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2024-05-19 06:53:44, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_056189312             258 bp    mRNA    linear   PLN 19-MAY-2023
DEFINITION  Lipomyces tetrasporus HAD-like domain-containing protein
            (POJ06DRAFT_268468), partial mRNA.
ACCESSION   XM_056189312
VERSION     XM_056189312.1
DBLINK      BioProject: PRJNA973627
            BioSample: SAMN32935022
KEYWORDS    RefSeq.
SOURCE      Lipomyces tetrasporus
  ORGANISM  Lipomyces tetrasporus
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Saccharomycetes; Saccharomycetales; Lipomycetaceae; Lipomyces.
REFERENCE   1  (bases 1 to 258)
  AUTHORS   Jagtap,S.S., Liu,J.-J., Walukiewicz,H.E., Pangilinan,J., Lipzen,A.,
            Ahrendt,S., Koriabine,M., Cobaugh,K., Salamov,A., Yoshinaga,Y.,
            Ng,V., Daum,C., Grigoriev,I.V., Slininger,P.J., Dien,B.S.,
            Jin,Y.-S. and Rao,C.V.
  CONSRTM   Lawrence Berkeley National Laboratory
  TITLE     Near-Complete genome sequence of Lipomyces tetrasporous NRRL
            Y-64009, an oleaginous yeast capable of growing on lignocellulosic
            hydrolysates
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 258)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 258)
  AUTHORS   Ahrendt,S., Jagtap,S.S., Liu,J.-J., Walukiewicz,H.E.,
            Pangilinan,J., Lipzen,A., Koriabine,M., Cobaugh,K., Salamov,A.,
            Yoshinaga,Y., Ng,V., Daum,C., Slininger,P.J., Dien,B.S., Jin,Y.-S.,
            Rao,C.V. and Grigoriev,I.V.
  CONSRTM   Lawrence Berkeley National Laboratory
  TITLE     Direct Submission
  JOURNAL   Submitted (23-MAR-2023) DOE Joint Genome Institute, 1 Cyclotron
            Road, Berkeley, CA 94720, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_026611601).
            
            ##Metadata-START##
            Organism Display Name :: Lipomyces tetrasporus NRRL Y-64009 v1.0
            ##Metadata-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Lipomyces tetrasporus"
                     /mol_type="mRNA"
                     /strain="NRRL Y-64009"
                     /db_xref="taxon:54092"
                     /chromosome="Unknown"
     gene            <1..>258
                     /locus_tag="POJ06DRAFT_268468"
                     /db_xref="GeneID:80884478"
     CDS             1..258
                     /locus_tag="POJ06DRAFT_268468"
                     /codon_start=1
                     /product="HAD-like domain-containing protein"
                     /protein_id="XP_056043032.1"
                     /db_xref="GeneID:80884478"
                     /db_xref="JGIDB:Liptet1_268468"
                     /translation="
MTGDGVNDAPSLKAADIGVALGSGSDIAIEASDMVRLDKFDGIVEAVEYGRVVFDNLKKTVGYLLPAGSYAELWPVVTNVGLVFL"
     misc_feature    <1..231
                     /locus_tag="POJ06DRAFT_268468"
                     /note="Haloacid Dehalogenase-like Hydrolases; Region:
                     HAD_like; cl21460"
                     /db_xref="CDD:451251"
ORIGIN      
atgactggtgacggtgttaacgacgctccgtcgctcaaggcagcggatattggcgtcgccctgggctccggcagtgacattgccatcgaagcatcagacatggtgcgcctggacaagttcgatggcattgttgaagctgttgaatacggccgtgtggtgtttgacaatctgaagaagacggtgggctatctcttaccggcagggtcctatgcagagttgtggcctgttgtcaccaacgtcggtttggtcttcctctga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]