaattatgtgtcttggagtgattcggaggaagaagatgaggatgaagaagcggagaccaaagagcggcccgaagccaactttccttcgccgttcaccaacattctatgcggaattatatttgtggagaggcggtacacggcggtcgtcctaaatcgtcttatcaaagaagcgggaaagcaggacccagagttggcttacatcagcaacaactttattaccggccatagcattggcaggaatcagccgcggaacaagcagatggaggtggaattcagaaagcaagaggaggttctgcgcaaatttcgagctcacgaaaccaacctgctgattgccaccagcattgtggaggaaggtgtggacattccaaagtgtaacttggtggtgcgctttgacttgccgactgaatacaggtcctatgttcagtccaaaggcagagctcgagctcccgtctccaactatgttatgctggccgatagcgacaagaccacgtgctttgaaaatgatctgggtacctacaaggccattgaaaagatcttgaggaacaagtgctccaagtctgtggaggttggcgagtttgaaggagatcagcaagtgttggacgatgacaacatccttcctccgtatgtgcttcaatctgaggacggcggtcctcgggtcaccgttaacacggccatcggtcacattaataggtattgcgctcggctgccgagtgacccctttacccacttggctcccaagtgtaaaacggtggcgacgccagatggcagattccagtcgacgcttcatttacccatcaactccccgctcagagtgcctgttaagggtccaaaaatgaattgttccagattggcagagaaagcagttgccctactttgttgtgagaaactgcatcaaataggcgaactggatgatcatttgatgccagttgggaaggagacggtaaagtacgaggaagagctggaccttcacgatgaagaagaaacctgcgttcccggacggcctggctcgacaaagaggcgacagtgctacctgaaagctataccagagtgtctgcaggacagttttgctgtccaccagcatacttactacttgtacgtcatcggaatggttctcaccacaccgctcccggatgagctcaacttccggcgaaggaagctttacccaccggaggacagcactcgctgtttcggcatcctgacggctcaacccataccgcgaatcccccattttcctgtctacacgcgctcgggcgaggtgaccatctccatcgagctccagaagtgtggcttcaagctcaccgccgctgagctggagctcatcattcgcctgcaccagtacatcttctcccatatccttcgcttagagaaacctgcactggagttcaagcctacacttgctgactctgcttactgtgttctacctctcaatattgttggagattccaacacgttggatatggacttcaagttcatggaggatattgaaaggtctgaggcccgaactggcattccgactactcattacaccaagcaacagccgttcaacttcaagttggaggattaccaggatgctgtcatcattccaagaatatgagacatttgctgagtactacaaaaccaagtacaatctggatttatccaacctgaaccagccactcttggatgttgaccatacctcatccagactcaatctcttaacacctcgtcacctgaaccaaaaaggcaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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