LOCUS       XM_058016310             992 bp    mRNA    linear   PLN 30-AUG-2023
DEFINITION  PREDICTED: Cryptomeria japonica leucine-rich repeat extensin-like
            protein 3 (LOC131078576), mRNA.
ACCESSION   XM_058016310
VERSION     XM_058016310.2
DBLINK      BioProject: PRJNA1009076
KEYWORDS    RefSeq.
SOURCE      Cryptomeria japonica (Japanese cedar)
  ORGANISM  Cryptomeria japonica
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Pinopsida; Pinidae; Conifers II; Cupressales;
            Cupressaceae; Cryptomeria.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081407) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 30, 2023 this sequence version replaced XM_058016310.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030272615.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/25/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Cryptomeria japonica"
                     /mol_type="mRNA"
                     /db_xref="taxon:3369"
                     /chromosome="3"
                     /country="Japan"
                     /collection_date="2017-05-09"
     gene            1..992
                     /gene="LOC131078576"
                     /note="leucine-rich repeat extensin-like protein 3;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 7 ESTs, 3 long SRA reads"
                     /db_xref="GeneID:131078576"
     CDS             102..689
                     /gene="LOC131078576"
                     /codon_start=1
                     /product="leucine-rich repeat extensin-like protein 3"
                     /protein_id="XP_057872293.2"
                     /db_xref="GeneID:131078576"
                     /translation="

MGGGSPTPSEDIIDMVLDDCEFQCEFRPLIRSAAAAAMPGMRRPLLLSHPHSPPRYYPHIPPPHCHNRHPIAAPPPPPPPHCHNHHPPTPPPPPPPPRHNHHPPAHPPPPPPPRHNHHPPAHPPPPPPPRHNHHPPAPPPPPPPPHHNYHPPAPPPPHHQMKQKHCGHCCLNAHHNNFAHPMPMTMAVPAPSPYH"

     polyA_site      992
                     /gene="LOC131078576"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

ctcttcaattgatgctcacgacccattctcttgtctctttgcatctgtgctacctaatttcttgtacagttttgcaagctgtgtttgttgaaggctgaaatatgggaggtggcagtcctactccatctgaagacattattgacatggttcttgacgactgtgagttccaatgtgagttccgacctttgatccgtagtgctgctgctgctgcgatgcctggaatgcggcgtcctctcttactttctcatcctcactctcctcctcgttattacccccacatacctcctcctcattgtcataatcgccacccaattgctgctcctcctccgccacctcctcctcattgtcataaccaccacccacctactcctcctccaccaccacctcctcctcgtcataaccaccacccacccgcacatcctccaccgccacctcctcctcgtcataaccaccacccacccgctcatcctccaccgccaccacctcctcgtcataaccaccacccacctgctcctcctccaccaccacctcctcctcatcataactaccacccacctgctcctcctcctcctcatcatcaaatgaagcagaagcattgtggccactgttgcttgaatgctcaccataacaattttgcccaccccatgcctatgactatggctgtgcctgccccttctccttatcattaacttgctatttctacagcacggtgttataatatatagtttggacttcttcttgattgaagaaaagaatacaagaagactcaggatgccacataggaggcagggaggctcttgtttgtttgtagttgggatgtttttgacagctaattagaataagtggccaccaagttccttggcctacataatcaagtgttttctagtatgtatatggtaacaaccatgatatttgcctttgggctgtactgcttttacatatatatggaatgatctatatcaggctaatacctgattacagttattgtttta

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