LOCUS       XM_060080907            1277 bp    mRNA    linear   MAM 06-OCT-2023
DEFINITION  PREDICTED: Mesoplodon densirostris homeobox B8 (HOXB8), transcript
            variant X1, mRNA.
ACCESSION   XM_060080907
VERSION     XM_060080907.1
DBLINK      BioProject: PRJNA1021954
KEYWORDS    RefSeq.
SOURCE      Mesoplodon densirostris (Blainville's beaked whale)
  ORGANISM  Mesoplodon densirostris
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha;
            Cetacea; Odontoceti; Ziphiidae; Mesoplodon.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_082678) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_025265405.1-RS_2023_10
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 10/03/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Mesoplodon densirostris"
                     /mol_type="mRNA"
                     /isolate="mMesDen1"
                     /db_xref="taxon:48708"
                     /chromosome="18"
                     /sex="male"
                     /cell_type="cultured fribroblasts from skin"
                     /tissue_type="muscle"
                     /dev_stage="adult"
                     /country="USA: Florida, Melbourne Beach"
                     /lat_lon="27.883333 N 80.457294 W"
                     /collection_date="2011-01-11"
                     /collected_by="Judy St. Leger"
     gene            1..1277
                     /gene="HOXB8"
                     /note="homeobox B8; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 18 Proteins"
                     /db_xref="GeneID:132478098"
     CDS             1..732
                     /gene="HOXB8"
                     /codon_start=1
                     /product="homeobox protein Hox-B8 isoform X1"
                     /protein_id="XP_059936890.1"
                     /db_xref="GeneID:132478098"
                     /translation="

MSSYFVNSLFSKYKTGESLRPNYYDCGFAQDLGGRPTVVYGPSSGGSFQHPSQIQEFYHGPSSLSTAPYQQNPCAVACHGDPGNFYGYDPLQRQSLFGAQDPDLVQYADCKLAAASGLGEEAEGSEQSPSPTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKLERAPEAADEGDAQKGDKK"

ORIGIN      

atgagctcttatttcgtcaactcactgttctccaaatacaaaaccggggagtccctgcgccccaattattatgactgcggcttcgcccaggacctgggcggccgacccaccgtggtgtacggtcccagcagcggcggcagcttccagcacccgtcgcaaatccaggagttctaccacgggccgtcgtcgctatccacggctccctatcagcagaacccgtgcgccgtggcgtgccacggggacccgggcaacttctacggctacgacccgctgcagcggcagagcctgttcggtgcgcaggatccagacctggtgcagtacgcagactgcaagctcgccgccgccagcggcctgggggaggaggccgaggggtccgagcagagcccgtcgcccacacagctcttcccctggatgcgcccgcaagcagccgccggacgcaggcgaggccgacagacctacagccgctaccagaccctggagctggagaaggagttcctatttaatccctatctgactcgcaagcggcggatcgaggtatcgcatgcgctgggactgacagagagacaggtcaaaatctggttccagaaccggagaatgaagtggaaaaaagagaacaacaaagacaagttccccagcagcaaatgcgagcaggaggagctggagaaacagaagctggagcgggccccggaggcggcggacgaaggcgacgcgcagaagggcgacaagaagtaggctccagctgggactgccagggccgcggccgccctgcctccgcgtgtcacccgaccgcgctgccgtcgcccgcccccgcccgagagctctggccccgcgagcggggcccggagcctggcctcccaccgcagcgtccccgccgcgccagtccccgctagtggtagtttctcgtaatagcttctgtgtgtgagctaccgtggatctccttcccctctcttgggggccgggggggaaagaaaaggattttaagcaaggactccttctccctgctagggtgagcggctgcggcctggctgagccccacccccacgcccctgccccgtgtaaaaagcctccttgtgcaatggtcttttttcctttgaacgtgcttctttgtaatgagcgaggtactgatttctgctaagttctcccaacaacatgaaactgcctattcacgccgtaattctttctgtctccctctctctctctctctctctctctctctctctctctctctctctctctctctttcacctcgtcctcatttcccctcccacccccctccc

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