2024-05-19 06:53:44, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_056189312 258 bp mRNA linear PLN 19-MAY-2023 DEFINITION Lipomyces tetrasporus HAD-like domain-containing protein (POJ06DRAFT_268468), partial mRNA. ACCESSION XM_056189312 VERSION XM_056189312.1 DBLINK BioProject: PRJNA973627 BioSample: SAMN32935022 KEYWORDS RefSeq. SOURCE Lipomyces tetrasporus ORGANISM Lipomyces tetrasporus Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Lipomycetaceae; Lipomyces. REFERENCE 1 (bases 1 to 258) AUTHORS Jagtap,S.S., Liu,J.-J., Walukiewicz,H.E., Pangilinan,J., Lipzen,A., Ahrendt,S., Koriabine,M., Cobaugh,K., Salamov,A., Yoshinaga,Y., Ng,V., Daum,C., Grigoriev,I.V., Slininger,P.J., Dien,B.S., Jin,Y.-S. and Rao,C.V. CONSRTM Lawrence Berkeley National Laboratory TITLE Near-Complete genome sequence of Lipomyces tetrasporous NRRL Y-64009, an oleaginous yeast capable of growing on lignocellulosic hydrolysates JOURNAL Unpublished REFERENCE 2 (bases 1 to 258) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (17-MAY-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 258) AUTHORS Ahrendt,S., Jagtap,S.S., Liu,J.-J., Walukiewicz,H.E., Pangilinan,J., Lipzen,A., Koriabine,M., Cobaugh,K., Salamov,A., Yoshinaga,Y., Ng,V., Daum,C., Slininger,P.J., Dien,B.S., Jin,Y.-S., Rao,C.V. and Grigoriev,I.V. CONSRTM Lawrence Berkeley National Laboratory TITLE Direct Submission JOURNAL Submitted (23-MAR-2023) DOE Joint Genome Institute, 1 Cyclotron Road, Berkeley, CA 94720, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_026611601). ##Metadata-START## Organism Display Name :: Lipomyces tetrasporus NRRL Y-64009 v1.0 ##Metadata-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..258 /organism="Lipomyces tetrasporus" /mol_type="mRNA" /strain="NRRL Y-64009" /db_xref="taxon:54092" /chromosome="Unknown" gene <1..>258 /locus_tag="POJ06DRAFT_268468" /db_xref="GeneID:80884478" CDS 1..258 /locus_tag="POJ06DRAFT_268468" /codon_start=1 /product="HAD-like domain-containing protein" /protein_id="XP_056043032.1" /db_xref="GeneID:80884478" /db_xref="JGIDB:Liptet1_268468" /translation="
MTGDGVNDAPSLKAADIGVALGSGSDIAIEASDMVRLDKFDGIVEAVEYGRVVFDNLKKTVGYLLPAGSYAELWPVVTNVGLVFL"
misc_feature <1..231 /locus_tag="POJ06DRAFT_268468" /note="Haloacid Dehalogenase-like Hydrolases; Region: HAD_like; cl21460" /db_xref="CDD:451251" ORIGIN
atgactggtgacggtgttaacgacgctccgtcgctcaaggcagcggatattggcgtcgccctgggctccggcagtgacattgccatcgaagcatcagacatggtgcgcctggacaagttcgatggcattgttgaagctgttgaatacggccgtgtggtgtttgacaatctgaagaagacggtgggctatctcttaccggcagggtcctatgcagagttgtggcctgttgtcaccaacgtcggtttggtcttcctctga
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@meso_cacase at
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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