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2024-05-07 08:33:17, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XR_007485931            3332 bp    RNA     linear   VRT 27-FEB-2023
DEFINITION  PREDICTED: Syngnathus scovelli dicer 1, ribonuclease type III
            (dicer1), transcript variant X6, misc_RNA.
ACCESSION   XR_007485931
VERSION     XR_007485931.1
DBLINK      BioProject: PRJNA863313
KEYWORDS    RefSeq.
SOURCE      Syngnathus scovelli (Gulf pipefish)
  ORGANISM  Syngnathus scovelli
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei;
            Syngnathidae; Syngnathus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026061232) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_024217435.1-RS_2023_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/26/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3332
                     /organism="Syngnathus scovelli"
                     /mol_type="transcribed RNA"
                     /strain="Florida"
                     /db_xref="taxon:161590"
                     /chromosome="Unknown"
                     /sex="male"
                     /tissue_type="body"
                     /dev_stage="adult"
     gene            1..3332
                     /gene="dicer1"
                     /note="dicer 1, ribonuclease type III; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:125981413"
     misc_RNA        1..3332
                     /gene="dicer1"
                     /product="dicer 1, ribonuclease type III, transcript
                     variant X6"
                     /db_xref="GeneID:125981413"
ORIGIN      
agctagcgtgtgtccgtggttcaatggcagcgcgaaccatttacggatattcttggtggatttagttgactgtggttattgtctcatagcagcatgtaacgcaatttacgttcatgttatgtcctagctaaggcgcagatcacaggagatggtcctaaagtggcaaatagacacgtaaattactgtgacagcagagcgaatgaaagacacgggcttcaacgcaaatattgtggctcaactgaacacataaaaggcttgttcatggaagaccaaagcatttactggtggggccaagattaagtatttcctaatccagatccacttcaggattgctacttatgaaattgctcggatatgaaataaagtggacgacgggaggagttgtgcccactcactcttctccaacattttgaagaatggcaggcctgaagcttgtcacgccggccacatctcccatggggccttttttcggacttccgtggcagcaggaggctatccacgataatatctatacacctagaaaatatcaggtggaacttctcgaagcagctcttgaacgtaacactatcgtctgcttaaatagtggctcagggaagacctttattgcagttctcctaacgaaagagctctcccaccaaattcggggagagtacctaggaaatgcgaagaggactgtatttcttgttaactcagccttgtctgttgctcagcaagcagctgccatcagaactcactctgacctccacgtgggagagtacaccgacgtggaggaggctttggcgtggacctaccatcagtggagccaaaagatagccaggatacaggttctggtaatgacttgccatatcttcctgcatatgctgaggaatcaaatcttacctttgtccaaaatcaacttggtggtttttgatgattgtcatcttgccatcacagagcacccctactgtgagatcatgaagctatttgatggaagctcggcaaatcctcgcattctgggtctcacagcctccattctgaacggcaaatgcgacccgtcggaccttgagcagaaaatacagagtttggagcgagtcctgaagagcaacgctgaaactgccactgaccttgtagttctagacagatatgcctctcagccaagagaggttgtgctggactgtggcccctatctggacaagagtgggctatcctctcgtctccaagtggagttggatggagctctggacttcttaaacgattgttacgtctctgttccgagagaggacagaggtccgacagtcatctcccgacaggtactaagtgaatgcaaggctgtgctccaggtgctgggaccctggtgtgcagacaaagcagcaggcatcatggtgcgggagctccagaagtacatcaaacacgaacagggggagcttcaccgcaaatttctgctcttcaccgacaccgttctcagaaaagtccacgccctttgtgaagaacatttctctcctgcctccttggacctcaagtttgtcacaccaaaggttctccgtctgctggaggtcctgcacgaatacaagccttttgagcgccagcagtttgagagcgtcgagtggtacaacaaccgcaatcaggacaattatgtgtcttggagtgattcggaggaagaagatgaggatgaagaagcggagaccaaagagcggcccgaagccaactttccttcgccgttcaccaacattctatgcggaattatatttgtggagaggcggtacacggcggtcgtcctaaatcgtcttatcaaagaagcgggaaagcaggacccagagttggcttacatcagcaacaactttattaccggccatagcattggcaggaatcagccgcggaacaagcagatggaggtggaattcagaaagcaagaggaggttctgcgcaaatttcgagctcacgaaaccaacctgctgattgccaccagcattgtggaggaaggtgtggacattccaaagtgtaacttggtggtgcgctttgacttgccgactgaatacaggtcctatgttcagtccaaaggcagagctcgagctcccgtctccaactatgttatgctggccgatagcgacaagaccacgtgctttgaaaatgatctgggtacctacaaggccattgaaaagatcttgaggaacaagtgctccaagtctgtggaggttggcgagtttgaaggagatcagcaagtgttggacgatgacaacatccttcctccgtatgtgcttcaatctgaggacggcggtcctcgggtcaccgttaacacggccatcggtcacattaataggtattgcgctcggctgccgagtgacccctttacccacttggctcccaagtgtaaaacggtggcgacgccagatggcagattccagtcgacgcttcatttacccatcaactccccgctcagagtgcctgttaagggtccaaaaatgaattgttccagattggcagagaaagcagttgccctactttgttgtgagaaactgcatcaaataggcgaactggatgatcatttgatgccagttgggaaggagacggtaaagtacgaggaagagctggaccttcacgatgaagaagaaacctgcgttcccggacggcctggctcgacaaagaggcgacagtgctacctgaaagctataccagagtgtctgcaggacagttttgctgtccaccagcatacttactacttgtacgtcatcggaatggttctcaccacaccgctcccggatgagctcaacttccggcgaaggaagctttacccaccggaggacagcactcgctgtttcggcatcctgacggctcaacccataccgcgaatcccccattttcctgtctacacgcgctcgggcgaggtgaccatctccatcgagctccagaagtgtggcttcaagctcaccgccgctgagctggagctcatcattcgcctgcaccagtacatcttctcccatatccttcgcttagagaaacctgcactggagttcaagcctacacttgctgactctgcttactgtgttctacctctcaatattgttggagattccaacacgttggatatggacttcaagttcatggaggatattgaaaggtctgaggcccgaactggcattccgactactcattacaccaagcaacagccgttcaacttcaagttggaggattaccaggatgctgtcatcattccaagaatatgagacatttgctgagtactacaaaaccaagtacaatctggatttatccaacctgaaccagccactcttggatgttgaccatacctcatccagactcaatctcttaacacctcgtcacctgaaccaaaaaggcaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]